BAC Information

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BAC

Clone NameB6Ng01-092J23
Chromosome2 (Build37)
Map Location 14,008,996 - 14,009,874
singlet/doubletsinglet
Overlap geneStam
Upstream geneRsu1, Cubn, Trdmt1, Vim, St8sia6, Ptpla
Downstream gene2010003H20Rik, Mrc1, Slc39a12, Cacnb2, LOC100041164, LOC625335, LOC625342, LOC100041220, Nsun6, Arl5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092J23.bB6Ng01-092J23.g
ACCDH904332DH904333
length8801,019
definitionDH904332|Mus musculus domesticus DNA, BAC clone: B6Ng01-092J23, 5' end.DH904333|Mus musculus domesticus DNA, BAC clone: B6Ng01-092J23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagccactatgccttgagatctccatgccaagatccaggtcag
aaacttgtatctcctagcctccagattaggatcactggtaagccttccaa
ttctggattgtagttcataccaggtatagtcaagttgacaaccaggaata
gccactatagagacagttaactaagaaagcctcgcttagaaagtgaaatt
tgaacagagtgcccaaaatgatgtgatggacatcaagaccttaaaatgcc
taagggaacattaacataagcaaagaaaatggcctatgaagctacagagg
cagaaatgtttggaaagttcaaatccaagatgcttcacatgatagcgaac
ccaaagttcacaaccatatatatctttagatattacatatagaaaattac
cagagatttttgaataggtagatgactttatccagtattttttaaaagat
taatggcttttataagtgaaaccttattagaggggcaaagagtaatgaaa
aatcctttcgcaaagcccctgccacagtttctgtgatagccaaaagctgg
aaacaacctagatcttctgcaacagaagaatggacacagaaaatgtggtt
tatttacataatggaatactactcagctattaagaatgaggacatcctga
gttttgcaggcaaatggatggaactagaaaatatcctgaatgaggcaact
cagacccatgtatggtatgtactcactaataagtggatattaaaaaaaaa
aaaaagtacagaatacccaagataaagttcacagaactcaaaaagctcaa
caagctgaagtgcccaagtaaggatgcctcagtcccacatgggagagagg
gaactgggagggaaagtgaatgggggaggg
gaattcctgatctttccagaacttttatcatgaatgggtgttgaatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaacagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttggtcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctccctttttcagttctgattttgttaa
ttaggattttgtctctgtgccctttagtgagtctagctaaggggtttatc
tatcttgttgattttctcaaagaaccaactcctcgtttgttaatttcttt
tgaaatagttcttctttgtttccaccttggttgatttcacccctgagttt
gattatttcctgccgtctactcctcttgggtgaatttgcttccttttttt
ctagagctttttagatgtgttgtcagctgctagtatgtgctctctcccgt
tttcttcatgggaggcactcagaggttatggagtttccttcttaagaata
gctttcattggtgtcccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_14008996_14009874
seq2: B6Ng01-092J23.b_47_926 (reverse)

seq1  CCCTCCCCCATTCACTTTCCCTCCCAGTTCCCTCTCTCCCATGTGGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCATTCACTTTCCCTCCCAGTTCCCTCTCTCCCATGTGGGACT  50

seq1  GAGGCATCCTTACTTGGGCACTTCAGCTTGTTGAGCTTTTTGAGTTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATCCTTACTTGGGCACTTCAGCTTGTTGAGCTTTTTGAGTTCTGT  100

seq1  GAACTTTATCTTGGGTATTCTGTAC-TTTTTTTTTTTTTAATATCCACTT  149
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAACTTTATCTTGGGTATTCTGTACTTTTTTTTTTTTTTAATATCCACTT  150

seq1  ATTAGTGAGTACATACCATACATGGGTCTGAGTTGCCTCATTCAGGATAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGAGTACATACCATACATGGGTCTGAGTTGCCTCATTCAGGATAT  200

seq1  TTTCTAGTTCCATCCATTTGCCTGCAAAACTCAGGATGTCCTCATTCTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTTCCATCCATTTGCCTGCAAAACTCAGGATGTCCTCATTCTTA  250

seq1  ATAGCTGAGTAGTATTCCATTATGTAAATAAACCACATTTTCTGTGTCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGAGTAGTATTCCATTATGTAAATAAACCACATTTTCTGTGTCCA  300

seq1  TTCTTCTGTTGCAGAAGATCTAGGTTGTTTCCAGCTTTTGGCTATCACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGTTGCAGAAGATCTAGGTTGTTTCCAGCTTTTGGCTATCACAG  350

seq1  AAACTGTGGCAGGGGCTTTGCGAAAGGATTTTTCATTACTCTTTGCCCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGGCAGGGGCTTTGCGAAAGGATTTTTCATTACTCTTTGCCCCT  400

seq1  CTAATAAGGTTTCACTTATAAAAGCCATTAATCTTTTAAAAAATACTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAGGTTTCACTTATAAAAGCCATTAATCTTTTAAAAAATACTGGA  450

seq1  TAAAGTCATCTACCTATTCAAAAATCTCTGGTAATTTTCTATATGTAATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCATCTACCTATTCAAAAATCTCTGGTAATTTTCTATATGTAATA  500

seq1  TCTAAAGATATATATGGTTGTGAACTTTGGGTTCGCTATCATGTGAAGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGATATATATGGTTGTGAACTTTGGGTTCGCTATCATGTGAAGCA  550

seq1  TCTTGGATTTGAACTTTCCAAACATTTCTGCCTCTGTAGCTTCATAGGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGATTTGAACTTTCCAAACATTTCTGCCTCTGTAGCTTCATAGGCC  600

seq1  ATTTTCTTTGCTTATGTTAATGTTCCCTTAGGCATTTTAAGGTCTTGATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTGCTTATGTTAATGTTCCCTTAGGCATTTTAAGGTCTTGATG  650

seq1  TCCATCACATCATTTTGGGCACTCTGTTCAAATTTCACTTTCTAAGCGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCACATCATTTTGGGCACTCTGTTCAAATTTCACTTTCTAAGCGAG  700

seq1  GCTTTCTTAGTTAACTGTCTCTATAGTGGCTATTCCTGGTTGTCAACTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTAGTTAACTGTCTCTATAGTGGCTATTCCTGGTTGTCAACTTG  750

seq1  ACTATACCTGGTATGAACTACAATCCAGAATTGGAAGGCTTACCAGTGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACCTGGTATGAACTACAATCCAGAATTGGAAGGCTTACCAGTGAT  800

seq1  CCTAATCTGGAGGCTAGGAGATACAAGTTTCTGACCTGGATCTTGGCATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCTGGAGGCTAGGAGATACAAGTTTCTGACCTGGATCTTGGCATG  850

seq1  GAGATCTCAAGGCATAGTGGCTATGAATTC  879
      ||||||||||||||||||||||||||||||
seq2  GAGATCTCAAGGCATAGTGGCTATGAATTC  880