BAC Information

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BAC

Clone NameB6Ng01-095L13
Chromosome2 (Build37)
Map Location 53,968,411 - 54,082,605
singlet/doubletdoublet
Overlap genenone
Upstream geneFmnl2, Prpf40a, Arl6ip6, LOC666872, LOC666876, LOC207933, Rprm
Downstream geneLOC666913, LOC626563, LOC100041792, LOC100042878, Galnt13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095L13.bB6Ng01-095L13.g
ACCDH906584DH906585
length1,0981,103
definitionDH906584|Mus musculus domesticus DNA, BAC clone: B6Ng01-095L13, 5' end.DH906585|Mus musculus domesticus DNA, BAC clone: B6Ng01-095L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,968,411 - 53,969,524)(54,081,466 - 54,082,605)
sequence
gaattcctattgcctttttgcttttttgtgtcttgttagactacttttga
ttcagtgttctggaaatggttatttatgtttctgtttttttgtgacggga
cctagactctgaagtttgattgttggaaatgttttaggtatggaatcact
gtctcccctttttgagtggatgtttgaagttattttctttggccctatct
ttgtccgatggtagccctgctctatgtagttcaggtttcagttttggtaa
aaaaaacaaatcagtttttatgagtatcagctcaaaccaagtgaggtttc
taagctcagaaacaaatcctttgtagaggtagaagattctcatagctaaa
cttcaggagtctgggcaaactacttatgaaattctttaagaaaatgtaag
ggagctaacaaagttgggaattctagattctaatatgaataaaataatat
aagttgggaggcagaaagcagaaatgagtccctttgtacttaagcaggtt
tccaggatgagtggagtgttggtgcagaagacagagcgcccttacctaga
ggaatattacctagggatattccttggagagcttttatagagtaatgtat
ctaggctaagtctctaaacaaccagtttagtagactgtggatgttttaaa
aaaactatcagtaactctcatatgttctttgtgttaaaaagaacatattc
ttattttctaatacaaaagccagattttctaagagaaatgattaaattta
gggctgagacaggaaaatacaatatgcatttcaaatgctgtgtaatactg
gaatgcaagtagattctcaacaagacatgattttcagaaatgtatatgca
accaacgtgaaggaaccaaccaacaaccagtgctggaacaatttaaggag
taaaatagtcattgtggcagtattgaaattctgcccatgaatgaaataag
gcttcatcaatctaacaatcattttaaaatggaatacaagcaaacagaag
aacgatagttctcctcatagtagaatcttagtataagtgaagaaggacaa
gaatgttgcaacacttattgcagtaggatcaccaattgtttgtaaaat
gaattcactatacttactaccagtagaagctacctatattgaactcagct
atccattaccatatccacatagacatatttactgcctttccaaggtattg
ttttgctcaaatgcataaagttatgttttagtgttcttttttctaggcaa
actaggcaaactgcattatctttcctgtacagactgtacattccaaccat
aacttagcccttggattttccattacattacttaagttcatagaaatttg
gaataataattggacacattttctcaagaggtttgaatgattcttggtgg
agaccaagaactgtacctttcagaagacaatagaagcctggatttcaata
ttgtttcgaatattgacttttcatgccttgcactaaaaacgtactacaaa
agctttaatttctcaaaaccaaaatcagaattatttatttttatctaaca
gacttctcttgaagttaggaaacacttcagtgaggagaaaataattcgta
gacacttaacataattttcaataataatagcacaaatgaaaatctgattt
ttaaaattaattaactcataaattttggagaactgaagctaggcctcata
cacacacgctagcactctgcaacagaaccttattcccacctcagattcta
gaagggagctatgaagaagtgcatttaaacattagactgagaccctcaat
tctcgttttagacagttataagctatgaaataaaatatgaagctctgaac
tatttattggggcatatttaattatttaaacttgtactgcactgttcttc
tctacattagagacagtaattggaaacagaagggaatttaataaatacta
gttgttaactgctagtctctatttagctcttttccatttggaagtggttg
cattttgattgtgatatacatagtgggtgtgctttcaaaagattcagaga
tggggtggtgatgttacatatcagtgttagtgctgatttcttccagcacg
ctaaatgcatcacaatgaaatacagaaagcagaagtctggattctctttc
cagaatccccaccagacacattgcttcagtaacctattatttctgtgaat
cca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_53968411_53969524
seq2: B6Ng01-095L13.b_46_1143

seq1  GAATTCCTATTGCCTTTTTGCTTTTTTGTGTCTTGTTAGACTACTTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTGCCTTTTTGCTTTTTTGTGTCTTGTTAGACTACTTTTGA  50

seq1  TTCAGTGTTCTGGAAATGGTTATTTATGTTTCTGTTTTTTTGTGACGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTTCTGGAAATGGTTATTTATGTTTCTGTTTTTTTGTGACGGGA  100

seq1  CCTAGACTCTGAAGTTTGATTGTTGGAAATGTTTTAGGTATGGAATCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACTCTGAAGTTTGATTGTTGGAAATGTTTTAGGTATGGAATCACT  150

seq1  GTCTCCCCTTTTTGAGTGGATGTTTGAAGTTATTTTCTTTGGCCCTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCCTTTTTGAGTGGATGTTTGAAGTTATTTTCTTTGGCCCTATCT  200

seq1  TTGTCCGATGGTAGCCCTGCTCTATGTAGTTCAGGTTTCAGTTTTGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCGATGGTAGCCCTGCTCTATGTAGTTCAGGTTTCAGTTTTGGTAA  250

seq1  AAAAAACAAATCAGTTTTTATGAGTATCAGCTCAAACCAAGTGAGGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAATCAGTTTTTATGAGTATCAGCTCAAACCAAGTGAGGTTTC  300

seq1  TAAGCTCAGAAACAAATCCTTTGTAGAGGTAGAAGATTCTCATAGCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCAGAAACAAATCCTTTGTAGAGGTAGAAGATTCTCATAGCTAAA  350

seq1  CTTCAGGAGTCTGGGCAAACTACTTATGAAATTCTTTAAGAAAATGTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGAGTCTGGGCAAACTACTTATGAAATTCTTTAAGAAAATGTAAG  400

seq1  GGAGCTAACAAAGTTGGGAATTCTAGATTCTAATATGAATAAAATAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAACAAAGTTGGGAATTCTAGATTCTAATATGAATAAAATAATAT  450

seq1  AAGTTGGGAGGCAGAAAGCAGAAATGAGTCCCTTTGTACTTAAGCAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGGAGGCAGAAAGCAGAAATGAGTCCCTTTGTACTTAAGCAGGTT  500

seq1  TCCAGGATGAGTGGAGTGTTGGTGCAGAAGACAGAGCGCCCTTACCTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGATGAGTGGAGTGTTGGTGCAGAAGACAGAGCGCCCTTACCTAGA  550

seq1  GGAATATTACCTAGGGATATTCCTTGGAGAGCTTTTATAGAGTAATGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTACCTAGGGATATTCCTTGGAGAGCTTTTATAGAGTAATGTAT  600

seq1  CTAGGCTAAGTCTCTAAACAACCAGTTTAGTAGACTGTGGATGTTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTAAGTCTCTAAACAACCAGTTTAGTAGACTGTGGATGTTTTAAA  650

seq1  AAAACTATCAGTAACTCTCATATGTTCTTTGTGTTAAAAAGAACATATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATCAGTAACTCTCATATGTTCTTTGTGTTAAAAAGAACATATTC  700

seq1  TTATTTTCTAATACAAAAGCCAGATTTTCTAAGAGAAATGATTAAATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTAATACAAAAGCCAGATTTTCTAAGAGAAATGATTAAATTTA  750

seq1  GGGCTGAGACAGGAAAATACAATATGCATTTCAAATGCTGTGTAATACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAGACAGGAAAATACAATATGCATTTCAAATGCTGTGTAATACTG  800

seq1  GAATGCAAGTAGATTCTCAACAAGACATGATTTTCAGAAATGTATATGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAAGTAGATTCTCAACAAGACATGATTTTCAGAAATGTATATGCA  850

seq1  ACCAACGTGAAGGAACCAACCAACAACCAGTGCTGGAACAATTTAAGGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACGTGAAGGAACCAACCAACAACCAGTGCTGGAACAATTTAAGGAG  900

seq1  TAAAATAGTCATTGTGGCAGTATTGAATTTCTGCCCATGAATGAAATAAG  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAAAATAGTCATTGTGGCAGTATTGAAATTCTGCCCATGAATGAAATAAG  950

seq1  GCTTCATCAATCTTAACAATCCATTTTTAAAATGGAATTAACAAGCAAAC  1000
      |||||||||||| ||||||||   ||||||||||||||  ||||||||||
seq2  GCTTCATCAATC-TAACAATC--ATTTTAAAATGGAAT--ACAAGCAAAC  995

seq1  AGAAGAACAGATAGTTCTTCCTCATAGTAGAATCTTAGTTAATAAGTGAA  1050
      |||||||| |||||||| |||||||||||||||||||||  |||||||||
seq2  AGAAGAAC-GATAGTTC-TCCTCATAGTAGAATCTTAGT--ATAAGTGAA  1041

seq1  GAAAGGACAAG-ATGTTTGGCAAACACTTTAAATGCAGTTAGGATCCACC  1099
      | ||||||||| |||||  || |||||||  | ||||| |||||| ||||
seq2  G-AAGGACAAGAATGTT--GC-AACACTT--ATTGCAG-TAGGAT-CACC  1083

seq1  AA-TGTTTGTTAAAAT  1114
      || |||||| ||||||
seq2  AATTGTTTG-TAAAAT  1098

seq1: chr2_54081466_54082605
seq2: B6Ng01-095L13.g_67_1169 (reverse)

seq1  TGGATTCAACAGAAAATAAATAGGTAAACCTGAAGCATATGTGTGCTGGT  50
      ||||||| |||||||   ||||||| |  |||||||| |||||| |||||
seq2  TGGATTC-ACAGAAA--TAATAGGTTA--CTGAAGCA-ATGTGT-CTGGT  43

seq1  GGGGGAATTCTGTGAAAGAGAAACTCCAGACTCTCTGCTTTTCTGTATTT  100
      ||||  |||||| |||||||||  |||||||| ||||| |||||||||||
seq2  GGGG--ATTCTG-GAAAGAGAA--TCCAGACT-TCTGC-TTTCTGTATTT  86

seq1  CATTTGTTGATTGCATTTTTAGCGTGCTGGGAAGGAAATCAGGCACTAAA  150
      ||||   ||| ||||  |||||||||||||  | ||||||| ||||| ||
seq2  CATT--GTGA-TGCA--TTTAGCGTGCTGG--AAGAAATCA-GCACT-AA  127

seq1  CACTGATTATGTAACATCACCCACCCCCAATTCTCTGGAATCCTTTTGAA  200
      |||||| |||||||||||| |||||||    ||||| |||| ||||||||
seq2  CACTGA-TATGTAACATCA-CCACCCC---ATCTCT-GAAT-CTTTTGAA  170

seq1  AGCACACCCACTTATGTATAATTCCACAATCAAAATGCAACCACATTCCA  250
      ||||||||||| ||||||||    |||||||||||||||||||| |||||
seq2  AGCACACCCAC-TATGTATA---TCACAATCAAAATGCAACCAC-TTCCA  215

seq1  AATGGAAAAGAGCTTAAATAGAGACTAGCAGTTAACAACTAGTATTTATT  300
      ||||||||||||| |||||||||||||||||||||||||||||||||| |
seq2  AATGGAAAAGAGC-TAAATAGAGACTAGCAGTTAACAACTAGTATTTA-T  263

seq1  TAAATTCCCTTCTGTTTCCAATTACTGTCTCTAATGTAGAGAAGAACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCCCTTCTGTTTCCAATTACTGTCTCTAATGTAGAGAAGAACAGT  313

seq1  GCAGTACAAGTTTAAATAATTAAATATGCCCCAATAAATAGTTCAGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTACAAGTTTAAATAATTAAATATGCCCCAATAAATAGTTCAGAGCT  363

seq1  TCATATTTTATTTCATAGCTTATAACTGTCTAAAACGAGAATTGAGGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTTATTTCATAGCTTATAACTGTCTAAAACGAGAATTGAGGGTC  413

seq1  TCAGTCTAATGTTTAAATGCACTTCTTCATAGCTCCCTTCTAGAATCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTAATGTTTAAATGCACTTCTTCATAGCTCCCTTCTAGAATCTGA  463

seq1  GGTGGGAATAAGGTTCTGTTGCAGAGTGCTAGCGTGTGTGTATGAGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAATAAGGTTCTGTTGCAGAGTGCTAGCGTGTGTGTATGAGGCCT  513

seq1  AGCTTCAGTTCTCCAAAATTTATGAGTTAATTAATTTTAAAAATCAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAGTTCTCCAAAATTTATGAGTTAATTAATTTTAAAAATCAGATT  563

seq1  TTCATTTGTGCTATTATTATTGAAAATTATGTTAAGTGTCTACGAATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGTGCTATTATTATTGAAAATTATGTTAAGTGTCTACGAATTAT  613

seq1  TTTCTCCTCACTGAAGTGTTTCCTAACTTCAAGAGAAGTCTGTTAGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCACTGAAGTGTTTCCTAACTTCAAGAGAAGTCTGTTAGATAA  663

seq1  AAATAAATAATTCTGATTTTGGTTTTGAGAAATTAAAGCTTTTGTAGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAATTCTGATTTTGGTTTTGAGAAATTAAAGCTTTTGTAGTAC  713

seq1  GTTTTTAGTGCAAGGCATGAAAAGTCAATATTCGAAACAATATTGAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGTGCAAGGCATGAAAAGTCAATATTCGAAACAATATTGAAATC  763

seq1  CAGGCTTCTATTGTCTTCTGAAAGGTACAGTTCTTGGTCTCCACCAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTCTATTGTCTTCTGAAAGGTACAGTTCTTGGTCTCCACCAAGAA  813

seq1  TCATTCAAACCTCTTGAGAAAATGTGTCCAATTATTATTCCAAATTTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAAACCTCTTGAGAAAATGTGTCCAATTATTATTCCAAATTTCTA  863

seq1  TGAACTTAAGTAATGTAATGGAAAATCCAAGGGCTAAGTTATGGTTGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTAAGTAATGTAATGGAAAATCCAAGGGCTAAGTTATGGTTGGAA  913

seq1  TGTACAGTCTGTACAGGAAAGATAATGCAGTTTGCCTAGTTTGCCTAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTCTGTACAGGAAAGATAATGCAGTTTGCCTAGTTTGCCTAGAA  963

seq1  AAAAGAACACTAAAACATAACTTTATGCATTTGAGCAAAACAATACCTTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACACTAAAACATAACTTTATGCATTTGAGCAAAACAATACCTTG  1013

seq1  GAAAGGCAGTAAATATGTCTATGTGGATATGGTAATGGATAGCTGAGTTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCAGTAAATATGTCTATGTGGATATGGTAATGGATAGCTGAGTTC  1063

seq1  AATATAGGTAGCTTCTACTGGTAGTAAGTATAGTGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGGTAGCTTCTACTGGTAGTAAGTATAGTGAATTC  1103