BAC Information

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BAC

Clone NameB6Ng01-091J20
Chromosome2 (Build37)
Map Location 153,370,387 - 153,534,460
singlet/doubletdoublet
Overlap geneCommd7, 7530422B04Rik, Dnmt3b, LOC668932
Upstream gene4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2, Id1, LOC629170, Cox4i2, Bcl2l1, Tpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik
Downstream geneMapre1, EG329541, LOC100043869, Spag4l, Bpil1, Bpil3, Rya3, LOC100043870, Gm1006, EG545477, Psp, LOC100043652, 1700058C13Rik, Plunc, 2310021H06Rik, U46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091J20.bB6Ng01-091J20.g
ACCDH903590DH903591
length877443
definitionDH903590|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J20, 5' end.DH903591|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(153,533,587 - 153,534,460)(153,370,387 - 153,370,835)
sequence
gaattccaggacagccagggctacacagagaaaccctgtctcaaaacaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaagagagagaga
gagagagagagagagattgcatatacatgaaattctcaaataattaataa
cattatattaaaattgttaaagcacaactagaggggctttcaagaagtct
gtgcccattcttgagtgggaaaggtccttgtcttaagtctccattccaca
agtgtctgcttagatctgcactaaatcttttgctaattaactcccacagt
gcttcattaattgcaaacaacaaactggacatgttgggcaatctttgaat
cccagcactcaggaggcaaaaactgatggacctcggtgaattcaagggta
ggctagtttacatagtgaattcgagatcaggaaggaagggttatatagtg
agaccctgtcttaaaacaaaactaaagcacaaagctacagttctagggag
tctgaagtggcacacagagaaaaaacttccacgggagctacccgtgagta
ggaaggcaccatgccacaatgcacacatgcaaggtcaatcgggtaattca
ctgatgctgctgatccctggttgtgcaatggatgcttgaaagtgagccca
ccctagtgcttaaatggcaaaaggcaggatacatgtctgcatatgaacag
aatatgtatgaataagaaaacaacattggaagggtgaggtggcacacacc
tttaatcccagcacttgagaggcagaggcaggaggatctctgtgagttca
aggccagcctgttttacagagtgagttctatcttgcatgaaaggaaggag
gaggaaggatggaaggaaggaaggaag
atgtttgcctgggtgaagtttatttcttttcaaaatggaagaagcacttg
gaaaggagattcacagcatctgtcccaggtcagtgagacgtatatcacag
agcaccacccccgactggccagagtgtgcctcagcagggccgccctgctt
tccccagcccctgccctggtgggaactaactctagacacagaaagtttcc
ccagtgtaggtgcagactcctccattgctaaactcggagagctctgagga
aggtcgatgccaactgtctgcaggggtcccgataccatccaggcttccag
aaggatactaggaaggttaggccacttgcctacaacaaattaagtccaag
aagggagggtacccagccttcttgacttcccatgtcagggtggaaaacat
gccatctgctcagagctgctggtagtggagggtgggggttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_153533587_153534460
seq2: B6Ng01-091J20.b_47_923 (reverse)

seq1  CTTCCTTCCTTCCTTCCTTCCTTCCT--TCCTTCCTTTCATGCTAGATAG  48
      ||||||||||||||||| ||||||||  ||||||||||||||| ||||||
seq2  CTTCCTTCCTTCCTTCCATCCTTCCTCCTCCTTCCTTTCATGCAAGATAG  50

seq1  AACTCACTCTGTAAAACAGGCTGGCCTTGAACTCACAGAGATCCTCCTGC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTCTGTAAAACAGGCTGGCCTTGAACTCACAGAGATCCTCCTGC  100

seq1  CTCTGCCTCTCAAGTGCTGGGATTAAAGGTGTGTGCCACCTCACCCTTCC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCTCAAGTGCTGGGATTAAAGGTGTGTGCCACCTCACCCTTCC  150

seq1  AATGTTGTTTTCTTATTCATACATATTCTGTTCATATGCAGACATGTATC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGTTTTCTTATTCATACATATTCTGTTCATATGCAGACATGTATC  200

seq1  CTGCCTTTTGCCATTTAAGCACTAGGGTGGGCTCACTTTCAAGCATCCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTTGCCATTTAAGCACTAGGGTGGGCTCACTTTCAAGCATCCAT  250

seq1  TGCACAACCAGGGATCAGCAGCATCAGTGAATTACCCGATTGACCTTGCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACCAGGGATCAGCAGCATCAGTGAATTACCCGATTGACCTTGCA  300

seq1  TGTGTGCATTGTGGCATGGTGCCTTCCTACTCACGGGTAGCTCCCGTGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCATTGTGGCATGGTGCCTTCCTACTCACGGGTAGCTCCCGTGGA  350

seq1  AGTCTTTTCTCTGTGTGCCACTTCAGACTCCCTAGAACTGTAGCTTTGTG  398
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTCTCTGTGTGCCACTTCAGACTCCCTAGAACTGTAGCTTTGTG  400

seq1  CTTTAGTTTTGTTTTAAGACAGGGTCTCACTATATAACCCTTCCTTCCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTTTGTTTTAAGACAGGGTCTCACTATATAACCCTTCCTTCCTG  450

seq1  ATCTCGAATTCACTATGTAAACTAGCCTACCCTTGAATTCACCGAGGTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCGAATTCACTATGTAAACTAGCCTACCCTTGAATTCACCGAGGTCC  500

seq1  ATCAGTCTCTGCCTCCTGAGTGCTGGGATTCAAAGATTGCCCAACATGTC  548
      |||||| | |||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTTTGCCTCCTGAGTGCTGGGATTCAAAGATTGCCCAACATGTC  550

seq1  CAGTTTGTTGTTTGCAATTAATGAAGCACTGTGGGAGTTAATTAGCAAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGTTGTTTGCAATTAATGAAGCACTGTGGGAGTTAATTAGCAAAA  600

seq1  GATTTAGTGCAGATCTAAGCAGACACTTGTGGAATGGAGACTTAAGACAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGTGCAGATCTAAGCAGACACTTGTGGAATGGAGACTTAAGACAA  650

seq1  GGACCTTTCCCACTCAAGAATGGGCACAGACTTCTTGAAAGCCCCTCTAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTTCCCACTCAAGAATGGGCACAGACTTCTTGAAAGCCCCTCTAG  700

seq1  TTGTGCTTTAACAATTTTAATATAATGTTATTAATTATTTGAGAATTTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTTAACAATTTTAATATAATGTTATTAATTATTTGAGAATTTCA  750

seq1  TGTATATGCAATCTCTCTCTCTCTCTCTCTCTCTCTCTTG-TTTTTTTTT  797
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGTATATGCAATCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTTTTTTTTT  800

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGAGACAGGGTTTCTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGAGACAGGGTTTCTC  850

seq1  TGTGTAGCCCTGGCTGTCCTGGAATTC  874
      |||||||||||||||||||||||||||
seq2  TGTGTAGCCCTGGCTGTCCTGGAATTC  877

seq1: chr2_153370387_153370835
seq2: B6Ng01-091J20.g_68_516

seq1  GAATTCATGTTTGCCTGGGTGAAGTTTATTTCTTTTCAAAATGGAAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTTGCCTGGGTGAAGTTTATTTCTTTTCAAAATGGAAGAAG  50

seq1  CACTTGGAAAGGAGATTCACAGCATCTGTCCCAGGTCAGTGAGACGTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGAAAGGAGATTCACAGCATCTGTCCCAGGTCAGTGAGACGTATA  100

seq1  TCACAGAGCACCACCCCCGACTGGCCAGAGTGTGCCTCAGCAGGGCCGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGCACCACCCCCGACTGGCCAGAGTGTGCCTCAGCAGGGCCGCC  150

seq1  CTGCTTTCCCCAGCCCCTGCCCTGGTGGGAACTAACTCTAGACACAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTCCCCAGCCCCTGCCCTGGTGGGAACTAACTCTAGACACAGAAA  200

seq1  GTTTCCCCAGTGTAGGTGCAGACTCCTCCATTGCTAAACTCGGAGAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCCAGTGTAGGTGCAGACTCCTCCATTGCTAAACTCGGAGAGCTC  250

seq1  TGAGGAAGGTCGATGCCAACTGTCTGCAGGGGTCCCGATACCATCCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGGTCGATGCCAACTGTCTGCAGGGGTCCCGATACCATCCAGGC  300

seq1  TTCCAGAAGGATACTAGGAAGGTTAGGCCACTTGCCTACAACAAATTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAAGGATACTAGGAAGGTTAGGCCACTTGCCTACAACAAATTAAG  350

seq1  TCCAAGAAGGGAGGGTACCCAGCCTTCTTGACTTCCCATGTCAGGGTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAAGGGAGGGTACCCAGCCTTCTTGACTTCCCATGTCAGGGTGGA  400

seq1  AAACATGCCATCTGCTCAGAGCTGCTGGTAGTGGAGGGTGGGGGTTGGG  449
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCCATCTGCTCAGAGCTGCTGGTAGTGGAGGGTGGGGGTTGGG  449