BAC Information

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BAC

Clone NameB6Ng01-094F22
Chromosome2 (Build37)
Map Location 57,730,008 - 57,894,242
singlet/doubletdoublet
Overlap geneGalnt5
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788
Downstream geneA330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062, Acvr1, LOC674940, Upp2, BC062650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094F22.bB6Ng01-094F22.g
ACCDH905613DH905614
length1,1421,070
definitionDH905613|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F22, 5' end.DH905614|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,730,008 - 57,731,157)(57,893,149 - 57,894,242)
sequence
gaattctaatctgaatttttctctcatgccatccccactgctttatggga
aaaaaaaaaacaactacagtgagtgctatttcttaacctcattcatttct
tcactcactcacccagccacccactttctagcagtagtgttaccttacat
aagaagagccttttacacaagaagaatctactactctgcctagtagattc
tatttctccctgtaacttcaattcaagatcacaagttctggaaggtcaac
tatatttacctagagtaacttggatatgtctattctgggcttccatctct
cagccgacatttttttttttctatctgaaatcaaagtagggactagatct
ctatcaagcatagctcagccttgagtaaatagtttgtaataagtatttcc
ttgattaactgatgactacttgcattaaatggcaatgcacctaaaataca
aaatacgctcaacattaaacaggatttcctttaatgtgaaagcttcagag
agatgtgggagatatcttttaacatattattcaaaatcagttcattacta
acacaatagaattttccctcttgggacactgatgctttgggattagtggg
agatggatgattcggagaagggctaaaaggcatgagaaattagaatgttc
cactactctgcttggaacctgtcttcataaacaatatctcaaacactgga
ctcatggttgtctttcttttcaccattactgttgagcaggtaagaacaca
cacacacacacacacacacacacacacacacacaaacacacacaaacaca
tatatattgtagccaaggtactttcaatagagctgtattttgcatgggct
catacgtacttaaaactttcaacctctaacaactttgccttggatacaga
tgatctagtccaaagagccagtctccatgtaccactgagacaggctcctt
gtcttctatagccctggggtcattcaaaatcacattcttaataatagtct
ggaatcacatgacatgccaagaaggcttttactgttttttaccgactgac
ctgaattagccaattaccatccaggtccttgggacagcagaaacaacctc
cggaaagtttgcgaggtgttccgactgtaaggggaccaggtg
gaattctctcagaccacaaagtgtgccttcaaaggttagtcatatgtaaa
agatgctgtagtagaatttttatactccttctggtcttcaaaaaacaaat
ttgggggacagtgcttattaaaaatattggggtatcaagtttctatagga
ttaggcatatcctctcccactgagtccagataaggcagtcctctggtaca
tatgtgcggggacctcagactagcctgtgtatgcttttggtagtggctta
atccaaggagggggggtggcccagggggtaccttctcagaggcaaaggga
aggatgggggaagaactctgtgagggcgaccaggaggcaagaacatttgg
gatgcaaatacataaaataattcattaataataatttttaaaatgttggc
agtatatttgagaatcagaacactggccagaattgtcattgggttttatc
tattgttgatgagatgatcatatccttccttagttgtaaggaagagatag
atattctccttatcacatggaggaaagaaagatgcatacaagctaataag
atgagcacacacaagcacagagggtgtaagcacccagtgaaaattagttt
atctccttctacttccctcatttcttgtagttttgtgagttttatagaag
ttgtataagccttctttcaagactaggtccacagagactcctaagtcatg
actaattctttgcatctttgggtaagcaagacaatgtatgatagaaaatt
ggtacaattttacccccaaataaatatataatgttacaaataaagccctt
gttctatagacggtcctcagaggtagctttatatacagatatgtcaaggt
acagttagatagtgcatagagcagaggctacagaaagttctcttgtggaa
aacaaaaacacaacaacacacaaacaatttactttcttcatatccaagtg
atctagccaagcatggctcatctttgctaaagattttcctgagtaactgt
cttgataatacatgctctgcagacatgacgaagccaagtcaaggtgtctc
agttacatgaaagtgactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57730008_57731157
seq2: B6Ng01-094F22.b_49_1190

seq1  GAATTCTAATCTGAATTTTTCTCTCATGCCATCCCCACTGCTTTATGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATCTGAATTTTTCTCTCATGCCATCCCCACTGCTTTATGGGA  50

seq1  AAAAAAAAAACAACTACAGTGAGTGCTATTTCTTAACCTCATTCATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACAACTACAGTGAGTGCTATTTCTTAACCTCATTCATTTCT  100

seq1  TCACTCACTCACCCAGCCACCCACTTTCTAGCAGTAGTGTTACCTTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACTCACCCAGCCACCCACTTTCTAGCAGTAGTGTTACCTTACAT  150

seq1  AAGAAGAGCCTTTTACACAAGAAGAATCTACTACTCTGCCTAGTAGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGCCTTTTACACAAGAAGAATCTACTACTCTGCCTAGTAGATTC  200

seq1  TATTTCTCCCTGTAACTTCAATTCAAGATCACAAGTTCTGGAAGGTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCCCTGTAACTTCAATTCAAGATCACAAGTTCTGGAAGGTCAAC  250

seq1  TATATTTACCTAGAGTAACTTGGATATGTCTATTCTGGGCTTCCATCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTACCTAGAGTAACTTGGATATGTCTATTCTGGGCTTCCATCTCT  300

seq1  CAGCCGACATTTTTTTTTTTCTATCTGAAATCAAAGTAGGGACTAGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGACATTTTTTTTTTTCTATCTGAAATCAAAGTAGGGACTAGATCT  350

seq1  CTATCAAGCATAGCTCAGCCTTGAGTAAATAGTTTGTAATAAGTATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAAGCATAGCTCAGCCTTGAGTAAATAGTTTGTAATAAGTATTTCC  400

seq1  TTGATTAACTGATGACTACTTGCATTAAATGGCAATGCACCTAAAATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTAACTGATGACTACTTGCATTAAATGGCAATGCACCTAAAATACA  450

seq1  AAATACGCTCAACATTAAACAGGATTTCCTTTAATGTGAAAGCTTCAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACGCTCAACATTAAACAGGATTTCCTTTAATGTGAAAGCTTCAGAG  500

seq1  AGATGTGGGAGATATCTTTTAACATATTATTCAAAATCAGTTCATTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGGGAGATATCTTTTAACATATTATTCAAAATCAGTTCATTACTA  550

seq1  ACACAATAGAATTTTCCCTCTTGGGACACTGATGCTTTGGGATTAGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATAGAATTTTCCCTCTTGGGACACTGATGCTTTGGGATTAGTGGG  600

seq1  AGATGGATGATTCGGAGAAGGGCTAAAAGGCATGAGAAATTAGAATGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGATGATTCGGAGAAGGGCTAAAAGGCATGAGAAATTAGAATGTTC  650

seq1  CACTACTCTGCTTGGAACCTGTCTTCATAAACAATATCTCAAACACTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTCTGCTTGGAACCTGTCTTCATAAACAATATCTCAAACACTGGA  700

seq1  CTCATGGTTGTCTTTCTTTTCACCATTACTGTTGAGCAGGTAAGAACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGTTGTCTTTCTTTTCACCATTACTGTTGAGCAGGTAAGAACACA  750

seq1  CACACACACACACACACACACACACACACACACAAACACACACAAACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACAAACACACACAAACACA  800

seq1  TATATATTGTAGCCAAGGTACTTTCAATAGAGCTGTATTTTGCATGGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTGTAGCCAAGGTACTTTCAATAGAGCTGTATTTTGCATGGGCT  850

seq1  CATACGTACTTAAAACTTTCAAACCTCTAACAACTTTGCCTTGGATACAG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATACGTACTTAAAACTTTC-AACCTCTAACAACTTTGCCTTGGATACAG  899

seq1  ATGATCTAGTCCAAAGAGCCAGTCTCCATGTACCACTGAGACAGGCTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTAGTCCAAAGAGCCAGTCTCCATGTACCACTGAGACAGGCTCCT  949

seq1  TGTCTTCTATAGCCCTGGGCTCATTCAAAATCACATTCCTTAATAATAGT  1000
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  TGTCTTCTATAGCCCTGGGGTCATTCAAAATCACATT-CTTAATAATAGT  998

seq1  CTGGAATCACATGACCATGCCAAGGAAGGCTTTTACTG-TTTTTACCGAA  1049
      |||||||||||||| |||||||| |||||||||||||| ||||||||| |
seq2  CTGGAATCACATGA-CATGCCAA-GAAGGCTTTTACTGTTTTTTACCG-A  1045

seq1  CTGACCTGAATGTAG-CAATTACCAT-CAGGTCCTTGGAGACAGCAGAAC  1097
      ||||||||||| ||| |||||||||| ||||||||||| |||||||||| 
seq2  CTGACCTGAAT-TAGCCAATTACCATCCAGGTCCTTGG-GACAGCAGAAA  1093

seq1  GACCTTCAGGAACAGTTTGC-AGGTGTTCAGCACTTGGTAATGTGGACCA  1146
       | | || |||| ||||||| |||||||| | |||  |||| | ||||||
seq2  CAACCTCCGGAA-AGTTTGCGAGGTGTTCCG-ACT--GTAA-GGGGACCA  1138

seq1  GGTG  1150
      ||||
seq2  GGTG  1142

seq1: chr2_57893149_57894242
seq2: B6Ng01-094F22.g_68_1137 (reverse)

seq1  TCAGTCACTTTCATGTGACTGAGACACCTTGACTGTGCCTCTGTTCATTG  50
      |||||||||||||||| |||||||||||||||||  || ||   ||||  
seq2  TCAGTCACTTTCATGTAACTGAGACACCTTGACTTGGCTTC--GTCAT--  46

seq1  GTCTGCAGAGCATGTATTTTATCCAAGAACAGTTTACTCAAGGAAAAATC  100
      |||||||||||||||||| |   |||| |||| |||||| |||||||   
seq2  GTCTGCAGAGCATGTATTAT---CAAG-ACAG-TTACTC-AGGAAAA---  87

seq1  TTTTTAGCAAAAGATGAGCCATGCTTTGGCTAGATCCACCCTTGGATATG  150
      | |||||| ||||||||||||||| ||||||||||   | ||||||||||
seq2  TCTTTAGC-AAAGATGAGCCATGC-TTGGCTAGAT---CACTTGGATATG  132

seq1  AAGAAAGTAAATTGTTTTGTTGTTGTTGTTGTTGTTTTTGTTTTCCCACA  200
      |||||||||||||||||   ||||||||    |||||||||||| |||||
seq2  AAGAAAGTAAATTGTTTGTGTGTTGTTG----TGTTTTTGTTTT-CCACA  177

seq1  AGAGAACTTTCTGTAGCCTCTGCTCTATGCACTATCTAACTGTACCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTTTCTGTAGCCTCTGCTCTATGCACTATCTAACTGTACCTTGA  227

seq1  CATATCTGTTATATAAAGCTACCTCTGAGGACCGTCTATAGAACAAGGGC  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTG-TATATAAAGCTACCTCTGAGGACCGTCTATAGAACAAGGGC  276

seq1  TTTATTTGTAACATTATATATTTATTTGGGGGTAAAATTGTACCAATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTAACATTATATATTTATTTGGGGGTAAAATTGTACCAATTTT  326

seq1  CTATCATACATTGTCTTGCTTACCCAAAGATGCAAAGAATTAGTCATGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATACATTGTCTTGCTTACCCAAAGATGCAAAGAATTAGTCATGAC  376

seq1  TTAGGAGTCTCTGTGGACCTAGTCTTGAAAGAAGGCTTATACAACTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGTCTCTGTGGACCTAGTCTTGAAAGAAGGCTTATACAACTTCTA  426

seq1  TAAAACTCACAAAACTACAAGAAATGAGGGAAGTAGAAGGAGATAAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCACAAAACTACAAGAAATGAGGGAAGTAGAAGGAGATAAACTA  476

seq1  ATTTTCACTGGGTGCTTACACCCTCTGTGCTTGTGTGTGCTCATCTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACTGGGTGCTTACACCCTCTGTGCTTGTGTGTGCTCATCTTATT  526

seq1  AGCTTGTATGCATCTTTCTTTCCTCCATGTGATAAGGAGAATATCTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTATGCATCTTTCTTTCCTCCATGTGATAAGGAGAATATCTATCT  576

seq1  CTTCCTTACAACTAAGGAAGGATATGATCATCTCATCAACAATAGATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTACAACTAAGGAAGGATATGATCATCTCATCAACAATAGATAAA  626

seq1  ACCCAATGACAATTCTGGCCAGTGTTCTGATTCTCAAATATACTGCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATGACAATTCTGGCCAGTGTTCTGATTCTCAAATATACTGCCAAC  676

seq1  ATTTTAAAAATTATTATTAATGAATTATTTTATGTATTTGCATCCCAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAATTATTATTAATGAATTATTTTATGTATTTGCATCCCAAAT  726

seq1  GTTCTTGCCTCCTGGTCGCCCTCACAGAGTTCTTCCCCCATCCTTCCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGCCTCCTGGTCGCCCTCACAGAGTTCTTCCCCCATCCTTCCCTT  776

seq1  TGCCTCTGAGAAGGTACCCCCTGGGCCACCCCCCCTCCTTGGATTAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGAGAAGGTACCCCCTGGGCCACCCCCCCTCCTTGGATTAAGCC  826

seq1  ACTACCAAAAGCATACACAGGCTAGTCTGAGGTCCCCGCACATATGTACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCAAAAGCATACACAGGCTAGTCTGAGGTCCCCGCACATATGTACC  876

seq1  AGAGGACTGCCTTATCTGGACTCAGTGGGAGAGGATATGCCTAATCCTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACTGCCTTATCTGGACTCAGTGGGAGAGGATATGCCTAATCCTAT  926

seq1  AGAAACTTGATACCCCAATATTTTTAATAAGCACTGTCCCCCAAATTTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTGATACCCCAATATTTTTAATAAGCACTGTCCCCCAAATTTGT  976

seq1  TTTTTGAAGACCAGAAGGAGTATAAAAATTCTACTACAGCATCTTTTACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAGACCAGAAGGAGTATAAAAATTCTACTACAGCATCTTTTACA  1026

seq1  TATGACTAACCTTTGAAGGCACACTTTGTGGTCTGAGAGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTAACCTTTGAAGGCACACTTTGTGGTCTGAGAGAATTC  1070