BAC Information

Click to search

BAC

Clone NameB6Ng01-093C15
Chromosome2 (Build37)
Map Location 127,885,671 - 128,011,685
singlet/doubletdoublet
Overlap geneAcoxl, Bcl2l11
Upstream geneAp4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1
Downstream geneLOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093C15.bB6Ng01-093C15.g
ACCDH904724DH904725
length957868
definitionDH904724|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C15, 5' end.DH904725|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,885,671 - 127,886,381)(128,010,818 - 128,011,685)
sequence
gaattctacaagatccaaaaagcaggatatgattgtaagatgtaaaattc
aatattcaacacaaagcttgtttgtacatcctctcagtaggcaacaggaa
aataaaagtcagtttatagtatactcacaaacatgagcatcttatatata
tatatatatatatatatatatatatatatatatatatattcagcagtgaa
aattccaaagcataaaagaccagtgcacaaaacactacataatatgcaca
gagtaagtcaagagatattaacaatggcaggacacatatcttgttagtgt
atgagacttaacgttgccatgagatgtcccacgcccccttcagagtcagc
tccacttcagtcaaaatcttggaaagagtgtttgtaaacttacaaactca
cttgacagtttatatggaaatgcaaatgatgtaaaatagcccacagaact
ttgaaaaaagtggaagtcactgagggctggtgccaactgatttcaaagcg
tgtgccgagactgtcctagtccaggcctgaggacgttggcaggaagttag
gcagaccggcagagcactgccaggcccacttagcccacatatttgcccac
tcaaattctcacatgaaataaattaaacaatgaggaggattttttcttta
aatagtgagaaaaagtagattctgaatgaaaaagaagcaagctgtggtct
gtttcttactccgtgcacaaatgtttattaaagaccaacatagacttgaa
tataatcaggggaactgtaaaatttccagagaaacagaaaagcatcacca
atatctactgggagccatggtaaacaaagatttcttagggaaacacagaa
agcaccaattgcttacattagctattgataaattgctgttgtctgaaaga
cacacatcagggcagaggcaaacactaaatctggggggagggggggaatt
acctgca
gaattcttgctaggacggtctcaggaatctgcccacaattatggctccag
tgtgaccctgagagagctatgctttcttctctacatagctcagcaaagca
gcccacaggcctgaaggaagggctccaaccagctcccttctctccattca
gacaggacacccaggaaagcctgtattcagaggaatgcacgatgatctaa
ggagcctggcagctattgtggggcttccacctcaactctgctctgaccct
aaaccactcagagtcctcaacatagccccatgtgtcacttgctctggtgg
agcactggtgaggagcttcagtcggagcagtggtgggagtagtagggcat
aagcaaagagttagggttacagaaggcctgtggtgaactgttaggtccca
cattccacacaatgccatccatgatggtcttgatgttacagaagagcaaa
ccggaggctgacaaatggttatctgtccagccacacaactgatggagaga
gaacagaactcatgcctgccctagcccaggctcattcctctacatcatac
acacctggctcatgggaggtgcctcacaaacatggctgaaaaaagacaaa
tggataaatccatgaaaggaggaatgagcccaccaggcacagccattact
caggataacctgcagaaggatacagaagatatgacaagaagtgtgtcaag
ctgggccagtgggatgggccaggctgggtcaggctggagagaaaaggtca
ttgcagagggtaggaagatgcctcacctaggagaagctgtgcccagaaga
ggtggctgcagtgggaacctggatcttctgcagcaagcctgtgtgtgtgt
gtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_127885671_127886381
seq2: B6Ng01-093C15.b_43_753

seq1  GAATTCTACAAGATCCAAAAAGCAGGATATGATTGTAAGATGTAAAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAAGATCCAAAAAGCAGGATATGATTGTAAGATGTAAAATTC  50

seq1  AATATTCAACACAAAGCTTGTTTGTACATCCTCTCAGTAGGCAACAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAACACAAAGCTTGTTTGTACATCCTCTCAGTAGGCAACAGGAA  100

seq1  AATAAAAGTCAGTTTATAGTATACTCACAAACATGAGCATCTTATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGTCAGTTTATAGTATACTCACAAACATGAGCATCTTATATATA  150

seq1  TATATATATATATATATATATATATATATATATATATATTCAGCAGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATTCAGCAGTGAA  200

seq1  AATTCCAAAGCATAAAAGACCAGTGCACAAAACACTACATAATATGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAAAGCATAAAAGACCAGTGCACAAAACACTACATAATATGCACA  250

seq1  GAGTAAGTCAAGAGATATTAACAATGGCAGGACACATATCTTGTTAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGTCAAGAGATATTAACAATGGCAGGACACATATCTTGTTAGTGT  300

seq1  ATGAGACTTAACGTTGCCATGAGATGTCCCACGCCCCCTTCAGAGTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACTTAACGTTGCCATGAGATGTCCCACGCCCCCTTCAGAGTCAGC  350

seq1  TCCACTTCAGTCAAAATCTTGGAAAGAGTGTTTGTAAACTTACAAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCAGTCAAAATCTTGGAAAGAGTGTTTGTAAACTTACAAACTCA  400

seq1  CTTGACAGTTTATATGGAAATGCAAATGATGTAAAATAGCCCACAGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAGTTTATATGGAAATGCAAATGATGTAAAATAGCCCACAGAACT  450

seq1  TTGAAAAAAGTGGAAGTCACTGAGGGCTGGTGCCAACTGATTTCAAAGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAGTGGAAGTCACTGAGGGCTGGTGCCAACTGATTTCAAAGCG  500

seq1  TGTGCCGAGACTGTCCTAGTCCAGGCCTGAGGACGTTGGCAGGAAGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCGAGACTGTCCTAGTCCAGGCCTGAGGACGTTGGCAGGAAGTTAG  550

seq1  GCAGACCGGCAGAGCACTGCCAGGCCCACTTAGCCCACATATTTGCCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCGGCAGAGCACTGCCAGGCCCACTTAGCCCACATATTTGCCCAC  600

seq1  TCAAATTCTCACATGAAATAAATTAAACAATGAGGAGGATTTTTTCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCTCACATGAAATAAATTAAACAATGAGGAGGATTTTTTCTTTA  650

seq1  AATAGTGAGAAAAAGTAGATTCTGAATGAAAAAGAAGCAAGCTGTGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGAGAAAAAGTAGATTCTGAATGAAAAAGAAGCAAGCTGTGGTCT  700

seq1  GTTTCTTACTC  711
      |||||||||||
seq2  GTTTCTTACTC  711

seq1: chr2_128010818_128011685
seq2: B6Ng01-093C15.g_68_935 (reverse)

seq1  ACACACACACACACACACACACACACACAGGCTTGCTGCAGAAGATCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACAGGCTTGCTGCAGAAGATCCAG  50

seq1  GTTCCCACTGCAGCCACCTCTTCTGGGCACAGCTTCTCCTAGGTGAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCACTGCAGCCACCTCTTCTGGGCACAGCTTCTCCTAGGTGAGGCA  100

seq1  TCTTCCTACCCTCTGCAATGACCTTTTCTCTCCAGCCTGACCCAGCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTACCCTCTGCAATGACCTTTTCTCTCCAGCCTGACCCAGCCTGG  150

seq1  CCCATCCCACTGGCCCAGCTTGACACACTTCTTGTCATATCTTCTGTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCCACTGGCCCAGCTTGACACACTTCTTGTCATATCTTCTGTATC  200

seq1  CTTCTGCAGGTTATCCTGAGTAATGGCTGTGCCTGGTGGGCTCATTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAGGTTATCCTGAGTAATGGCTGTGCCTGGTGGGCTCATTCCTC  250

seq1  CTTTCATGGATTTATCCATTTGTCTTTTTTCAGCCATGTTTGTGAGGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGGATTTATCCATTTGTCTTTTTTCAGCCATGTTTGTGAGGCAC  300

seq1  CTCCCATGAGCCAGGTGTGTATGATGTAGAGGAATGAGCCTGGGCTAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATGAGCCAGGTGTGTATGATGTAGAGGAATGAGCCTGGGCTAGGG  350

seq1  CAGGCATGAGTTCTGTTCTCTCTCCATCAGTTGTGTGGCTGGACAGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGAGTTCTGTTCTCTCTCCATCAGTTGTGTGGCTGGACAGATAA  400

seq1  CCATTTGTCAGCCTCCGGTTTGCTCTTCTGTAACATCAAGACCATCATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTCAGCCTCCGGTTTGCTCTTCTGTAACATCAAGACCATCATGG  450

seq1  ATGGCATTGTGTGGAATGTGGGACCTAACAGTTCACCACAGGCCTTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTGTGTGGAATGTGGGACCTAACAGTTCACCACAGGCCTTCTGT  500

seq1  AACCCTAACTCTTTGCTTATGCCCTACTACTCCCACCACTGCTCCGACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTAACTCTTTGCTTATGCCCTACTACTCCCACCACTGCTCCGACTG  550

seq1  AAGCTCCTCACCAGTGCTCCACCAGAGCAAGTGACACATGGGGCTATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCTCACCAGTGCTCCACCAGAGCAAGTGACACATGGGGCTATGTT  600

seq1  GAGGACTCTGAGTGGTTTAGGGTCAGAGCAGAGTTGAGGTGGAAGCCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTCTGAGTGGTTTAGGGTCAGAGCAGAGTTGAGGTGGAAGCCCCA  650

seq1  CAATAGCTGCCAGGCTCCTTAGATCATCGTGCATTCCTCTGAATACAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCTGCCAGGCTCCTTAGATCATCGTGCATTCCTCTGAATACAGGC  700

seq1  TTTCCTGGGTGTCCTGTCTGAATGGAGAGAAGGGAGCTGGTTGGAGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGGTGTCCTGTCTGAATGGAGAGAAGGGAGCTGGTTGGAGCCCT  750

seq1  TCCTTCAGGCCTGTGGGCTGCTTTGCTGAGCTATGTAGAGAAGAAAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGGCCTGTGGGCTGCTTTGCTGAGCTATGTAGAGAAGAAAGCAT  800

seq1  AGCTCTCTCAGGGTCACACTGGAGCCATAATTGTGGGCAGATTCCTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTCAGGGTCACACTGGAGCCATAATTGTGGGCAGATTCCTGAGA  850

seq1  CCGTCCTAGCAAGAATTC  868
      ||||||||||||||||||
seq2  CCGTCCTAGCAAGAATTC  868