BAC Information

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BAC

Clone NameB6Ng01-094C15
Chromosome2 (Build37)
Map Location 46,804,253 - 46,948,685
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094C15.bB6Ng01-094C15.g
ACCDH905455DH905456
length5521,116
definitionDH905455|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C15, 5' end.DH905456|Mus musculus domesticus DNA, BAC clone: B6Ng01-094C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,804,253 - 46,804,801)(46,947,570 - 46,948,685)
sequence
gaattctgaacatttaaaataatccatcataaatgataaactaactcaga
agtctactctagaaaatagtaaattagatgactgaatcctatttaataat
gtacattttaagtgagtttttgtttttcataaatcattttattcatttac
acttcaaaagatacccccttcccagttacccctccacaaaccctccattt
catctcccctttcccccatcccctttgcctctatgaggatgctcctacac
ccactcatctacccctgcctcaccactccagcatcccccttcacagtagc
agtctgaaaaatgcaataaaactttataaatctatgaaattcttacccta
gaggtttaagattattttactttatggtgtatgtgtgtgtgtgtgtgtgt
gtatgtgtgtgtgtgagtgagtgagtttacttaaagtcattgtacatatg
aaagaaaatagacgacctccttcaataagatgcatcaaaaaaaaaaataa
aaaaaaaatctgtactgaaaaataaacgaagatcaaagcaactggatgag
tt
gaattcaaaggagtaatggatatttcaatgttacatgctttaaaaatgaa
tcaggagattttgcttagttgtttaggagggaagccactacgagtagtga
aaaacatcataaagactattaatatcaaaagagaaaaaaatcataatgta
actgagactgatgaagtcaaacagggaacccgagcatcaaaactgaaaga
tgaaggtttcagtggatacaagtttctaagcaattttctctgggccagaa
tgtggatgtcttccccatatgctagataaactgaagtgaccaagtcttaa
aatatgaagaaaaattttaaggtctcttggaaataaatgtatgcagaagc
aaaggcaggtcataaggagaagagaattctgaaacaagaagtgagtcatg
tggagaattacgattaggaaaatagaaggacagcaagcaattttaataca
gagatgtgaacgtgactttttatttcataagttgctctctgtctttctct
ctgtctctctgtctctgtctctctgtctctctctctcttatacataaaca
cacacacacacacacacacacacctatttcccctcatatctatttcccct
catatttttaaatatattcactacttctctgggctctgtttgggcttttg
agtgtcttttcagtatggtttagcacttactcccatctcgtaagatctga
gtgattattttctttattctaagagaaactcactgaaggcatgctaccaa
tttagatttttttaaattatgctttacacattgctaagtacttcacacat
gccttacatgtaagtatttcacaagtataaaattagattactccttatcc
atcttctattttgactataaatttgggccacaaacttaaccaacattgtg
gggatcatgagccacttttttattttaggtatctgtgtagacacaggggg
agagataatacagtttaactaatgtagtttgggaagagtgtgtgaatata
gtgcttctgatactgtctcatggacttcattactgcacaatgatgctatt
ttctatttgtacagggaagaattcttgattgaacaagagccataagaccc
atggcgacttattatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46804253_46804801
seq2: B6Ng01-094C15.b_45_596

seq1  GAATTCTGAACATTTAAAATAATCCATCATAAATGATAAACTAACTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACATTTAAAATAATCCATCATAAATGATAAACTAACTCAGA  50

seq1  AGTCTACTCTAGAAAATAGTAAATTAGATGACTGAATCCTATTTAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACTCTAGAAAATAGTAAATTAGATGACTGAATCCTATTTAATAAT  100

seq1  GTACATTTTAAGTGAGTTTTTGTTTTTCATAAATCATTTTATTCATTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTTAAGTGAGTTTTTGTTTTTCATAAATCATTTTATTCATTTAC  150

seq1  ACTTCAAAAGATACCCCCTTCCCAGTTACCCCTCCACAAACCCTCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAAGATACCCCCTTCCCAGTTACCCCTCCACAAACCCTCCATTT  200

seq1  CATCTCCCCTTTCCCCCATCCCCTTTGCCTCTATGAGGATGCTCCTACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCCCTTTCCCCCATCCCCTTTGCCTCTATGAGGATGCTCCTACAC  250

seq1  CCACTCATCTACCCCTGCCTCACCACTCCAGCATCCCCCTTCACAGTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCATCTACCCCTGCCTCACCACTCCAGCATCCCCCTTCACAGTAGC  300

seq1  AGTCTGAAAAATGCAATAAAACTTTATAAATCTATGAAATTCTTACCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAAAAATGCAATAAAACTTTATAAATCTATGAAATTCTTACCCTA  350

seq1  GAGGTTTAAGATTATTTTACTTTATGGTGTATGTGTGTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTAAGATTATTTTACTTTATGGTGTATGTGTGTGTGTGTGTGTGT  400

seq1  GTATGTGTGTGTGTGAGTGAGTGAGTTTACTTAAAGTAATTGTACATTTG  450
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  GTATGTGTGTGTGTGAGTGAGTGAGTTTACTTAAAGTCATTGTACATATG  450

seq1  ATACATAATCTTCTACCTCCTTCAATCTGATGCATCCTAAGACCA---TA  497
      | | | |||   | ||||||||||||  ||||||||  || |  |    |
seq2  AAAGAAAATAGACGACCTCCTTCAATAAGATGCATCAAAAAAAAAAATAA  500

seq1  AACATACATCTGTACTGTTAAAACATTCTAGATCAACACAACTGGATGAG  547
      || | | ||||||||||  |||  |    |||||||  ||||||||||||
seq2  AAAAAAAATCTGTACTGAAAAATAAACGAAGATCAAAGCAACTGGATGAG  550

seq1  TT  549
      ||
seq2  TT  552

seq1: chr2_46947570_46948685
seq2: B6Ng01-094C15.g_71_1186 (reverse)

seq1  GATAATAAGGTCTGCATGGGGTCTTTATGGCTCTTG-TCAATCAAGAATC  49
      |||||||| |||  ||| ||||| |||||||||||| |||||||||||| 
seq2  GATAATAA-GTCGCCAT-GGGTC-TTATGGCTCTTGTTCAATCAAGAATT  47

seq1  TGTCCCTGTACAAATAGAAAATAGCATCA-TGTGCAGTAAGTGAGGTCCA  98
        ||||||||||||||||||||||||||| |||||||||| ||| |||||
seq2  CTTCCCTGTACAAATAGAAAATAGCATCATTGTGCAGTAA-TGAAGTCCA  96

seq1  TGAGACAGTATCAGAAGCACTATATTCACACACTCTT-CCAAACTACATT  147
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGAGACAGTATCAGAAGCACTATATTCACACACTCTTCCCAAACTACATT  146

seq1  AGTTAAACTGTATTATCTCT-CCCCTGTGTCTACACAGATACCTAAA--T  194
      |||||||||||||||||||| ||||||||||||||||||||||||||   
seq2  AGTTAAACTGTATTATCTCTCCCCCTGTGTCTACACAGATACCTAAAATA  196

seq1  AAAAAGTGGCTCATGATCCCACTAATGTTGGTTAAGTTTGTGGCCAGAAT  244
      ||||||||||||||||||||   ||||||||||||||||||||||  |||
seq2  AAAAAGTGGCTCATGATCCCCACAATGTTGGTTAAGTTTGTGGCCCAAAT  246

seq1  TTATAGTCAAAATAGAAGATGGATAAGGAGTAAATCTAATTTTATACTTG  294
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTATAGTCAAAATAGAAGATGGATAAGGAGT-AATCTAATTTTATACTTG  295

seq1  TGAAATACTTACATGTAAGGCATGTGTGAAGTACTTAGCAATGTGTAAAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATACTTACATGTAAGGCATGTGTGAAGTACTTAGCAATGTGTAAAG  345

seq1  CATAATTTAAAAAAATCTAAATTGGTAGCATGCCTTCAGTGAGTTTCTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTAAAAAAATCTAAATTGGTAGCATGCCTTCAGTGAGTTTCTCT  395

seq1  TAGAATAAAGAAAATAATCACTCAGAATCTTACGAGATGGGAGTAAGTGC  444
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGAATAAAGAAAATAATCACTCAG-ATCTTACGAGATGGGAGTAAGTGC  444

seq1  TAAACCATACTGAAAAGACACTCAAAAGCCCAAACAGAGCCCAGAGAAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATACTGAAAAGACACTCAAAAGCCCAAACAGAGCCCAGAGAAGT  494

seq1  AGTGAATATATTTAAAAATATGAGGGGAAATAGATATGAGGGGAAATAGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATATATTTAAAAATATGAGGGGAAATAGATATGAGGGGAAATAGG  544

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTTTATGTATAAGAGAGAGAGAGACAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTTTATGTATAAGAGAGAGAGAGACAG  594

seq1  AGAGACAGAGACAGAGAGACAGAGAGAAAGACAGAGAGCAACTTATGAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGACAGAGAGACAGAGAGAAAGACAGAGAGCAACTTATGAAA  644

seq1  TAAAAAGTCACGTTCACATCTCTGTATTAAAATTGCTTGCTGTCCTTCTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTCACGTTCACATCTCTGTATTAAAATTGCTTGCTGTCCTTCTA  694

seq1  TTTTCCTAATCGTAATTCTCCACATGACTCACTTCTTGTTTCAGAATTCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTAATCGTAATTCTCCACATGACTCACTTCTTGTTTCAGAATTCT  744

seq1  CTTCTCCTTATGACCTGCCTTTGCTTCTGCATACATTTATTTCCAAGAGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCTTATGACCTGCCTTTGCTTCTGCATACATTTATTTCCAAGAGA  794

seq1  CCTTAAAATTTTTCTTCATATTTTAAGACTTGGTCACTTCAGTTTATCTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAATTTTTCTTCATATTTTAAGACTTGGTCACTTCAGTTTATCTA  844

seq1  GCATATGGGGAAGACATCCACATTCTGGCCCAGAGAAAATTGCTTAGAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGGGGAAGACATCCACATTCTGGCCCAGAGAAAATTGCTTAGAAA  894

seq1  CTTGTATCCACTGAAACCTTCATCTTTCAGTTTTGATGCTCGGGTTCCCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATCCACTGAAACCTTCATCTTTCAGTTTTGATGCTCGGGTTCCCT  944

seq1  GTTTGACTTCATCAGTCTCAGTTACATTATGATTTTTTTCTCTTTTGATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACTTCATCAGTCTCAGTTACATTATGATTTTTTTCTCTTTTGATA  994

seq1  TTAATAGTCTTTATGATGTTTTTCACTACTCGTAGTGGCTTCCCTCCTAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGTCTTTATGATGTTTTTCACTACTCGTAGTGGCTTCCCTCCTAA  1044

seq1  ACAACTAAGCAAAATCTCCTGATTCATTTTTAAAGCATGTAACATTGAAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTAAGCAAAATCTCCTGATTCATTTTTAAAGCATGTAACATTGAAA  1094

seq1  TATCCATTACTCCTTTGAATTC  1116
      ||||||||||||||||||||||
seq2  TATCCATTACTCCTTTGAATTC  1116