BAC Information

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BAC

Clone NameB6Ng01-093A04
Chromosome2 (Build37)
Map Location 142,776,202 - 142,776,721
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093A04.bB6Ng01-093A04.g
ACCDH904617DH904618
length1,1681,029
definitionDH904617|Mus musculus domesticus DNA, BAC clone: B6Ng01-093A04, 5' end.DH904618|Mus musculus domesticus DNA, BAC clone: B6Ng01-093A04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacagaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccacaatacctcttctgggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
attcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggatctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttagtatacccgagatataagatacaatttgcaaaacacatgaaactgaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaattggac
acaatcacccatggaagtagttacagagacaaagtttggagctgagacaa
aaggatggaccatctagagactgccatatccagggatccatcccataatt
agcctccaaacgatgacaccattgcatacactagcaagcgtttgctgaaa
gtaccctgatatagctgtctcttgtgagactatgccggggtttagcaaac
acataagtggatgctcacagtcagctattggatggatcacagggtcctca
tggaggagctagagaaagtatccaaggagctaagagatctgcaccctgta
gtgcacaacattatgaactaccagtgcccttccccccccccccggagcct
ctgactcttagctgcatttgtatcaaagatgcctagtcgcatcctgagag
gagccatgaaaggcaacttaatgcccagtacagggaatgccaggccaaat
gggatggtggtacgagtg
gaattctttgttcagttctgagctccattttttaatggggttatttgact
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtca
ttttgtcttattgatggtgtgttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctttcccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggattgatgcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggtgttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactggtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccaatt
ttacaatgttgatcctgccatcccatgagcatgggagatctttccatctt
ctgagatcttctttatttcttttttcagagattggagtttttatcataca
gatctttcacttccttagttagagtcacgccaagatatttatatttttgt
gactattgagaaggtgttgtttccctaatttcttctcagcctgttattct
tgaatgaagaaaggccattgacttgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776202_142776721
seq2: B6Ng01-093A04.g_585_1096 (reverse)

seq1  CAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAA  50
      ||||||||||||||||||||||  || | |||||| ||||||||||| ||
seq2  CAAACAAGTCAATGGCCTTTCTTCATTC-AAGAAT-AACAGGCTGAG-AA  47

seq1  GAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATA  100
      |||||||||||||||||| ||||||||||||||||||| ||||| |||||
seq2  GAAATTAGGGAAACAACA-CCTTCTCAATAGTCACAAA-AATAT-AAATA  94

seq1  TCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACT  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACT  144

seq1  TCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAGGAT  200
       ||| |||||||| ||||||| |||||||||||||||||||||||| |||
seq2  CCAA-TCTCTGAAAAAAGAAA-TAAAGAAGATCTCAGAAGATGGAAAGAT  192

seq1  CTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTT  250
      |||||||||||||||  |||||||||||||||||||||| ||||||||||
seq2  CTCCCATGCTCATGGGATGGCAGGATCAACATTGTAAAATTGGCTATCTT  242

seq1  GCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTC  292

seq1  AATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAAC  342

seq1  AAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCTGG  400
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAAAACCTAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGG  392

seq1  TGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAA  442

seq1  AAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGA  500
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAACTGCATGGTACTGGTATAGAGACAGACCAGTAGACCAATGGAATAGA  492

seq1  ATTGAAGACCCAGAAATGAA  520
      ||||||||||||||||||||
seq2  ATTGAAGACCCAGAAATGAA  512