BAC Information

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BAC

Clone NameB6Ng01-091J21
Chromosome2 (Build37)
Map Location 136,407,703 - 136,408,827
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik, Pak7, LOC668910, LOC100043492, BC034902, Ankrd5
Downstream geneSnap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091J21.bB6Ng01-091J21.g
ACCDH903592DH903593
length1,1171,152
definitionDH903592|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J21, 5' end.DH903593|Mus musculus domesticus DNA, BAC clone: B6Ng01-091J21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaactccccaaagagaccacaagtagatacttaattaagcaa
gcaaattcaaacaagaacttggcacagcgccacacaaacagtccttgtca
atcttttcacatatcattgagcaattgtgttattccagcgaccaacagaa
ggatgtattgaatgttcaagagctggagttatgtaaccaatgcccagaaa
tgtgcaactgcctttccagttatcagagggtgactgctaatactcatcac
tctcctggcctatggataggttttgtttcctttatccctgtacagttatt
ttatcagatagaatttgttccaaaatttaaaagaaaaaagagagacattt
ctttaatttcaaagttcaaatcaaaattagcaaaatatccttagtggtca
ttattcgagcgtgtgcatgtgtgtatgtccttgggaatgtggattttggg
ttgcccaggaatagatagctcatctcaacgtggacaagtgagttgtgggc
attagctgtgctgccagaacgtgcctttctagaatcttgggtgagtgaac
ttcaaggatgcctcctagaatgcaggggctattacttgctttcattttgg
aaaatcagtcagcattagaagatgggagcctttagaaatcctgcttgatt
gcttgcaaggtttctctataaacagagtgtttaaaaaatcaccttttggg
gctagagagatggctcagaggtcaagtgcaatggctgctcttttagaggt
cctgggttcaattcccagcaaccacacaaccatatggtggcttgtaacca
tctacaatgagatcttgtgccctcttatgaacttcaggtatatatgcagg
cagaacactatgcataataaatagataaatcttaaacgaaaacaaacaga
aaaatacttttaaaaaatcacctttcatctattctttaagccccctcaat
ggatattatctcaggtcaggttcctttcaaagcataacttgagacaagaa
ttcaatttattaactaatttgggagcagattccaggaacatcagtagaag
tagagtgaaagcagatggagacaggcagtctccatgtgcactgcgataaa
tcttctctgggcattac
gaattctctgcttagatctgtaccccattttaattgggttatttagcttg
ttgatttcagtttcttaagttctttatatattttgtatatcagccctctg
tcaaatatctggttggtaaagatattttcccattctctaggctgctcttt
tgtccttttcaacgtcttctttgccttacagaacctttttagtttcatga
ggtccagtttattaattgttgatctttatgccagagatgttggtcttctg
ttcaggaacatgtcttctgtgcctatacattcaaggatattctccacttt
ctcttttcagatttggtgtatacagttttatgttgaggtctttaatctac
atgtactttagttttatgcagggtgatagatatggatctatttatattct
tctacattcagacatacagacagactggcaatatttgttgaagatgcctt
tgtatagtttggctttttaattttttttcaaaaatcaactgttcataagt
aaatgtggttacttctgggtctttgattcaattccattgatcaaccagcc
tgtctttatggcaatgtcgtgtggtttttattactattgctctgtagtac
agtttgaagtcatggatagtcatacctccagaagtccttttattgcacag
ggttgtttaagctttcctgagtttttgtttttccataggaagttgagtat
tattctataaagacttgtgttgaaattgtcatggtaattgtattgaatat
gtaggttgcttttggtaagatggctgttttttactgttaactctcctgat
ccatgagccttggagatttccatcttttgatatcttctttaattttattt
cctttgaggacttgaagttcttgtcaacatggctttcacttgcttgatta
gttataccagaatattttgtatacttgtggtaactgttaagggtgtgttt
cataattcttctatttatcatggtatatagacgatactgattttatttag
tttaatttgtataagcaacttgctgaaggtattatcaactatagttctct
gtaagattctgggcaactatgtaactatggagcaatctgtcatagcttga
cttgtcttccattctatctcctgaatcttgtgagtataccgtagccaata
cg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136407703_136408827
seq2: B6Ng01-091J21.b_44_1160 (reverse)

seq1  GTAATGCCCAGAGAAGATTTTATCTGGCAGTGCACATGGGGAGACTGCCT  50
      ||||||||||||||||| ||||||  |||||||||||  |||||||||||
seq2  GTAATGCCCAGAGAAGA-TTTATC--GCAGTGCACAT--GGAGACTGCCT  45

seq1  GTTCTCCATCTTGCTTTCACTCTAC-TCTACTGATGTTTCCTGGGATCTG  99
      | |||||||| |||||||||||||| |||||||||| ||||||| |||||
seq2  G-TCTCCATC-TGCTTTCACTCTACTTCTACTGATG-TTCCTGGAATCTG  92

seq1  CTCCCAAATTAGTTAATTAAATTTGAATTCTTGTCTCAAGTTATGCTTTG  149
      |||||||||||||||||  || ||||||||||||||||||||||||||||
seq2  CTCCCAAATTAGTTAAT--AAATTGAATTCTTGTCTCAAGTTATGCTTTG  140

seq1  AAAGGAACCTGACCTGAGATAATATCCATTGA-GGGGCTTAAAGAATAGA  198
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAGGAACCTGACCTGAGATAATATCCATTGAGGGGGCTTAAAGAATAGA  190

seq1  TGAAAGGTGATTTTTTAAAAGTATTTTTCTGTTTGTTTTCGTTTAAGATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTGATTTTTTAAAAGTATTTTTCTGTTTGTTTTCGTTTAAGATT  240

seq1  TATCTATTTATTATGCATAGTGTTCTGCCTGCATATATACCTGAAGTTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTTATTATGCATAGTGTTCTGCCTGCATATATACCTGAAGTTCA  290

seq1  TAAGAGGGCACAAGATCTCATTGTAGATGGTTACAAGCCACCATATGGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGGCACAAGATCTCATTGTAGATGGTTACAAGCCACCATATGGTT  340

seq1  GTGTGGTTGCTGGGAATTGAACCCAGGACCTCTAAAAGAGCAGCCATTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTTGCTGGGAATTGAACCCAGGACCTCTAAAAGAGCAGCCATTGC  390

seq1  ACTTGACCTCTGAGCCATCTCTCTAGCCCCAAAAGGTGATTTTTTAAACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACCTCTGAGCCATCTCTCTAGCCCCAAAAGGTGATTTTTTAAACA  440

seq1  CTCTGTTTATAGAGAAACCTTGCAAGCAATCAAGCAGGATTTCTAAAGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTATAGAGAAACCTTGCAAGCAATCAAGCAGGATTTCTAAAGGC  490

seq1  TCCCATCTTCTAATGCTGACTGATTTTCCAAAATGAAAGCAAGTAATAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTTCTAATGCTGACTGATTTTCCAAAATGAAAGCAAGTAATAGC  540

seq1  CCCTGCATTCTAGGAGGCATCCTTGAAGTTCACTCACCCAAGATTCTAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCATTCTAGGAGGCATCCTTGAAGTTCACTCACCCAAGATTCTAGA  590

seq1  AAGGCACGTTCTGGCAGCACAGCTAATGCCCACAACTCACTTGTCCACGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACGTTCTGGCAGCACAGCTAATGCCCACAACTCACTTGTCCACGT  640

seq1  TGAGATGAGCTATCTATTCCTGGGCAACCCAAAATCCACATTCCCAAGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGAGCTATCTATTCCTGGGCAACCCAAAATCCACATTCCCAAGGA  690

seq1  CATACACACATGCACACGCTCGAATAATGACCACTAAGGATATTTTGCTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACACATGCACACGCTCGAATAATGACCACTAAGGATATTTTGCTA  740

seq1  ATTTTGATTTGAACTTTGAAATTAAAGAAATGTCTCTCTTTTTTCTTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATTTGAACTTTGAAATTAAAGAAATGTCTCTCTTTTTTCTTTTA  790

seq1  AATTTTGGAACAAATTCTATCTGATAAAATAACTGTACAGGGATAAAGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGAACAAATTCTATCTGATAAAATAACTGTACAGGGATAAAGGA  840

seq1  AACAAAACCTATCCATAGGCCAGGAGAGTGATGAGTATTAGCAGTCACCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCTATCCATAGGCCAGGAGAGTGATGAGTATTAGCAGTCACCC  890

seq1  TCTGATAACTGGAAAGGCAGTTGCACATTTCTGGGCATTGGTTACATAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAACTGGAAAGGCAGTTGCACATTTCTGGGCATTGGTTACATAAC  940

seq1  TCCAGCTCTTGAACATTCAATACATCCTTCTGTTGGTCGCTGGAATAACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTCTTGAACATTCAATACATCCTTCTGTTGGTCGCTGGAATAACA  990

seq1  CAATTGCTCAATGATATGTGAAAAGATTGACAAGGACTGTTTGTGTGGCG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCTCAATGATATGTGAAAAGATTGACAAGGACTGTTTGTGTGGCG  1040

seq1  CTGTGCCAAGTTCTTGTTTGAATTTGCTTGCTTAATTAAGTATCTACTTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCAAGTTCTTGTTTGAATTTGCTTGCTTAATTAAGTATCTACTTG  1090

seq1  TGGTCTCTTTGGGGAGTTTCTGAATTC  1125
      |||||||||||||||||||||||||||
seq2  TGGTCTCTTTGGGGAGTTTCTGAATTC  1117