BAC Information

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BAC

Clone NameB6Ng01-094A18
Chromosome2 (Build37)
Map Location 142,776,426 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094A18.bB6Ng01-094A18.g
ACCDH905368DH905369
length9841,125
definitionDH905368|Mus musculus domesticus DNA, BAC clone: B6Ng01-094A18, 5' end.DH905369|Mus musculus domesticus DNA, BAC clone: B6Ng01-094A18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgacaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttgcaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatctgtaggaaaatgttattggaggacagtcaactttattaggta
tttctcagttgtaatgttttatcttaagaaaacagattagtcaacataaa
atatagagaaaattcattaaaactaaaaaataga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccaacaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcctaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatgaaaggagttacagagacaaagtttggagctgaaatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaatattttatcaaaa
ggacccagatgtagctgtctcttgtagactatgccagggcctagcaacac
agaagtggatgctcacagtcagctaatggatggatcacagggctccatga
gagctagagaagtaccgaggagctaagggatctgcaccctataggtggac
acattatgactacagtacccgagctcttgactctagctgctatgtatcaa
agatgcctatcagccatactggaagagagtcattgacatgtactgatgct
cagtaggacgccaggccaaagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776426_142777698
seq2: B6Ng01-094A18.b_48_860 (reverse)

seq1  ATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAA  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATCAACATTGCAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAA  50

seq1  TGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAG  100

seq1  CAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGT  150

seq1  CTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAA  200

seq1  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAG  250

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  300

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAG  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  350

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  400

seq1  CATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  450
      |||||||||||||| |||| ||||||| | ||||||||||||||||||||
seq2  CATGTAGAAGAATGCGAATTGATCCATTCCTATCTCCTTGTACTAAGGTC  450

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  500

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACA  550
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  550

seq1  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  600

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  650

seq1  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  700

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  750

seq1  GTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||  
seq2  GTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAA--  798

seq1  CCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  850
                ||| |||||    |||                        
seq2  --------CTGAACAAAGA----ATTC-----------------------  813

seq1  TGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTG  900
                                                        
seq2  --------------------------------------------------  813

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  950
                                                        
seq2  --------------------------------------------------  813

seq1  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGC  1000
                                                        
seq2  --------------------------------------------------  813

seq1  ACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATC  1050
                                                        
seq2  --------------------------------------------------  813

seq1  GAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  1100
                                                        
seq2  --------------------------------------------------  813

seq1  AAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATC  1150
                                                        
seq2  --------------------------------------------------  813

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  1200
                                                        
seq2  --------------------------------------------------  813

seq1  ACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGG  1250
                                                        
seq2  --------------------------------------------------  813

seq1  GCTCAGAACTGAACAAAGAATTC  1273
                             
seq2  -----------------------  813


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