BAC Information

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BAC

Clone NameB6Ng01-092H21
Chromosome2 (Build37)
Map Location 78,087,150 - 78,088,235
singlet/doubletsinglet
Overlap geneLOC667920, OTTMUSG00000016703
Upstream geneLOC623706, LOC667906, Zfp533, BC003993
Downstream geneLOC383717, LOC100040476, LOC100040494, 4930401B11Rik, Ube2e3, LOC100040526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092H21.bB6Ng01-092H21.g
ACCDH904242DH904243
length1,0751,230
definitionDH904242|Mus musculus domesticus DNA, BAC clone: B6Ng01-092H21, 5' end.DH904243|Mus musculus domesticus DNA, BAC clone: B6Ng01-092H21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctgtgaatgtgtaaaggctcttcctcatcactcttctttcaa
gcttcaaaccttctaacactaacttgtccttgcctggcctgagagctgcc
atggtggctgagagctccaagcttcccccgatggattctggaaatctctc
atcctggttttccatgccagtttcccctaagttcacaaagagctgcacct
cagtggctacatggagttctagctagcatgctcttggctgtgtgtcttcc
attaagagtcttgtttctgatacacggctcatggattcgtttccttcggg
taactgaatctattggatggctctgaagtttctgtcacttcccaatggca
tttgcctttcccggccaccatttgtgtctgggtgtgggtgtcacagtcag
ctttggggtttcctaacagtgaatttccaagcctgttggaaattcctttc
gtctgtttttgctattgttacatctggctctcatcgcttataaatctcac
agtacagtgttaacatgatgacttcctgggaatcatttcttgccaatcta
taactagaaaattctctttttatttgcttttggttttccatgtccatggt
ttttcatttcttcctgttgatccattgtgtctcaccctgtgcgtgtgaag
aattccctcgtgagtttctttcctgtctctcagctagtgctcacattatg
tgcctgaaaagtacattttttacttttgttttttgagagatggttttgct
agatattttttttcagggttgacagaattgttttcttttcagcgattcac
agatgtcacgccgctgtctttcacttctcatagcttctgacaagaagttt
actcttctactcatctatgttcttaggctcggacacacctctctcctggc
agctgcgagattcctctttatctctgcttcactgcagtctgcctaccata
gcttgtatgttgggactactttaactttgtttaattttcactagtgttta
tcttactcctaaggtttttgtgttggttttttgtttgattcttggccaat
gtgtggtgagttccttaatagcctt
gaattctctgagtgtctatggcatgttacaagaaggcatacttatgccta
ggtgaaatggaaggagccacatactggcacatggcatggtcctgatcaga
tattcaatatgggaaagagagcatgtttgtgttcttttcccaggatgctg
aaggagcatgctagctgccagggtgtgacatgctgatgctaagacaaaga
atgatactgactgtgagctttcagagtgccaacggtgactgggaagctgt
ttttgacccacctttgcttgcctatatcccagattggtcaagctgccttg
cttcaagcttttagaccttgtgggacagagaacatggagactgccttcaa
aaacttgatcaaaaagagaagttatgatgactcttctcttttgtttgatg
tgaccatttattctgcctcaatcatagactggtctataaatcaatccaat
atttggaaataacagtcttcatttggaaggctgggtctggacagttttag
agacatttgaaagttagctacagttctctatgatgatgtattagcaatag
ataaaaattgggacagattctagatttcaaacaaatgttcatgcatgtgt
taaggctccaaatctgttattgattggtcatgttaaaattactttttctt
ccatagcatttaatgttgtatttaagttgtattgattgtactctttccaa
ttgtgttaaggcattgaaacctgtcatgtctgttatggtggtctatcaac
cagctttgttttattgcctgtgagtattacaggaccttagtattatgaaa
gaagcttgcagggactgggagaagagactttcaggaactcttcaataatt
atgtggagcacctggaatggaattctgtgctaccttctccccttccttga
cccagtccttggcttacgaattctactatcgctaggacctttttcttttt
aatagaattatggccttcacttggggattatagatgcattaaggcccaac
cttttgcagattcataccatcatctggcatgtcagaatctgggagaatgg
ttttgatgaaattctacaatggtctttaattaacccactcatacttgaaa
ctcagctttacgtgcgatggactggtagtcagtgatgtcaactgaagaag
taatctccgcttagatgatgaacctagagacagtaacccgctaagtgagg
gttctccctaatagtggagaaacataccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_78087150_78088235
seq2: B6Ng01-092H21.b_44_1118

seq1  GAATTCACCTGTGAATGTGTAAAGGCTCTTCCTCATCACTCTTCTTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGTGAATGTGTAAAGGCTCTTCCTCATCACTCTTCTTTCAA  50

seq1  GCTTCAAACCTTCTAACACTAACTTGTCCTTGCCTGGCCTGAGAGCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAAACCTTCTAACACTAACTTGTCCTTGCCTGGCCTGAGAGCTGCC  100

seq1  ATGGTGGCTGAGAGCTCCAAGCTTCCCCCGATGGATTCTGGAAATCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGCTGAGAGCTCCAAGCTTCCCCCGATGGATTCTGGAAATCTCTC  150

seq1  ATCCTGGTTTTCCATGCCAGTTTCCCCTAAGTTCACAAAGAGCTGCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGTTTTCCATGCCAGTTTCCCCTAAGTTCACAAAGAGCTGCACCT  200

seq1  CAGTGGCTACATGGAGTTCTAGCTAGCATGCTCTTGGCTGTGTGTCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCTACATGGAGTTCTAGCTAGCATGCTCTTGGCTGTGTGTCTTCC  250

seq1  ATTAAGAGTCTTGTTTCTGATACACGGCTCATGGATTCGTTTCCTTCGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAGTCTTGTTTCTGATACACGGCTCATGGATTCGTTTCCTTCGGG  300

seq1  TAACTGAATCTATTGGATGGCTCTGAAGTTTCTGTCACTTCCCAATGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAATCTATTGGATGGCTCTGAAGTTTCTGTCACTTCCCAATGGCA  350

seq1  TTTGCCTTTCCCGGCCACCATTTGTGTCTGGGTGTGGGTGTCACAGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTTCCCGGCCACCATTTGTGTCTGGGTGTGGGTGTCACAGTCAG  400

seq1  CTTTGGGGTTTCCTAACAGTGAATTTCCAAGCCTGTTGGAAATTCCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGGTTTCCTAACAGTGAATTTCCAAGCCTGTTGGAAATTCCTTTC  450

seq1  GTCTGTTTTTGCTATTGTTACATCTGGCTCTCATCGCTTATAAATCTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTTTGCTATTGTTACATCTGGCTCTCATCGCTTATAAATCTCAC  500

seq1  AGTACAGTGTTAACATGATGACTTCCTGGGAATCATTTCTTGCCAATCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGTGTTAACATGATGACTTCCTGGGAATCATTTCTTGCCAATCTA  550

seq1  TAACTAGAAAATTCTCTTTTTATTTGCTTTTGGTTTTCCATGTCCATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGAAAATTCTCTTTTTATTTGCTTTTGGTTTTCCATGTCCATGGT  600

seq1  TTTTCATTTCTTCCTGTTGATCCATTGTGTCTCACCCTGTGCGTGTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTCTTCCTGTTGATCCATTGTGTCTCACCCTGTGCGTGTGAAG  650

seq1  AATTCCCTCGTGAGTTTCTTTCCTGTCTCTCAGCTAGTGCTCACATTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTCGTGAGTTTCTTTCCTGTCTCTCAGCTAGTGCTCACATTATG  700

seq1  TGCCTGAAAAGTACATTTTTTACTTTTGTTTTTTGAGAGATGGTTTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGAAAAGTACATTTTTTACTTTTGTTTTTTGAGAGATGGTTTTGCT  750

seq1  AGATATTTTTTTTCAGGGTTGACAGAATTGTTTTCTTTTCAGCGATTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTTTTTTCAGGGTTGACAGAATTGTTTTCTTTTCAGCGATTCAC  800

seq1  AGATGTCACGCCGCTGTCTTTCACTTCTCATAGCTTCTGACAAGAAGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCACGCCGCTGTCTTTCACTTCTCATAGCTTCTGACAAGAAGTTT  850

seq1  ACTCTTCTACTCATCTATGTTCTTAGGCTCGGACACACCTCTCTCCTGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTACTCATCTATGTTCTTAGGCTCGGACACACCTCTCTCCTGGC  900

seq1  AGCTGCGAGATTTCCTCTTTATCTCTGCTTCACTGCAGTCTGCCTACCAT  950
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCGAGA-TTCCTCTTTATCTCTGCTTCACTGCAGTCTGCCTACCAT  949

seq1  AGCTTGTATGTTTGGACTTACTTTAACTTTGTTTAATTTTCACTAGGTGT  1000
      |||||||||||| |||| ||||||||||||||||||||||||||| ||||
seq2  AGCTTGTATGTTGGGAC-TACTTTAACTTTGTTTAATTTTCACTA-GTGT  997

seq1  TTATCTTACTCCTAGGTTTTTTGTGTTTTGTTTTTTGTTTTTGATTCTTG  1050
      |||||||||||||| | |||||||| || ||||||||  |||||||||||
seq2  TTATCTTACTCCTAAGGTTTTTGTG-TTGGTTTTTTG--TTTGATTCTTG  1044

seq1  GTCATATGTGTTGTGAGTTTCTTTTAATATAGCCTT  1086
      | || |||||| ||||||| |||     ||||||||
seq2  GCCA-ATGTGTGGTGAGTTCCTT----AATAGCCTT  1075