BAC Information

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BAC

Clone NameB6Ng01-093P21
Chromosome2 (Build37)
Map Location 121,526,625 - 121,527,593
singlet/doubletsinglet
Overlap geneFrmd5
Upstream geneStard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76
Downstream geneCasc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord, Duox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093P21.bB6Ng01-093P21.g
ACCDH905328DH905329
length1,245970
definitionDH905328|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P21, 5' end.DH905329|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacaacaattcctggcctttgcatcctttgacctaattggccac
ctactttcaggtgcattcacatgtccttaacactcttcagcaataacaaa
ccttttatacagaagatggctggaacagtgatccagaaccctgagccacc
atcccgtaatgattgctgggactttagagatagtcttggcaaagcacttg
gaaactcagttgaatcagatgatcatggaagtccataaggaagttaaata
taagcaaagtctcttatgttagcctcaattgtttcttccatagaacaatg
ttggctacagtgctaggaaatgaagcactatcatagagcttcaccaatcc
tcagtcattctctctgagccattccactcccacacccactcctcttccat
ggagttcccatcatttgcccacccataacgaacttgctggggctggctca
tgctgtgcagccctgcccagggccaacgaggagtaattcccctctttccc
tctgccctgctgctcaggctggttccttgggtcaaatttgttctgggttg
gcactgttgtctctctgtctgccacacctcgctgcttagagaggctttga
atgggcaagcagttcccactcctgacatatcctttcataggagagaaagg
tctggagggataattgtccactcctggggcaggtttgaacttctgctcct
tttatcatggatgcttttataaatttctcggcaggctttaaagccttcca
gatgttcattagcacagaatttagcttttttgttaattttttccttagga
actttgggcttgatgcaaaactttgccacatttgcttttttagtaaaccc
agatagacctttttcctctgttttgctttcctcttccctctaggttgctc
tctcactttaaggacattgctatttgtagacatgttggtctaagccattt
acacctccaagcctttttctacttcataaagattgtcccaccaaagggct
cagcaagctgctaagctctcattgccagtcttgctgtccttactgaaatc
cagctcttttgtcttctggtaaactgccctctctcggaccttgtgaacct
gaaatcttcattggccttcctttaaatccagattcccctcagtccttgga
tctgtcctatatccttaaggtctctagtcccttgaatactagtgactctc
ggcttgggatgaaccatggacacctcattagggcgcgggtctcac
gaattcctgttctctgctccccacagtctcccttcagcctttgggaacct
actcaacctaggggaaggtcctgggttacttcctgggggttctacatgtt
aacggtgagaatgattcacagttcagaaagccacggtttctgggtttcca
acatccacaacaccccacgggcagaggcgggcagaggtgacctttgacct
tggcttggtttttatcaactagtttgataaaaccagaaaaaaatgagacc
ctggccttaagaagcctagcctgctctttaaaatcttcatctggttctgc
ttcaggtaagtggtagattttgatgtttcatgctccgtttcacccagaat
cccattctccagctgctcaggttcccacggagtgaaaaatgtcggctttc
ccagtgacaggcctgtcattcagctcgttgtatatcactttcataaatgc
agcatccaagggcttctacccatgtgcaccctgttatcagtgatgtgccc
tctcatcgtgcagggagcattcaaactgctcagcagggtaggagacaact
attcaagcggtccttgtagtggctggcgtctccataaataggtgtccact
accatctgaggccccagggacaatctgagtggagatcagtcaggaacagg
gtgtttatgagagctgattttcctagacctgagtcaccaagcaccatcag
gtgtgaactggaatcccaaactactgtggtttctctctctttttcttttt
ttttttgagcttcattgggaaaatttgcaagaccaacataggtagaagtt
tctggatttacaaactgagttggctgttgcttagacatcgtcttgatttt
tgttgttttgtttgtttgtttggtcataccaccacaccagtcaagtagtc
aaacgttaagcttatattctcagacacccttctcttttaaacttcttgtg
tgtggggtgttttgttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_121526625_121527593
seq2: B6Ng01-093P21.g_67_1036

seq1  GAATTCCTGTTCTCTGCTCCCCACAGTCTCCCTTCAGCCTTTGGGAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTCTCTGCTCCCCACAGTCTCCCTTCAGCCTTTGGGAACCT  50

seq1  ACTCAACCTAGGGGAAGGTCCTGGGTTACTTCCTGGGGGTTCTACATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACCTAGGGGAAGGTCCTGGGTTACTTCCTGGGGGTTCTACATGTT  100

seq1  AACGGTGAGAATGATTCACAGTTCAGAAAGCCACGGTTTCTGGGTTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGTGAGAATGATTCACAGTTCAGAAAGCCACGGTTTCTGGGTTTCCA  150

seq1  ACATCCACAACACCCCACGGGCAGAGGCGGGCAGAGGTGACCTTTGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCACAACACCCCACGGGCAGAGGCGGGCAGAGGTGACCTTTGACCT  200

seq1  TGGCTTGGTTTTTATCAACTAGTTTGATAAAACCAGAAAAAAATGAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGGTTTTTATCAACTAGTTTGATAAAACCAGAAAAAAATGAGACC  250

seq1  CTGGCCTTAAGAAGCCTAGCCTGCTCTTTAAAATCTTCATCTGGTTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTAAGAAGCCTAGCCTGCTCTTTAAAATCTTCATCTGGTTCTGC  300

seq1  TTCAGGTAAGTGGTAGATTTTGATGTTTCATGCTCCGTTTCACCCAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTAAGTGGTAGATTTTGATGTTTCATGCTCCGTTTCACCCAGAAT  350

seq1  CCCATTCTCCAGCTGCTCAGGTTCCCACGGAGTGAAAAATGTCGGCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCTCCAGCTGCTCAGGTTCCCACGGAGTGAAAAATGTCGGCTTTC  400

seq1  CCAGTGACAGGCCTGTCATTCAGCTCGTTGTATATCACTTTCATAAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGACAGGCCTGTCATTCAGCTCGTTGTATATCACTTTCATAAATGC  450

seq1  AGCATCCAAGGGCTTCTACCCATGTGCACCCTGTTATCAGTGATGTGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCAAGGGCTTCTACCCATGTGCACCCTGTTATCAGTGATGTGCCC  500

seq1  TCTCATCGTGCAGGGAGCATTCAAACTGCTCAGCAGGGTAGGAGACAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCGTGCAGGGAGCATTCAAACTGCTCAGCAGGGTAGGAGACAACT  550

seq1  ATTCAAGCGGTCCTTGTAGTGGCTGGCGTCTCCATAAATAGGTGTCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCGGTCCTTGTAGTGGCTGGCGTCTCCATAAATAGGTGTCCACT  600

seq1  ACCATCTGAGGCCCCAGGGACAATCTGAGTGGAGATCAGTCAGGAACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTGAGGCCCCAGGGACAATCTGAGTGGAGATCAGTCAGGAACAGG  650

seq1  GTGTTTATGAGAGCTGATTTTCCTAGACCTGAGTCACCAAGCACCATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATGAGAGCTGATTTTCCTAGACCTGAGTCACCAAGCACCATCAG  700

seq1  GTGTGAACTGGAATCCCAAACTACTGTGGTTTCTCTCTCTTTTTC-TTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGTGAACTGGAATCCCAAACTACTGTGGTTTCTCTCTCTTTTTCTTTTT  750

seq1  TTTTTTGAGCTTCATTGGGAAAATTTGCAAGACCAACATAGGTAGAAGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGCTTCATTGGGAAAATTTGCAAGACCAACATAGGTAGAAGTT  800

seq1  TCTGGATTTACAAACTGAGTTGGCTGTTGCTTAGACATCGTCTTGATTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTTACAAACTGAGTTGGCTGTTGCTTAGACATCGTCTTGATTTT  850

seq1  TGTTTGTTTGTTTGTTTGTTTTGGTCAATACACCAACACCAGTCAAGTAG  899
      ||||  |||||||||||| ||||||| ||||  | |||||||||||||||
seq2  TGTTGTTTTGTTTGTTTG-TTTGGTC-ATACCACCACACCAGTCAAGTAG  898

seq1  TCAAACGTTAAGC-TATATTCTCAGACACCCTTCTCTTTTAAACTCTTGG  948
      ||||||||||||| |||||||||||||||||||||||||||||||  | |
seq2  TCAAACGTTAAGCTTATATTCTCAGACACCCTTCTCTTTTAAACTTCTTG  948

seq1  TGTGTGGGGTG-TTTGTTTTGT  969
      ||||||||||| ||||||||||
seq2  TGTGTGGGGTGTTTTGTTTTGT  970