BAC Information

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BAC

Clone NameB6Ng01-092N14
Chromosome2 (Build37)
Map Location 47,916,189 - 48,110,244
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457, LOC383692, Acvr2a, Orc4l, LOC100041508, Mbd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092N14.bB6Ng01-092N14.g
ACCDH904495DH904496
length350934
definitionDH904495|Mus musculus domesticus DNA, BAC clone: B6Ng01-092N14, 5' end.DH904496|Mus musculus domesticus DNA, BAC clone: B6Ng01-092N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,916,189 - 47,916,538)(48,109,303 - 48,110,244)
sequence
attactgtaattcccaaaaatatactctagataccatggagtatgtgcac
agccatccactggacagagcacagggtccccagtgaaggagctagagaaa
ggacccaaggagctgaaggggtttgcagccccataggaggaacaacaata
tgaactgaccagtacccccagagctccctgggactaaaccaccaaccaaa
gaaaacacatggtgggactcacggctctagctgcatgtgtagcagagaac
agcctagttggtcatcaatgagaggagaggccttggttctgtgaaggttc
tatgctccagtataggggaatgccaggatgggaatgggagtgggtgggtt

gaattctctgaactgaaacatagggaagattcaagatagtcctgagatta
gtcaagctttccagaaacagcaaagtagagttctggttgttctttgaaag
cacagcctcattttgtgtgagtgctccaaaatttgtagaccctacgcaac
gttctcagtgaaccctcacaacaatctcacaaggaaatgaaagattttaa
aaatatgaagaggcttccatatctgatcaaatatgtccaccagcttagat
gaaaacaaatttcatttctttaaaaaacaagttctgtatactgtgatctc
ctgtgcaatgcccttcaatctttaaaagagcactgctttttaataagctc
tagtctaaggtaatatatatatatatatatatatatatatatatatatat
atatatatatatatatataggaatagatcaatttacttcgggagcaacag
aatagaagccaaaggtcacaaactgtcggtttcatttattttctagactt
aaaatctattaattaagatttttttctctcaaagaacttcaggaaaaaat
tatttctacttttagagtttttaaaacgtctttttagtaaattatcttct
agttctactgagagaacaacatgtgtttcagagctgtaattatggtataa
attttttttcaatttccacgttttacagagcattggggctctgagtatct
accatactataatacaaatgattaattaataagtggctttacactacata
agatccactttgtctctttgggcatgggggtagatagacttattagggat
ttaccaactttcagcactgtcttgatcaatcagtttaatctttgattttt
atagtttcaattttcatgggatcccgccatgctctttctatctatatttc
atgtgctgtctcaagatacaatggctaatgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47916189_47916538
seq2: B6Ng01-092N14.b_54_403

seq1  ATTACTGTAATTCCCAAAAATATACTCTAGATACCATGGAGTATGTGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGTAATTCCCAAAAATATACTCTAGATACCATGGAGTATGTGCAC  50

seq1  AGCCATCCACTGGACAGAGCACAGGGTCCCCAGTGAAGGAGCTAGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCCACTGGACAGAGCACAGGGTCCCCAGTGAAGGAGCTAGAGAAA  100

seq1  GGACCCAAGGAGCTGAAGGGGTTTGCAGCCCCATAGGAGGAACAACAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAAGGAGCTGAAGGGGTTTGCAGCCCCATAGGAGGAACAACAATA  150

seq1  TGAACTGACCAGTACCCCCAGAGCTCCCTGGGACTAAACCACCAACCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGACCAGTACCCCCAGAGCTCCCTGGGACTAAACCACCAACCAAA  200

seq1  GAAAACACATGGTGGGACTCACGGCTCTAGCTGCATGTGTAGCAGAGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACACATGGTGGGACTCACGGCTCTAGCTGCATGTGTAGCAGAGAAC  250

seq1  AGCCTAGTTGGTCATCAATGAGAGGAGAGGCCTTGGTTCTGTGAAGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGTTGGTCATCAATGAGAGGAGAGGCCTTGGTTCTGTGAAGGTTC  300

seq1  TATGCTCCAGTATAGGGGAATGCCAGGATGGGAATGGGAGTGGGTGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCCAGTATAGGGGAATGCCAGGATGGGAATGGGAGTGGGTGGGTT  350

seq1: chr2_48109303_48110244
seq2: B6Ng01-092N14.g_69_1002 (reverse)

seq1  TTCCAATTAGCCATTGTATCTTGAGAGCAGC-CATGGAAAATATATGATA  49
      |||| ||||||||||||||||||||| |||| ||||  ||||||| ||||
seq2  TTCCCATTAGCCATTGTATCTTGAGA-CAGCACATG--AAATATA-GATA  46

seq1  GAATGAGCATGGCGGGATCCCAATGAAAATTTGGAAACTATAAAAATCAA  99
      ||| ||||||||||||||||| |||||||||  |||||||||||||||||
seq2  GAAAGAGCATGGCGGGATCCC-ATGAAAATT--GAAACTATAAAAATCAA  93

seq1  AGATTAAACTTGATTAGATTCAAGACAGTAGCTTGAAACTGCTGGTAAAT  149
      ||||||||| ||||| || |||||||||| || |||||  | ||||||||
seq2  AGATTAAAC-TGATT-GA-TCAAGACAGT-GC-TGAAA--GTTGGTAAAT  136

seq1  CCCTAATAAAAGTCTATCTACCCCCATG-CCAAAGAGACAAAGTGGATCT  198
      |||||||  ||||||||||||||||||| |||||||||||||||||||||
seq2  CCCTAAT--AAGTCTATCTACCCCCATGCCCAAAGAGACAAAGTGGATCT  184

seq1  TATGTAGTGTAAAGCCACTTATTAATTAATCATTTGTATTATAGTATGGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGTGTAAAGCCACTTATTAATTAATCATTTGTATTATAGTATGGT  234

seq1  AGATACTCAGAG-CCCAATGCTCTGTAAAACGTGGAAATTGAAAAAAAA-  296
      |||||||||||| |||||||||||||||||||||||||||||||||||| 
seq2  AGATACTCAGAGCCCCAATGCTCTGTAAAACGTGGAAATTGAAAAAAAAT  284

seq1  TTATA-CATAATTACAGCTCTGAAACACATGTTGTTCTCTCAGTAGAACT  345
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCATAATTACAGCTCTGAAACACATGTTGTTCTCTCAGTAGAACT  334

seq1  AG-AGATAATTTACT-AAAAGACGTTTT-AAAACTCTAAAAGTAGAAATA  392
      || |||||||||||| |||||||||||| |||||||||||||||||||||
seq2  AGAAGATAATTTACTAAAAAGACGTTTTAAAAACTCTAAAAGTAGAAATA  384

seq1  ATTTTTTCCTGAAGTTCTTTGAGAGAAAAAAATCTTAATTAATAGATTTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCTGAAGTTCTTTGAGAGAAAAAAATCTTAATTAATAGATTTT  434

seq1  AAGTCTAGAAAATAAATGAAACCGACAGTTTGTGACCTTTGGCTTCTATT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGAAAATAAATGAAACCGACAGTTTGTGACCTTTGGCTTCTATT  484

seq1  CTGTTGCTCCCGAAGTAAATTGATCAATTCCTGGAAGTGTATATATATAT  542
      ||||||||||||||||||||||||| ||||||  |  | |||||||||||
seq2  CTGTTGCTCCCGAAGTAAATTGATCTATTCCTATATATATATATATATAT  534

seq1  ATATATATATATATATATATATATATATATATATATATTACCTTAGACTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATTACCTTAGACTA  584

seq1  GAGCTTATTAAAAAGCAGTGCTCTTTTAAAGATTGAAGGGCATTGCACAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTATTAAAAAGCAGTGCTCTTTTAAAGATTGAAGGGCATTGCACAG  634

seq1  GAGATCACAGTATACAGAACTTGTTTTTTAAAGAAATGAAATTTGTTTTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCACAGTATACAGAACTTGTTTTTTAAAGAAATGAAATTTGTTTTC  684

seq1  ATCTAAGCTGGTGGACATATTTGATCAGATATGGAAGCCTCTTCATATTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGCTGGTGGACATATTTGATCAGATATGGAAGCCTCTTCATATTT  734

seq1  TTAAAATCTTTCATTTCCTTGTGAGATTGTTGTGAGGGTTCACTGAGAAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCTTTCATTTCCTTGTGAGATTGTTGTGAGGGTTCACTGAGAAC  784

seq1  GTTGCGTAGGGTCTACAAATTTTGGAGCACTCACACAAAATGAGGCTGTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCGTAGGGTCTACAAATTTTGGAGCACTCACACAAAATGAGGCTGTG  834

seq1  CTTTCAAAGAACAACCAGAACTCTACTTTGCTGTTTCTGGAAAGCTTGAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAAGAACAACCAGAACTCTACTTTGCTGTTTCTGGAAAGCTTGAC  884

seq1  TAATCTCAGGACTATCTTGAATCTTCCCTATGTTTCAGTTCAGAGAATTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCAGGACTATCTTGAATCTTCCCTATGTTTCAGTTCAGAGAATTC  934