BAC Information

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BAC

Clone NameB6Ng01-092I02
Chromosome2 (Build37)
Map Location 123,095,092 - 123,235,575
singlet/doubletdoublet
Overlap genenone
Upstream geneDuox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4, Pldn, Sqrdl
Downstream gene4930517E11Rik, LOC100043360
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092I02.bB6Ng01-092I02.g
ACCDH904252DH904253
length7051,011
definitionDH904252|Mus musculus domesticus DNA, BAC clone: B6Ng01-092I02, 5' end.DH904253|Mus musculus domesticus DNA, BAC clone: B6Ng01-092I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,095,092 - 123,095,796)(123,234,564 - 123,235,575)
sequence
gaattctttaaggcataatagaaaatgtgacgcttctatagagggctcta
ctattggaaaactaacacataacaaagggaatcagctcattcattctgaa
aaaattatgagtgaccatagcctgggaatgggaattcaattttttttctg
aataaaatgttgcaatatgaaattggccacatgaaattttataggcacac
acacacacacacacacacacacacacacacacacacacaaatccttccat
ttaggtttggaaaaaactagcaatctgttaatgcttttcaaagctttcac
ttgatagttgaaagaacagtaggtcagacacagaggtagatgtggcacag
ctattaagggttttaaatacagcccaatataatctgtaacttttcaatgc
tccacactagctgtgttataaactaaccagccttgaattttttttacata
tggatattttattgttgttgttgttgttgtttgttttctttgggaacttc
agttcactattctaaaggagatataaaggaacagagagacattgaaggct
atttcccacattttagatagttctcttggtcttcttccctcttttcttta
tattttatctcctgtctttatctttcttgtcccttatatttgttttggat
ctgcagatatgcatgtggtatgtttggtatgtttgtgtgtgtgtgtgtgt
gtgtg
gaattctctctgcatgtcagaactcctctctcctctttccaagctagtag
gcttatttcctattcttaagctaataggccaaccgcttatttatttacag
gagatgctttcaaacagtacacaaaagattctctgtacacacatacataa
agattcacaccacacaaacacacagcacatacaaacatcacacatgcgca
aacttcatcttacaacttcttagctacatttgtctctctactttaatatt
ttatgttgatcaacttaataactaaaatgatctatttcatgaaaaattta
caaactgtattatacaacactatatgttttgttttaaatcttcttgtcct
ataagaagcatatactgatgtagaaatataggtctgcacacatagacata
cactctgtttttcacacttgtccacatgtgtgtgctttagaggaatagcc
attccttgccatggacagtgcttcttcgtgtgcagttttctttcaccctg
aatagctttatctgaaccacgaatgcagggttattgagacaggtcctcac
tgtgtagctcagaatagattccaaacactcaatgaccctcccacctcagc
ctcatgagtgctgataagattaaagtcatgtggtacctcccagccttcct
ccttttctcttagcactttaaaaataccttcaattttctctggttctcag
ttttgactaatgaggcattgtcttcattttgtagtttttttctaatttga
gagaaaggcccgtccttgtctttggattttgcggtttgactgagatgcat
gagattgtatgtgattttcattgtatttatattttccagctgctcataat
catctctgctcctaaattggtttcctgagaaatcttgcggagttttcagc
caccctttctcaattcgtttgttctagctctgttcattgcctcttccatg
tcttctgggactggcatgtgatgctggctggacctgctgtcacagctgtc
tgactgctgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_123095092_123095796
seq2: B6Ng01-092I02.b_46_750

seq1  GAATTCTTTAAGGCATAATAGAAAATGTGACGCTTCTATAGAGGGCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAGGCATAATAGAAAATGTGACGCTTCTATAGAGGGCTCTA  50

seq1  CTATTGGAAAACTAACACATAACAAAGGGAATCAGCTCATTCATTCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGAAAACTAACACATAACAAAGGGAATCAGCTCATTCATTCTGAA  100

seq1  AAAATTATGAGTGACCATAGCCTGGGAATGGGAATTCAATTTTTTTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATGAGTGACCATAGCCTGGGAATGGGAATTCAATTTTTTTTCTG  150

seq1  AATAAAATGTTGCAATATGAAATTGGCCACATGAAATTTTATAGGCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGTTGCAATATGAAATTGGCCACATGAAATTTTATAGGCACAC  200

seq1  ACACACACACACACACACACACACACACACACACACACAAATCCTTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACAAATCCTTCCAT  250

seq1  TTAGGTTTGGAAAAAACTAGCAATCTGTTAATGCTTTTCAAAGCTTTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTGGAAAAAACTAGCAATCTGTTAATGCTTTTCAAAGCTTTCAC  300

seq1  TTGATAGTTGAAAGAACAGTAGGTCAGACACAGAGGTAGATGTGGCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGTTGAAAGAACAGTAGGTCAGACACAGAGGTAGATGTGGCACAG  350

seq1  CTATTAAGGGTTTTAAATACAGCCCAATATAATCTGTAACTTTTCAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAGGGTTTTAAATACAGCCCAATATAATCTGTAACTTTTCAATGC  400

seq1  TCCACACTAGCTGTGTTATAAACTAACCAGCCTTGAATTTTTTTTACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTAGCTGTGTTATAAACTAACCAGCCTTGAATTTTTTTTACATA  450

seq1  TGGATATTTTATTGTTGTTGTTGTTGTTGTTTGTTTTCTTTGGGAACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTTATTGTTGTTGTTGTTGTTGTTTGTTTTCTTTGGGAACTTC  500

seq1  AGTTCACTATTCTAAAGGAGATATAAAGGAACAGAGAGACATTGAAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACTATTCTAAAGGAGATATAAAGGAACAGAGAGACATTGAAGGCT  550

seq1  ATTTCCCACATTTTAGATAGTTCTCTTGGTCTTCTTCCCTCTTTTCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCACATTTTAGATAGTTCTCTTGGTCTTCTTCCCTCTTTTCTTTA  600

seq1  TATTTTATCTCCTGTCTTTATCTTTCTTGTCCCTTATATTTGTTTTGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATCTCCTGTCTTTATCTTTCTTGTCCCTTATATTTGTTTTGGAT  650

seq1  CTGCAGATATGCATGTGGTATGTTTGGTATGTTTGTGTGTGTGTGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATATGCATGTGGTATGTTTGGTATGTTTGTGTGTGTGTGTGTGT  700

seq1  GTGTG  705
      |||||
seq2  GTGTG  705

seq1: chr2_123234564_123235575
seq2: B6Ng01-092I02.g_69_1079 (reverse)

seq1  GGCAGCAAGTCAGACAGCTGTGACAGCAGGTCCAGCCAGCATCACATGCC  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGC-AGTCAGACAGCTGTGACAGCAGGTCCAGCCAGCATCACATGCC  49

seq1  AGTCCCAGAAGACATGGAAGAGGCAATGAACAGAGCTAGAACAAAACGAA  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTCCCAGAAGACATGGAAGAGGCAATGAACAGAGCTAGAAC-AAACGAA  98

seq1  TTGAGAAAGGGTGGCTGAAAACTCCGCAAGATTTCTCAGGAAACCAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAGGGTGGCTGAAAACTCCGCAAGATTTCTCAGGAAACCAATTT  148

seq1  AGGAGCAGAGATGATTATGAGCAGCTGG-AAATATAAATACAATGAAAAT  199
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGGAGCAGAGATGATTATGAGCAGCTGGAAAATATAAATACAATGAAAAT  198

seq1  CACATACAATCTCATGCATCTCAGTCAAACCGCAAAATCCAAAGACAAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACAATCTCATGCATCTCAGTCAAACCGCAAAATCCAAAGACAAGG  248

seq1  ACGGGCCTTTCTCTCAAATTAGAAAAAAACTACAAAATGAAGACAATGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCCTTTCTCTCAAATTAGAAAAAAACTACAAAATGAAGACAATGCC  298

seq1  TCATTAGTCAAAACTGAGAACCAGAGAAAATTGAAGGTATTTTTAAAGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGTCAAAACTGAGAACCAGAGAAAATTGAAGGTATTTTTAAAGTG  348

seq1  CTAAGAGAAAAGGAGGAAGGCTGGGAGGTACCACATGACTTTAATCTTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGAAAAGGAGGAAGGCTGGGAGGTACCACATGACTTTAATCTTAT  398

seq1  CAGCACTCATGAGGCTGAGGTGGGAGGGTCATTGAGTGTTTGGAATCTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTCATGAGGCTGAGGTGGGAGGGTCATTGAGTGTTTGGAATCTAT  448

seq1  TCTGAGCTACACAGTGAGGACCTGTCTCAATAACCCTGCATTCGTGGTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCTACACAGTGAGGACCTGTCTCAATAACCCTGCATTCGTGGTTC  498

seq1  AGATAAAGCTATTCAGGGTGAAAGAAAACTGCACACGAAGAAGCACTGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGCTATTCAGGGTGAAAGAAAACTGCACACGAAGAAGCACTGTC  548

seq1  CATGGCAAGGAATGGCTATTCCTCTAAAGCACACACATGTGGACAAGTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAAGGAATGGCTATTCCTCTAAAGCACACACATGTGGACAAGTGT  598

seq1  GAAAAACAGAGTGTATGTCTATGTGTGCAGACCTATATTTCTACATCAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAGAGTGTATGTCTATGTGTGCAGACCTATATTTCTACATCAGT  648

seq1  ATATGCTTCTTATAGGACAAGAAGATTTAAAACAAAACATATAGTGTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTTCTTATAGGACAAGAAGATTTAAAACAAAACATATAGTGTTGT  698

seq1  ATAATACAGTTTGTAAATTTTTCATGAAATAGATCATTTTAGTTATTAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACAGTTTGTAAATTTTTCATGAAATAGATCATTTTAGTTATTAAG  748

seq1  TTGATCAACATAAAATATTAAAGTAGAGAGACAAATGTAGCTAAGAAGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAACATAAAATATTAAAGTAGAGAGACAAATGTAGCTAAGAAGTT  798

seq1  GTAAGATGAAGTTTGCGCATGTGTGATGTTTGTATGTGCTGTGTGTTTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATGAAGTTTGCGCATGTGTGATGTTTGTATGTGCTGTGTGTTTGT  848

seq1  GTGGTGTGAATCTTTATGTATGTGTGTACAGAGAATCTTTTGTGTACTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGAATCTTTATGTATGTGTGTACAGAGAATCTTTTGTGTACTGT  898

seq1  TTGAAAGCATCTCCTGTAAATAAATAAGCGGTTGGCCTATTAGCTTAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGCATCTCCTGTAAATAAATAAGCGGTTGGCCTATTAGCTTAAGA  948

seq1  ATAGGAAATAAGCCTACTAGCTTGGAAAGAGGAGAGAGGAGTTCTGACAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAATAAGCCTACTAGCTTGGAAAGAGGAGAGAGGAGTTCTGACAT  998

seq1  GCAGAGAGAATTC  1012
      |||||||||||||
seq2  GCAGAGAGAATTC  1011