BAC Information

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BAC

Clone NameB6Ng01-094B23
Chromosome2 (Build37)
Map Location 7,276,169 - 7,300,586
singlet/doubletdoublet
Overlap genenone
Upstream geneUsp6nl, LOC100040387, Cugbp2, LOC100040659
Downstream geneLOC100040648, LOC672230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094B23.bB6Ng01-094B23.g
ACCDH905425DH905426
length1,074900
definitionDH905425|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B23, 5' end.DH905426|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,276,169 - 7,277,228)(7,299,686 - 7,300,586)
sequence
gaattcttagctcctcattctatttataccctggattaaggcactggtca
gttcgtttatttatttaatcttattgattgcaatacaagtttatttgtac
gtatattttatgtttatgggtgttacttttgagctgaacatgaagacatc
agatcctgcagtggttgtgaccgccatgtgattgctgggatttgaactca
agatctatgagaaagcccccaatgagcttaatccctgagccgtctctttg
gatggatttgtttatttcttaaaaggaaaatgatagtattttttctgttt
tccaagatgcttgctgaatataccgactgtgacgtccaagagagactcga
ttcaacacataactactgaacgttgactttctgggattcttactgatgct
cccagaagaggggagtgatatagctctgcatccgacagtattttcatgca
tcagaaaaggaggatctgtgagtagaaaccatgaacaaaccaacagtgag
agcaacaagtatttgcatgtgtcctactgtgtgttgccaattatgcgaaa
tggttgacttacacttactcacatattttcttacaagcttggaagagtgt
aatatatacatccatgtttcacagtaaggttaaacaggacagagtgaaat
agcctattggaagtcacatggcagaacctgcatttaggctcagtggaggt
aggcaaaggatgtaggggtcagcagcagaggtagtgttgatattagcgag
atgttccaccctctgcaggagactcctcctttaaatgttgaacttgtcct
cacagccccactcttttctttttttggacccttttcttctttgtggctta
tttctaacaaaccacagaggaatctaattctggtctctatctctatctct
atctctgtctctgtcctctgtccctgtctctggtctctggtctctgtctc
tggctctactctctctaatatataatatatatttaatatctatatttata
ttggatatatcacctatatcctattataatgggaatatgcagaatacata
tatggtatatatatacacacacac

gaattctttatgtttatgtagcatctcttcccagaatactcccaggagtg
ttgtggtgattttcactggagttaactgcctctgtactattcatttctaa
aatgggcctaagagcataagtcctacagtctcatcataaccaaaatgaac
aggaggcttacttgtatccagaaatatgaagcctggtgattccaatgtgg
agaaatacatgcacaaaagtgaaatctaccctctcgttgacattcatgat
cagaaaatttctagctctgtacttagcatagataagccaaaatgcatcat
cctaagatgatttcattgtttatattggagaacagagtgagacttgaatc
atagagacacaaaataattatatttgacattgaagtgttttttatagcct
ttccagtattaaaatcttggccctactggaaaggccagagatacatatat
agatgaaaaatcagagaagtgagggttctaagattcttgacactaaattt
tccctaggcaaaacattaaaaacaggaacagtgatcaaatatcaaaaaca
caaagatgaagaactcagaacttttccttttgttagtactttagccacaa
agaacacacacagaaggagaaagggagagagaggcttacatatttctcct
tataatgatttttatagtccatgatttaactctatgtgatctagacctaa
caattattaaacaccagagcaatgaagagtgcctcccccagaagcatatc
ctgtgtctttgattcagaattatttacagagttcccactgttacatactg
cttatgcactgttcattgttttagactatgaagatttttataatgcacta
taaattaaacagcctgagcctggtgccctggagtttgtatcttcttttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_7276169_7277228
seq2: B6Ng01-094B23.b_43_1116

seq1  GAATTCTTAAGCTCCTTATTCTATTTATACCCTGGATTAAGGCACTGGTC  50
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  GAATTCTT-AGCTCCTCATTCTATTTATACCCTGGATTAAGGCACTGGTC  49

seq1  AGTTCAGTTATTTATTTAATCTTATTTATTTCAATACAAGTTTATTTGTA  100
      |||||  ||||||||||||||||||| ||| |||||||||||||||||||
seq2  AGTTCGTTTATTTATTTAATCTTATTGATTGCAATACAAGTTTATTTGTA  99

seq1  CGTATATTTTATGTATATGGGTGTTACTTTTGAGCAGAAGATGAGGACAT  150
      |||||||||||||| |||||||||||||||||||| ||| |||| |||||
seq2  CGTATATTTTATGTTTATGGGTGTTACTTTTGAGCTGAACATGAAGACAT  149

seq1  CAGATCCTGCAGTGGTTGTGACCGCCATGTGATTGCTGGGATTTGAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCTGCAGTGGTTGTGACCGCCATGTGATTGCTGGGATTTGAACTC  199

seq1  AGGATCTCTGAGAGAGCCACCAATGAGCTTAATCACTGAGCCATCTCTTT  250
      | ||||| ||||| |||| ||||||||||||||| ||||||| |||||||
seq2  AAGATCTATGAGAAAGCCCCCAATGAGCTTAATCCCTGAGCCGTCTCTTT  249

seq1  GGATGGATTTGTTTATTTCTTAAAAGGAAAATGAGAGTATTTTTTCTGTT  300
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGATGGATTTGTTTATTTCTTAAAAGGAAAATGATAGTATTTTTTCTGTT  299

seq1  TTCCAAGATGCTTCATGAATATACCGACTGTGACATCAGACAGTGACTCA  350
      |||||||||||||  ||||||||||||||||||| ||  | || ||||| 
seq2  TTCCAAGATGCTTGCTGAATATACCGACTGTGACGTCCAAGAGAGACTCG  349

seq1  TTTCAACACATAGCTACTGAAGGCTGACGTTCACAGTCTCATACTGATGC  400
       ||||||||||| |||||||| | |||| |||   |  || |||||||||
seq2  ATTCAACACATAACTACTGAACGTTGACTTTCTGGGATTCTTACTGATGC  399

seq1  TTCAGGAAGAGGGCAGTGATATAGCTCTGCATACGACAGTATTTTCATGC  450
      | |  |||||||| |||||||||||||||||| |||||||||||||||||
seq2  TCCCAGAAGAGGGGAGTGATATAGCTCTGCATCCGACAGTATTTTCATGC  449

seq1  ACCAGAAAAGGAGGATCTGTGAGTAGAAACCATGAA-AAACCAGCAGTGA  499
      | |||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  ATCAGAAAAGGAGGATCTGTGAGTAGAAACCATGAACAAACCAACAGTGA  499

seq1  GAGCAACAAGTATTTTCATGTGTCCTACTGTGTGTTGCCAAGTATGCAGA  549
      ||||||||||||||| ||||||||||||||||||||||||| |||||  |
seq2  GAGCAACAAGTATTTGCATGTGTCCTACTGTGTGTTGCCAATTATGCGAA  549

seq1  ATGGTTGACTTACACTTCCTCACATATTTTCTTACAAGCTTTGAAGAGTG  599
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  ATGGTTGACTTACACTTACTCACATATTTTCTTACAAGCTTGGAAGAGTG  599

seq1  TAATAGAATCATCCATGTTTCACAGTTAGGTAAACCAGGACAGAGTGAAA  649
      ||||| |  ||||||||||||||||| |||| || |||||||||||||||
seq2  TAATATATACATCCATGTTTCACAGTAAGGTTAAACAGGACAGAGTGAAA  649

seq1  TAGCCTATTGGAAGTCACATGGCAGAACCTGCATTTAGGCTCAGTGGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTATTGGAAGTCACATGGCAGAACCTGCATTTAGGCTCAGTGGAGG  699

seq1  TAGGCAAAGGATGTAGGGGTCAGCAGCAGAGGTAGTGTTGATATTAGCGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAAGGATGTAGGGGTCAGCAGCAGAGGTAGTGTTGATATTAGCGA  749

seq1  GATGTTCCACCCTCTGCAGGAGACTCCTCCTTTAAATGTTGAACTTGTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCCACCCTCTGCAGGAGACTCCTCCTTTAAATGTTGAACTTGTCC  799

seq1  TCACAG-CCCACTCTTTTC-TTTTTTGGACCC-TTTCTTCTTTGTGGCTT  846
      |||||| |||||||||||| |||||||||||| |||||||||||||||||
seq2  TCACAGCCCCACTCTTTTCTTTTTTTGGACCCTTTTCTTCTTTGTGGCTT  849

seq1  A-TTCT-ACAAACCACAGAGGAATCTATTTCT-GTCTCTATCTCTATCTC  893
      | |||| |||||||||||||||||||| |||| |||||||||||||||||
seq2  ATTTCTAACAAACCACAGAGGAATCTAATTCTGGTCTCTATCTCTATCTC  899

seq1  TATCTCTGTCTCTGT-CTCTGTCTCTGTCTCT-GTCTCT-GTCTCTGTCT  940
      ||||||||||||||| ||||||| |||||||| |||||| ||||||||||
seq2  TATCTCTGTCTCTGTCCTCTGTCCCTGTCTCTGGTCTCTGGTCTCTGTCT  949

seq1  CTGTCTCTACTCTCTCTAATATAT-ATATATAATTTATATCTATATTTAT  989
      ||| |||||||||||||||||||| ||||||| || ||||||||||||||
seq2  CTGGCTCTACTCTCTCTAATATATAATATATATTTAATATCTATATTTAT  999

seq1  ATT-GATATATCACCTATATCTATTTATA--TGGAATATGCAGAATACAT  1036
      ||| |||||||||||||||||   |||||   ||||||||||||||||||
seq2  ATTGGATATATCACCTATATCCTATTATAATGGGAATATGCAGAATACAT  1049

seq1  ATAT-GTATATATATACACACACAC  1060
      |||| ||||||||||||||||||||
seq2  ATATGGTATATATATACACACACAC  1074


seq1: chr2_7299686_7300586
seq2: B6Ng01-094B23.g_68_967 (reverse)

seq1  CTAAATGAAGATACAAACTCCAGGGCACCAGGCTCAGGCTTGTTTATTTA  50
      ||||| ||||||||||||||||||||||||||||||||||  || |||||
seq2  CTAAAAGAAGATACAAACTCCAGGGCACCAGGCTCAGGCTGTTTAATTTA  50

seq1  TAGTGCATTAT-AAAATCTTCATAGTCTAAAACAATGAACAGTGCATAAG  99
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCATTATAAAAATCTTCATAGTCTAAAACAATGAACAGTGCATAAG  100

seq1  CAGTATGTAACAGTGGGAACTCTGTAAATAATTCTTGAATCAAAGACACA  149
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGTATGTAACAGTGGGAACTCTGTAAATAATTC-TGAATCAAAGACACA  149

seq1  GGATATGCTTTCTTGGGGAGGCACTCTTCATTGCTCTGGTGTTTAATAAT  199
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  GGATATGC-TTCTGGGGGAGGCACTCTTCATTGCTCTGGTGTTTAATAAT  198

seq1  TGTTAGGTCTAGATCACATAGAGTTAAATCATGGACTATAAAAATCATTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGTCTAGATCACATAGAGTTAAATCATGGACTATAAAAATCATTA  248

seq1  TAAGGAGAAATATGTAAGCCTCTCTCTCCCTTTCTCCTTCTGTGTGTGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGAAATATGTAAGCCTCTCTCTCCCTTTCTCCTTCTGTGTGTGTT  298

seq1  CTTTGTGGCTAAAGTACTAACAAAAGGAAAAGTTCTGAGTTCTTCATCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGCTAAAGTACTAACAAAAGGAAAAGTTCTGAGTTCTTCATCTT  348

seq1  TGTGTTTTTGATATTTGATCACTGTTCCTGTTTTTAATGTTTTGCCTAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTTGATATTTGATCACTGTTCCTGTTTTTAATGTTTTGCCTAGG  398

seq1  GAAAATTTAGTGTCAAGAATCTTAGAACCCTCACTTCTCTGATTTTTCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTAGTGTCAAGAATCTTAGAACCCTCACTTCTCTGATTTTTCAT  448

seq1  CTATATATGTATCTCTGGCCTTTCCAGTAGGGCCAAGATTTTAATACTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATGTATCTCTGGCCTTTCCAGTAGGGCCAAGATTTTAATACTGG  498

seq1  AAAGGCTATAAAAAACACTTCAATGTCAAATATAATTATTTTGTGTCTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTATAAAAAACACTTCAATGTCAAATATAATTATTTTGTGTCTCT  548

seq1  ATGATTCAAGTCTCACTCTGTTCTCCAATATAAACAATGAAATCATCTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCAAGTCTCACTCTGTTCTCCAATATAAACAATGAAATCATCTTA  598

seq1  GGATGATGCATTTTGGCTTATCTATGCTAAGTACAGAGCTAGAAATTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATGCATTTTGGCTTATCTATGCTAAGTACAGAGCTAGAAATTTTC  648

seq1  TGATCATGAATGTCAACGAGAGGGTAGATTTCACTTTTGTGCATGTATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATGAATGTCAACGAGAGGGTAGATTTCACTTTTGTGCATGTATTT  698

seq1  CTCCACATTGGAATCACCAGGCTTCATATTTCTGGATACAAGTAAGCCTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATTGGAATCACCAGGCTTCATATTTCTGGATACAAGTAAGCCTC  748

seq1  CTGTTCATTTTGGTTATGATGAGACTGTAGGACTTATGCTCTTAGGCCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCATTTTGGTTATGATGAGACTGTAGGACTTATGCTCTTAGGCCCA  798

seq1  TTTTAGAAATGAATAGTACAGAGGCAGTTAACTCCAGTGAAAATCACCAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAATGAATAGTACAGAGGCAGTTAACTCCAGTGAAAATCACCAC  848

seq1  AACACTCCTGGGAGTATTCTGGGAAGAGATGCTACATAAACATAAAGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCCTGGGAGTATTCTGGGAAGAGATGCTACATAAACATAAAGAAT  898

seq1  TC  901
      ||
seq2  TC  900


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