BAC Information

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BAC

Clone NameB6Ng01-091K03
Chromosome2 (Build37)
Map Location 23,111,862 - 23,112,983
singlet/doubletsinglet
Overlap gene4931423N10Rik
Upstream geneMyo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1, 1200016E24Rik, Acbd5, Mastl, Yme1l1, LOC664835
Downstream geneNxph2, LOC664822, 4921517N04Rik, LOC100039149, Sh3d2c-ps1, Hnmt, Tbpl2, Il1f8, LOC215253, Il1f9, Il1f6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091K03.bB6Ng01-091K03.g
ACCDH903604DH903605
length1,1171,251
definitionDH903604|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K03, 5' end.DH903605|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtcctgacttactttggtgatgaacagcaatgtggaggtgta
agctgaataaaccctttcctccccaatttgcttcttggtcatgatgtttt
gtccaggaatagaaaccctgactaatacatcccccaaggtctgttcaggg
cactggcccagaccaaaaggaacctgtgccactggtcaggcagagttcct
gggtgcctgggtatcactggtcatagttactccccagtgttggggcagat
gttgtgtcctcctcacctctgattatatgatcgagtttttttccttgatg
cttagttttgtatatatttttaatactttatatattctatatactaaccc
tctgtcagagggccatgaacttaagtgattaatttgaaagttacctatga
gaactccgtttttttcctaatttttcttggttttattatttgagttgtca
tattaccttttgctttttagcaaggggtaagaaatgtccacactggaggg
taataagttataattttaattttgtattactgagtattagttattaatta
tacaacattataaaatatcttatttcaaaatatatccagaaagtgattga
aatgcaagacccttttacaaccaatgaagcaagcgtggagaagacacaaa
cccgcagaccaggtaaattcagaaacaaactctgaaaataagttgtgtag
aatattgaagacaaactattcccatcatctttacgacttattagatttta
tgtaaaagatgcaggtggcactgccaacatccatactacaaagtaagtta
tatacaaccatgagaaaatatttttaaattgtagatattttcttttcata
tttataatattcatcctccccttttcctttccatctcctctactgtctct
gctccttcctcctccctctcatctttatgctttttctttaatatatatac
acatgcatgcattcacacatacaccaaatatatattaatgcaactgctca
gcccattcagtgttacacataacgtatatgttttaaggatgaccactgct
actaaataatggattatgggctaatctctgggaaaactgattccttctcc
atcagccatagttgctg
gaattcttcatactgattttcagagtggctgcaccaatttgcattcccac
tgacaataaatgaaggcccatttgagagatgtgggtctaattttatttct
cttttcaccaagctctatccagtatttgttgtcggttgctttgttgaact
tagctattctgtttgtggtgagaggaaatctcaaagtaatgttaattttc
ggctatctaattgataaaaataaggaaacttttagaggtatttcttagta
agttttatttctgcaaataaaaattttctgtttggaaccatagccaattt
ttaaaaattgggtcttttattttcttgattcactgtctttttagttccct
gtatattctggatatcaattctctgtcagatatataaaactgataaagat
tctttcccatttatgggtttcttctttactagattgattgtttcattagc
tgtacagaagatttttagttttataatgtttcaggagttggccttaattc
cttggctaatggaatacagttctgaaaatctgtttttacatttctatatt
gaaggttactgtctatgttttcttttagtagtttcactttttgaagtttc
atattgaggtctttgatggacttggatgtaatttttaaactgtttgagag
atgagggtctaattttatttttttctgcatgtagaaatacaattccccca
gaagcatttcttgaaagcattgtctcttgtctggtgtatgcttttttgtt
gtctttgtcaaatatgacatagttttaattataagtactctttatgtggg
tcttctattttatttcattggtcttcatgtctgttttttaacgctagtac
tctattattctaatttaaatagctctatcatatgtcttgaagtctggagt
agcattttctctagtgtcttccctcagcccctgcaggcagatgaattcac
aggaaaattatagcagatatctctgatttttgaaagtgtaggcacttaat
gctttaagatttttttaaggaggacttaattatatcacatgcattttggt
tcttatgttttattttcatttttaaatttttaaatcatctccttctaaaa
tttcattctctttctccaggaaccatctttcattcatgaacatatattcc
agaattgataccctcttagttacctaggtgactctgttatgagggagaat
atttgataaagaaccttctcacttccgaatattatgagacaccacatctc
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_23111862_23112983
seq2: B6Ng01-091K03.b_48_1164

seq1  GAATTCCAGTCCTGACTTACTTTGGTGATGAACAGCAATGTGGAGGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCCTGACTTACTTTGGTGATGAACAGCAATGTGGAGGTGTA  50

seq1  AGCTGAATAAACCCTTTCCTCCCCAATTTGCTTCTTGGTCATGATGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAATAAACCCTTTCCTCCCCAATTTGCTTCTTGGTCATGATGTTTT  100

seq1  GTCCAGGAATAGAAACCCTGACTAATACATCCCCCAAGGTCTGTTCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGAATAGAAACCCTGACTAATACATCCCCCAAGGTCTGTTCAGGG  150

seq1  CACTGGCCCAGACCAAAAGGAACCTGTGCCACTGGTCAGGCAGAGTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCCCAGACCAAAAGGAACCTGTGCCACTGGTCAGGCAGAGTTCCT  200

seq1  GGGTGCCTGGGTATCACTGGTCATAGTTACTCCCCAGTGTTGGGGCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCCTGGGTATCACTGGTCATAGTTACTCCCCAGTGTTGGGGCAGAT  250

seq1  GTTGTGTCCTCCTCACCTCTGATTATATGATCGAGTTTTTTTCCTTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTCCTCCTCACCTCTGATTATATGATCGAGTTTTTTTCCTTGATG  300

seq1  CTTAGTTTTGTATATATTTTTAATACTTTATATATTCTATATACTAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTTGTATATATTTTTAATACTTTATATATTCTATATACTAACCC  350

seq1  TCTGTCAGAGGGCCATGAACTTAAGTGATTAATTTGAAAGTTACCTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGAGGGCCATGAACTTAAGTGATTAATTTGAAAGTTACCTATGA  400

seq1  GAACTCCGTTTTTTTCCTAATTTTTCTTGGTTTTATTATTTGAGTTGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCGTTTTTTTCCTAATTTTTCTTGGTTTTATTATTTGAGTTGTCA  450

seq1  TATTACCTTTTGCTTTTTAGCAAGGGGTAAGAAATGTCCACACTGGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCTTTTGCTTTTTAGCAAGGGGTAAGAAATGTCCACACTGGAGGG  500

seq1  TAATAAGTTATAATTTTAATTTTGTATTACTGAGTATTAGTTATTAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTTATAATTTTAATTTTGTATTACTGAGTATTAGTTATTAATTA  550

seq1  TACAACATTATAAAATATCTTATTTCAAAATATATCCAGAAAGTGATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACATTATAAAATATCTTATTTCAAAATATATCCAGAAAGTGATTGA  600

seq1  AATGCAAGACCCTTTTACAACCAATGAAGCAAGCGTGGAGAAGACACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAGACCCTTTTACAACCAATGAAGCAAGCGTGGAGAAGACACAAA  650

seq1  CCCGCAGACCAGGTAAATTCAGAAACAAACTCTGAAAATAAGTTGTGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAGACCAGGTAAATTCAGAAACAAACTCTGAAAATAAGTTGTGTAG  700

seq1  AATATTGAAGACAAACTATTCCCATCATCTTTACGACTTATTAGATTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGAAGACAAACTATTCCCATCATCTTTACGACTTATTAGATTTTA  750

seq1  TGTAAAAGATGCAGGTGGCACTGCCAACATCCATACTACAAAGTAAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGATGCAGGTGGCACTGCCAACATCCATACTACAAAGTAAGTTA  800

seq1  TATACAACCATGAGAAAATATTTTTAAATTGTAGATATTTTCTTTTCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAACCATGAGAAAATATTTTTAAATTGTAGATATTTTCTTTTCATA  850

seq1  TTTATAATATTCATCCTCCCCTTTTCCTTTCCATCTCCTCTACTGTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATATTCATCCTCCCCTTTTCCTTTCCATCTCCTCTACTGTCTCT  900

seq1  GCTCCTTCCTCCTCCCTCTCATCTTTATGCTTTTTCTTTAATTATTATTA  950
      ||||||||||||||||||||||||||||||||||||||||| |||   ||
seq2  GCTCCTTCCTCCTCCCTCTCATCTTTATGCTTTTTCTTTAA-TAT--ATA  947

seq1  TACACATGCATGCATTCACACATACA-CAAATATATATTAATGCAACCTG  999
      |||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  TACACATGCATGCATTCACACATACACCAAATATATATTAATGCAA-CTG  996

seq1  CTCAGCCCATTCAGTGTTACACAT-ACGTATATGTTTTAAGGGATGACCA  1048
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  CTCAGCCCATTCAGTGTTACACATAACGTATATGTTTTAA-GGATGACCA  1045

seq1  CTTGCTACTAGATAATGGATTATGGGCTAATCTCTGGGGAAGACTGATTC  1098
      | |||||||| |||||||||||||||||||||||| ||||| ||||||||
seq2  C-TGCTACTAAATAATGGATTATGGGCTAATCTCT-GGGAAAACTGATTC  1093

seq1  TCTCT-CATCAGCCATTAGTTGCTG  1122
        ||| ||||||||| |||||||||
seq2  CTTCTCCATCAGCCA-TAGTTGCTG  1117