BAC Information

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BAC

Clone NameB6Ng01-093G11
Chromosome2 (Build37)
Map Location 144,596,796 - 144,738,328
singlet/doubletdoublet
Overlap gene1700010M22Rik
Upstream genePcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1
Downstream geneSlc24a3, LOC627312, OTTMUSG00000015643, LOC433482, LOC100043810, Rin2, Nat5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093G11.bB6Ng01-093G11.g
ACCDH904905DH904906
length980656
definitionDH904905|Mus musculus domesticus DNA, BAC clone: B6Ng01-093G11, 5' end.DH904906|Mus musculus domesticus DNA, BAC clone: B6Ng01-093G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,737,786 - 144,738,328)(144,596,796 - 144,597,451)
sequence
gaattctccacattaaggagtaatttttctttttgtacatcttaattaaa
atataattatatcactatcaccactcccattccccttcctcccgttagcc
cctccaatattcatcctcattctctctcaaactcttagccacttttattt
attgttgttacgtatatgtaacacacatgcacacacacatacacatacac
acatacacaaaaacttctgagtacatttaatgttgcttgtgtgtatatga
tttccagactcatcgagttgcattgggtacccaaatagaaggttcatcct
tgggagggaatattttcccctttctcagcagggactaatgatctgtagtt
ctttgcctaggtaggaccctatgagattatttccccttctgctaccctat
ctattgctattattgttacctaggtcttgtttaggcagccatattgtttg
tgatgtagcttccctatcatttctagggaacataatctcacagcagactt
actactcctttggctcttacaatccttctacccctgttccatgatgtttc
ctgagcctttggtgcagaagatatgctgcagatctatctttgggagctga
gcaccccacaaccaattgattgctacatcatgaccaggtgtggttttttt
gtaatgctctttgtttgctacaaagagaatctgtttttgatatagaggga
gagatttatctatctatgggcataaggaaaagtgaagctatgtcccatgg
gctgacaatgctcccacaagagccatggactatctaacaaaaactccaat
acaaagtgtgagacacctccaagattttggtcacagtagtccaagtgatt
cccaaaacaacacaggctattttgtttccttgttgccttccaggggttat
gaagagaccatatgcttcagatgagagattcaaagattcaagctggatct
aacctgaaaaccccttcctgtgattagctc
gaattctttgtaaattcattggtgattcgagtccttataaaacagagcag
aagaacctcgaatcagaaactgggcaaacttcacaagttggacccctctc
aactgccataggaaagatatgggagactactgtttaaggggagtcagcct
tctaaagtgctgctgtgtttctatcctctcccgaggtctggacagcagag
cattcaattttggagttcctaaacagcagctttaaatacccattaggaaa
ttacctgttagtgtggcattttagactgctaagtctaagctaatagatta
ctttgggataatggatttgatatttataggggcttcttaataccctgctt
tgattctttaccagggatgagtgagcttcagggctccatccttgaacaga
aagtacagcgtgggtggtctcttgaaggggctgcggctgacaggccctct
gtcggagggagatggctcaggcttagatacaaaaacaactctttctttcg
gggagtaagagatctgtgggcagaggtagtatcagccacacagccacagt
gggtgacggaggcacggcaagtctgatggcctcgaggtgacaggaagaag
aatgcccaggcaaccaccagcaggttggtagcactgaggcgggggggtgg
gggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_144737786_144738328
seq2: B6Ng01-093G11.b_39_581 (reverse)

seq1  CATGGAACAGGGGTAGAAGGATTGTAAGAGCCAAAGGAGTAGTAAGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACAGGGGTAGAAGGATTGTAAGAGCCAAAGGAGTAGTAAGTCTG  50

seq1  CTGTGAGATTATGTTCCCTAGAAATGATAGGGAAGCTACATCACAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGATTATGTTCCCTAGAAATGATAGGGAAGCTACATCACAAACAA  100

seq1  TATGGCTGCCTAAACAAGACCTAGGTAACAATAATAGCAATAGATAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTGCCTAAACAAGACCTAGGTAACAATAATAGCAATAGATAGGGT  150

seq1  AGCAGAAGGGGAAATAATCTCATAGGGTCCTACCTAGGCAAAGAACTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGGGGAAATAATCTCATAGGGTCCTACCTAGGCAAAGAACTACA  200

seq1  GATCATTAGTCCCTGCTGAGAAAGGGGAAAATATTCCCTCCCAAGGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTAGTCCCTGCTGAGAAAGGGGAAAATATTCCCTCCCAAGGATGA  250

seq1  ACCTTCTATTTGGGTACCCAATGCAACTCGATGAGTCTGGAAATCATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTATTTGGGTACCCAATGCAACTCGATGAGTCTGGAAATCATATA  300

seq1  CACACAAGCAACATTAAATGTACTCAGAAGTTTTTGTGTATGTGTGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGCAACATTAAATGTACTCAGAAGTTTTTGTGTATGTGTGTATG  350

seq1  TGTATGTGTGTGTGCATGTGTGTTACATATACGTAACAACAATAAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTGTGTGCATGTGTGTTACATATACGTAACAACAATAAATAAA  400

seq1  AGTGGCTAAGAGTTTGAGAGAGAATGAGGATGAATATTGGAGGGGCTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTAAGAGTTTGAGAGAGAATGAGGATGAATATTGGAGGGGCTAAC  450

seq1  GGGAGGAAGGGGAATGGGAGTGGTGATAGTGATATAATTATATTTTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAGGGGAATGGGAGTGGTGATAGTGATATAATTATATTTTAATT  500

seq1  AAGATGTACAAAAAGAAAAATTACTCCTTAATGTGGAGAATTC  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTACAAAAAGAAAAATTACTCCTTAATGTGGAGAATTC  543

seq1: chr2_144596796_144597451
seq2: B6Ng01-093G11.g_70_725

seq1  GAATTCTTTGTAAATTCATTGGTGATTCGAGTCCTTATAAAACAGAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTAAATTCATTGGTGATTCGAGTCCTTATAAAACAGAGCAG  50

seq1  AAGAACCTCGAATCAGAAACTGGGCAAACTTCACAAGTTGGACCCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCTCGAATCAGAAACTGGGCAAACTTCACAAGTTGGACCCCTCTC  100

seq1  AACTGCCATAGGAAAGATATGGGAGACTACTGTTTAAGGGGAGTCAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCATAGGAAAGATATGGGAGACTACTGTTTAAGGGGAGTCAGCCT  150

seq1  TCTAAAGTGCTGCTGTGTTTCTATCCTCTCCCGAGGTCTGGACAGCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGTGCTGCTGTGTTTCTATCCTCTCCCGAGGTCTGGACAGCAGAG  200

seq1  CATTCAATTTTGGAGTTCCTAAACAGCAGCTTTAAATACCCATTAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATTTTGGAGTTCCTAAACAGCAGCTTTAAATACCCATTAGGAAA  250

seq1  TTACCTGTTAGTGTGGCATTTTAGACTGCTAAGTCTAAGCTAATAGATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGTTAGTGTGGCATTTTAGACTGCTAAGTCTAAGCTAATAGATTA  300

seq1  CTTTGGGATAATGGATTTGATATTTATAGGGGCTTCTTAATACCCTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGATAATGGATTTGATATTTATAGGGGCTTCTTAATACCCTGCTT  350

seq1  TGATTCTTTACCAGGGATGAGTGAGCTTCAGGGCTCCATCCTTGAACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTTACCAGGGATGAGTGAGCTTCAGGGCTCCATCCTTGAACAGA  400

seq1  AAGTACAGCGTGGGTGGTCTCTTGAAGGGGCTGCGGCTGACAGGCCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAGCGTGGGTGGTCTCTTGAAGGGGCTGCGGCTGACAGGCCCTCT  450

seq1  GTCGGAGGGAGATGGCTCAGGCTTAGATACAAAAACAACTCTTTCTTTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGAGGGAGATGGCTCAGGCTTAGATACAAAAACAACTCTTTCTTTCG  500

seq1  GGGAGTAAGAGATCTGTGGGCAGAGGTAGTATCAGCCACACAGCCACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTAAGAGATCTGTGGGCAGAGGTAGTATCAGCCACACAGCCACAGT  550

seq1  GGGTGACGGAGGCACGGCAAGTCTGATGGCCTCGAGGTGACAGGAAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACGGAGGCACGGCAAGTCTGATGGCCTCGAGGTGACAGGAAGAAG  600

seq1  AATGCCCAGGCAACCACCAGCAGGTTGGTAGCACTGAGGCGGGGGGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCCAGGCAACCACCAGCAGGTTGGTAGCACTGAGGCGGGGGGGTGG  650

seq1  GGGGGG  656
      ||||||
seq2  GGGGGG  656