BAC Information

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BAC

Clone NameB6Ng01-092A21
Chromosome2 (Build37)
Map Location 157,233,142 - 157,368,720
singlet/doubletdoublet
Overlap geneSrc
Upstream geneLOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal
Downstream geneBlcap, Nnat, Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092A21.bB6Ng01-092A21.g
ACCDH903919DH903920
length1,110564
definitionDH903919|Mus musculus domesticus DNA, BAC clone: B6Ng01-092A21, 5' end.DH903920|Mus musculus domesticus DNA, BAC clone: B6Ng01-092A21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,367,615 - 157,368,720)(157,233,142 - 157,233,711)
sequence
gaattcacagataaatctgaaggaacttagtgtctttttcctgtgtgctc
acagagccctcccagcccagagagtatctcgtccctccagagaagatgcc
tgcttcctctgggtcagcttgccttctgtttcttggtggatttgaccctc
agtcctagtacagggtttccaggagctcagaacggctccctctgtgctcc
tgtttgcctgacccgtgttcgccacgctccatcccaacctttcactgatc
tgagagcttgctctgcacacacacaaagtaaacattctttctccctgggc
tcaaacacacaagcaccactaaatacagagctggcataattagctgaaaa
caaattagaatctctccaaatgacactttaattaaggaagcaaagcatga
agacattctccctgttagaggtggagtgatgtgagcccagctgctgtctc
ctgtaccagagtcctgcatcccatccctccacaggtttgtggatctgctt
cttgggcatgggtgctttgaaagagttccccatgctgagagcttgcctga
ggctgcatcttgactccctctagtatctttacaacacagccatgctggtc
cctgacattcttgctctttaacagagaagcacccgttcattccctcagtt
ctcctcctccatcagttggctctgactctactctgttttgagcaaccttc
tcttggcagtgaaggagaaataggatgctgggtctgcacgttttcacttt
tagcagacgtcaccattgcccgccatggtttctgaaccagacaaggatct
agccagaggcctcgagactttaatctctacactgtgagcagtcctcagta
tttgccaattggatgggtgaaaaagttaaatccctttttaaatttgtctt
ttcctgtttgccagtgagcttttcatgtgtacactgggcgtctgtattat
tcccgctccgaactgtcaattttttcttcgagctcttcagctcattgacc
tgtagaatgtcctgatgtaatccagatagtaagcttttgtgctttggaca
atgttttctcttgagcgtgtctgttgccttctcagctcactgtagaacct
ttgcttagac
acagagatcagcctgcctctgcctcctgagtgctggcattaaaggtgtgc
accagctttctaaactgtttttaactgcacacagtaggtccgctgtcaca
gtggctgaggtcctgcttagcttcctgtgtatggagcagcgttgctgctc
agttagtgctcttggaggacactatccctcgctttgagaggaccgagatg
tctctggggaaggaaatacacacacattcagttcccccagcttctgccca
ccaaggagaggcgccgtttggaaatccctttctgtccttagaagtcccca
gatgggtttcatgatctgtgttttcccgggaactggcaaaggatgccgtg
agtgagtcatcttttgcttggcttgtttcactctgagagcttggggtgct
acatgatgaccagtagcctgcctccagaaggcctcccttcccccacaggc
tggagcctgcaagttcctggaacagagtagtgggaagttctggagaccgt
aggggctagcacagctctgaatgaggacccagatgtcacattaatgggga
gggggatgtggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157367615_157368720
seq2: B6Ng01-092A21.b_39_1148 (reverse)

seq1  GTCTAAGGCAAGGTTCTACAGTGAGCTGAGA--GCAACAGACACGCTC-A  47
      |||||||  ||||||||||||||||||||||  ||||||||||||||| |
seq2  GTCTAAGCAAAGGTTCTACAGTGAGCTGAGAAGGCAACAGACACGCTCAA  50

seq1  GAGAAACATTTGTCCAAAAGCACAAAAGCTTACTATCTGGATTACATCAG  97
      ||||||   |||||| ||||||||||||||||||||||||||||||||||
seq2  GAGAAAACATTGTCC-AAAGCACAAAAGCTTACTATCTGGATTACATCAG  99

seq1  GACATTCTACAGGTCAATGAGCTGAAGAGCTCGA--GAAAAATTGACAGT  145
      ||||||||||||||||||||||||||||||||||   |||||||||||||
seq2  GACATTCTACAGGTCAATGAGCTGAAGAGCTCGAAGAAAAAATTGACAGT  149

seq1  TCGGAGCGGGAATAATACAGACGCCCAGTGTACACATGAAAAGCTCACTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGCGGGAATAATACAGACGCCCAGTGTACACATGAAAAGCTCACTG  199

seq1  GCAAACAGGAAAAGACAAATTTAAAAAGGGATTTAACTTTTTCACCCATC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAGGAAAAGACAAATTTAAAAAGGGATTTAACTTTTTCACCCATC  249

seq1  CAATTGGCAAATACTGAGGACTGCTCACAGTGTAGAGATTAAAGTCTCGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGCAAATACTGAGGACTGCTCACAGTGTAGAGATTAAAGTCTCGA  299

seq1  GGCCTCTGGCTAGATCCTTGTCTGGTTCAGAAACCATGGCGGGCAATGGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTGGCTAGATCCTTGTCTGGTTCAGAAACCATGGCGGGCAATGGT  349

seq1  GACGTCTGCTAAAAGTGAAAACGTGCAGACCCAGCATCCTATTTCTCCTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCTGCTAAAAGTGAAAACGTGCAGACCCAGCATCCTATTTCTCCTT  399

seq1  CACTGCCAAGAGAAGGTTGCTCAAAACAGAGTAGAGTCAGAGCCAACTGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCAAGAGAAGGTTGCTCAAAACAGAGTAGAGTCAGAGCCAACTGA  449

seq1  TGGAGGAGGAGAACTGAGGGAATGAACGGGTGCTTCTCTGTTAAAGAGCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAGGAGAACTGAGGGAATGAACGGGTGCTTCTCTGTTAAAGAGCA  499

seq1  AGAATGTCAGGGACCAGCATGGCTGTGTTGTAAAGATACTAGAGGGAGTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCAGGGACCAGCATGGCTGTGTTGTAAAGATACTAGAGGGAGTC  549

seq1  AAGATGCAGCCTCAGGCAAGCTCTCAGCATGGGGAACTCTTTCAAAGCAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCAGCCTCAGGCAAGCTCTCAGCATGGGGAACTCTTTCAAAGCAC  599

seq1  CCATGCCCAAGAAGCAGATCCACAAACCTGTGGAGGGATGGGATGCAGGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCAAGAAGCAGATCCACAAACCTGTGGAGGGATGGGATGCAGGA  649

seq1  CTCTGGTACAGGAGACAGCAGCTGGGCTCACATCACTCCACCTCTAACAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTACAGGAGACAGCAGCTGGGCTCACATCACTCCACCTCTAACAG  699

seq1  GGAGAATGTCTTCATGCTTTGCTTCCTTAATTAAAGTGTCATTTGGAGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATGTCTTCATGCTTTGCTTCCTTAATTAAAGTGTCATTTGGAGAG  749

seq1  ATTCTAATTTGTTTTCAGCTAATTATGCCAGCTCTGTATTTAGTGGTGCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATTTGTTTTCAGCTAATTATGCCAGCTCTGTATTTAGTGGTGCT  799

seq1  TGTGTGTTTGAGCCCAGGGAGAAAGAATGTTTACTTTGTGTGTGTGCAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTGAGCCCAGGGAGAAAGAATGTTTACTTTGTGTGTGTGCAGA  849

seq1  GCAAGCTCTCAGATCAGTGAAAGGTTGGGATGGAGCGTGGCGAACACGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTCTCAGATCAGTGAAAGGTTGGGATGGAGCGTGGCGAACACGGG  899

seq1  TCAGGCAAACAGGAGCACAGAGGGAGCCGTTCTGAGCTCCTGGAAACCCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAAACAGGAGCACAGAGGGAGCCGTTCTGAGCTCCTGGAAACCCT  949

seq1  GTACTAGGACTGAGGGTCAAATCCACCAAGAAACAGAAGGCAAGCTGACC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGGACTGAGGGTCAAATCCACCAAGAAACAGAAGGCAAGCTGACC  999

seq1  CAGAGGAAGCAGGCATCTTCTCTGGAGGGACGAGATACTCTCTGGGCTGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAGCAGGCATCTTCTCTGGAGGGACGAGATACTCTCTGGGCTGG  1049

seq1  GAGGGCTCTGTGAGCACACAGGAAAAAGACACTAAGTTCCTTCAGATTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTCTGTGAGCACACAGGAAAAAGACACTAAGTTCCTTCAGATTTA  1099

seq1  TCTGTGAATTC  1106
      |||||||||||
seq2  TCTGTGAATTC  1110

seq1: chr2_157233142_157233711
seq2: B6Ng01-092A21.g_68_637

seq1  GAATTCACAGAGATCAGCCTGCCTCTGCCTCCTGAGTGCTGGCATTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAGATCAGCCTGCCTCTGCCTCCTGAGTGCTGGCATTAAAG  50

seq1  GTGTGCACCAGCTTTCTAAACTGTTTTTAACTGCACACAGTAGGTCCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCACCAGCTTTCTAAACTGTTTTTAACTGCACACAGTAGGTCCGCT  100

seq1  GTCACAGTGGCTGAGGTCCTGCTTAGCTTCCTGTGTATGGAGCAGCGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGTGGCTGAGGTCCTGCTTAGCTTCCTGTGTATGGAGCAGCGTTG  150

seq1  CTGCTCAGTTAGTGCTCTTGGAGGACACTATCCCTCGCTTTGAGAGGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAGTTAGTGCTCTTGGAGGACACTATCCCTCGCTTTGAGAGGACC  200

seq1  GAGATGTCTCTGGGGAAGGAAATACACACACATTCAGTTCCCCCAGCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTCTCTGGGGAAGGAAATACACACACATTCAGTTCCCCCAGCTTC  250

seq1  TGCCCACCAAGGAGAGGCGCCGTTTGGAAATCCCTTTCTGTCCTTAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACCAAGGAGAGGCGCCGTTTGGAAATCCCTTTCTGTCCTTAGAAG  300

seq1  TCCCCAGATGGGTTTCATGATCTGTGTTTTCCCGGGAACTGGCAAAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGATGGGTTTCATGATCTGTGTTTTCCCGGGAACTGGCAAAGGAT  350

seq1  GCCGTGAGTGAGTCATCTTTTGCTTGGCTTGTTTCACTCTGAGAGCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGAGTGAGTCATCTTTTGCTTGGCTTGTTTCACTCTGAGAGCTTGG  400

seq1  GGTGCTACATGATGACCAGTAGCCTGCCTCCAGAAGGCCTCCCTTCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTACATGATGACCAGTAGCCTGCCTCCAGAAGGCCTCCCTTCCCCC  450

seq1  ACAGGCTGGAGCCTGCAAGTTCCTGGAACAGAGTAGTGGGAAGTTCTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTGGAGCCTGCAAGTTCCTGGAACAGAGTAGTGGGAAGTTCTGGA  500

seq1  GACCGTAGGGGCTAGCACAGCTCTGAATGAGGACCCAGATGTCACATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGTAGGGGCTAGCACAGCTCTGAATGAGGACCCAGATGTCACATTAA  550

seq1  TGGGGAGGGGGATGTGGAAC  570
      ||||||||||||||||||||
seq2  TGGGGAGGGGGATGTGGAAC  570