BAC Information

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BAC

Clone NameB6Ng01-094G04
Chromosome2 (Build37)
Map Location 11,605,168 - 11,606,252
singlet/doubletsinglet
Overlap geneIl2ra
Upstream geneLOC100040690, LOC100040703, LOC667192, Prkcq, LOC100040733, LOC100040898, LOC667211, Pfkfb3, Rbm17
Downstream geneIl15ra, Fbxo18, Ankrd16, EG635919, LOC667247, Itga8, 2310047O13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G04.bB6Ng01-094G04.g
ACCDH905625DH905626
length1,0851,186
definitionDH905625|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G04, 5' end.DH905626|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtatagccagaacgacatagtgagaccttgtttcaaagaaat
aaaagaatttttaaaaagagaaagataaatgtttgttcccagcttactct
cctttttatggaacctatggaatggggccccacatttagagcagtctccc
tacccatttagcctaatcttgataacctctcaaggacgtgtccagaacgt
tatctctaatgtgactcgaaaacctgtcaatcaacataaaccaagagcat
catcagagttaaatcacccaaaaccagtttctcccacatacattttcaag
aacaatgcctcccaaactttggtgagagacaaagcaaggatccagggaga
gaaaatatagtgtccatacgcacctcagttattcctggtaggaggcaaaa
gcaggccttcctgaaccacggaatcaatggaagcttctggaagattcaca
tgtcagcatttgggaagtgtgagcacttccaggcgatatcggtgtgttta
ggatttcttatcttgtttcaatagttcctttatgaaggatgatgctgcta
atgaggactatcctctgggccttcctcaggttgagctgttctgtcaagta
ccagcctctttctatggctgttccttctatgccccctctgctctttgaag
gctccttgatccttctaagaaatacccagggagaagaggaaagaaagaag
aaactgcaggccccagctgttcaggaggtccttgatcacctacagaattt
tctcacctgatctacagatccaacccccgatccatgcattcccaaagcat
ggtcctgacctgaactccatctccctctcttgacagtggccagctgcctc
ttcctgctcatcagcatcctccttcctgagcgggctcacctggcaacaca
gatggtaagtccaacactggaaaggacccagcacccagtgtctggtccct
ggcctggcatcgtgaacattgcctagagcttgacctcagctgacacgctg
ggaagatggctccgacgaaagcatgagatgggtgttgcaattcctaaagc
tttgtttaaaaaaaatcgatggtgatgatggcatt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactccccttgttggtggg
attgcaagcttgtacaaccactctggaaatcagtctggcggttcctcaga
aaattggacatagtactaccagaggatcccgcaatacctctcctgggcat
atatccagaagatgtcccaaccggtaagaagaacacatgctccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggagtggatacagaaaatgtggtacatttacacaatgga
atacttctcagcaattaaaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaag
gaactcgcacaatatgtattcactgataagtggaaattagcccagaaact
taggatacccaatatataagatacaacttgccaaacgcatgaaattcaag
aagaacgaagaccaaagtgtggacactctaccctttcttagaaatgggaa
caaaacacccatagaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatgcagggatccatcccataatc
agcttccaaatgctcacaccattgcatacactagcaatattttgctgaaa
ggacccagatatagctctctcttggggagactatgccggggcctagcaaa
cacatagtgggatgatcacagtcagttattggatgggtcacacggcccct
tatggaggagctagaggaatacccaaggagctaaagggactgcaccctta
taggtggaacacatatgaactaccagtacccgggagctcttgtcttagct
gcatatgtatcaaagatgtctagtcggttatcacttgcaagaagaggccc
atggactgcacctttatatgccagttacaggggaacccaaggtcataaag
gggcagtgtggtggggttaggggggatctgtaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_11605168_11606252
seq2: B6Ng01-094G04.b_42_1126

seq1  GAATTCCAGTATAGCCAGAACGACATAGTGAGACCTTGTTTCAAAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTATAGCCAGAACGACATAGTGAGACCTTGTTTCAAAGAAAT  50

seq1  AAAAGAATTTTTAAAAAGAGAAAGATAAATGTTTGTTCCCAGCTTACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATTTTTAAAAAGAGAAAGATAAATGTTTGTTCCCAGCTTACTCT  100

seq1  CCTTTTTATGGAACCTATGGAATGGGGCCCCACATTTAGAGCAGTCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTATGGAACCTATGGAATGGGGCCCCACATTTAGAGCAGTCTCCC  150

seq1  TACCCATTTAGCCTAATCTTGATAACCTCTCAAGGACGTGTCCAGAACGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATTTAGCCTAATCTTGATAACCTCTCAAGGACGTGTCCAGAACGT  200

seq1  TATCTCTAATGTGACTCGAAAACCTGTCAATCAACATAAACCAAGAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTAATGTGACTCGAAAACCTGTCAATCAACATAAACCAAGAGCAT  250

seq1  CATCAGAGTTAAATCACCCAAAACCAGTTTCTCCCACATACATTTTCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGTTAAATCACCCAAAACCAGTTTCTCCCACATACATTTTCAAG  300

seq1  AACAATGCCTCCCAAACTTTGGTGAGAGACAAAGCAAGGATCCAGGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGCCTCCCAAACTTTGGTGAGAGACAAAGCAAGGATCCAGGGAGA  350

seq1  GAAAATATAGTGTCCATACGCACCTCAGTTATTCCTGGTAGGAGGCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATAGTGTCCATACGCACCTCAGTTATTCCTGGTAGGAGGCAAAA  400

seq1  GCAGGCCTTCCTGAACCACGGAATCAATGGAAGCTTCTGGAAGATTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCTTCCTGAACCACGGAATCAATGGAAGCTTCTGGAAGATTCACA  450

seq1  TGTCAGCATTTGGGAAGTGTGAGCACTTCCAGGCGATATCGGTGTGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCATTTGGGAAGTGTGAGCACTTCCAGGCGATATCGGTGTGTTTA  500

seq1  GGATTTCTTATCTTGTTTCAATAGTTCCTTTATGAAGGATGATGCTGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTTATCTTGTTTCAATAGTTCCTTTATGAAGGATGATGCTGCTA  550

seq1  ATGAGGACTATCCTCTGGGCCTTCCTCAGGTTGAGCTGTTCTGTCAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGACTATCCTCTGGGCCTTCCTCAGGTTGAGCTGTTCTGTCAAGTA  600

seq1  CCAGCCTCTTTCTATGGCTGTTCCTTCTATGCCCCCTCTGCTCTTTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCTTTCTATGGCTGTTCCTTCTATGCCCCCTCTGCTCTTTGAAG  650

seq1  GCTCCTTGATCCTTCTAAGAAATACCCAGGGAGAAGAGGAAAGAAAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGATCCTTCTAAGAAATACCCAGGGAGAAGAGGAAAGAAAGAAG  700

seq1  AAACTGCAGGCCCCAGCTGTTCAGGAGGTCCTTGATCACCTACAGAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAGGCCCCAGCTGTTCAGGAGGTCCTTGATCACCTACAGAATTT  750

seq1  TCTCACCTGATCTACAGATCCAACCCCCGATCCATGCATTCCCAAAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTGATCTACAGATCCAACCCCCGATCCATGCATTCCCAAAGCAT  800

seq1  GGTCCTGACCTGAACTCCATCTCCCTCTCTTGACAGTGGCCAGCTGCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGACCTGAACTCCATCTCCCTCTCTTGACAGTGGCCAGCTGCCTC  850

seq1  TTCCTGCTCATCAGCATCCTCC-TCCTGAGCGGGCTCACCTGGCAACACA  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCCTGCTCATCAGCATCCTCCTTCCTGAGCGGGCTCACCTGGCAACACA  900

seq1  GATGGTAAGTCCAACACTGG-AAGGACCCAGCACCCCAGTGTCTGGTCCC  948
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  GATGGTAAGTCCAACACTGGAAAGGACCCAGCA-CCCAGTGTCTGGTCCC  949

seq1  TGGCCTGGCATCGTGAACATTGCCTAGAGCTTGACCTCAGCTGACACGCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGGCATCGTGAACATTGCCTAGAGCTTGACCTCAGCTGACACGCT  999

seq1  GGGAAGATGGCTCCGACGAAAGCATGAGATGGGTG-TGCAATTCCTAAAA  1047
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  GGGAAGATGGCTCCGACGAAAGCATGAGATGGGTGTTGCAATTCCT-AAA  1048

seq1  GCTTTGTTTAAAAAAAAATCGAATGTGATGATGGCATT  1085
      ||||||||| ||||||||||||  ||||||||||||||
seq2  GCTTTGTTT-AAAAAAAATCGATGGTGATGATGGCATT  1085