BAC Information

Click to search

BAC

Clone NameB6Ng01-096A05
Chromosome2 (Build37)
Map Location 139,574,524 - 139,575,299
singlet/doubletsinglet
Overlap gene5430433G21Rik
Upstream geneLOC628103, C130053K05Rik, LOC100043792
Downstream geneTasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096A05.bB6Ng01-096A05.g
ACCDH906795DH906796
length1,144782
definitionDH906795|Mus musculus domesticus DNA, BAC clone: B6Ng01-096A05, 5' end.DH906796|Mus musculus domesticus DNA, BAC clone: B6Ng01-096A05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcagttctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccagttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcagtataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctagattttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaaaatagccattt
ttacaatatttatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgagtttttatcatac
agatctttcacctccttagttagagtcacgccaggtattttatattattt
tgtgactattgagaagggggttgtttccctaattcttttccagcctgttt
atccttggtaaaaagaaggcattgacttgttagagtttatttttaatccg
ctacttccccgagcctgttttcaggtttagagttcctcggtaaatttcag
ggtgttaaatatatatctttcgctggaaaagtaattttgactct
gaattcctgttcgtaaggaaattacttaggtgtggtaattctaacaggag
gtttaagggatctgagaggtttgcagcaaactaggttcagtgcctgagag
taagtcatgggggtgggggcgtcctgtgtgcatcctttctgaagcatcag
tgggattagaactaaacaatgaatgaagcaggaaacacacgcttctcctt
ctccttctgagagatgcgtgctccacactccacgcacttaacttaattga
ctctgtgagggagaggcgtcagatctgaacttattgaaacgaatactgag
taacacaaagatgaaatgtcctgcccagtccacatagcaagtcatgattt
aaacccaggcagctggccatctacgagaaggtattgagcattctgccgtc
tcgggcttagtttgtcactcaccagacagctacaagcgccccaccaatcc
ttacccctcatcaccaaggcaaatggctgagcccatggaactcatgcagg
cacatttggatctgatttcgagctgtgaatagtatctggggttttaatat
gttttatgcaccgctacctgctttttactgtttcctctgttggcaagttt
ctacccgagaggagtaatgaagacaagaaggctttgttcaggtgttttgt
tttgtatttggggggggtgaatttttttcatataactgggggaaaatgag
ctcttgttctgtgttttaggaaattgaagattactttcaggacagcggcc
cactggaagtgagtctgcttgcgggtagtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139574524_139575299
seq2: B6Ng01-096A05.g_66_846

seq1  GAATTCCTGTTCGTAAGGAAATTACTTAGGTGTGGTAATTCTAACAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTCGTAAGGAAATTACTTAGGTGTGGTAATTCTAACAGGAG  50

seq1  GTTTAAGGGATCTGAGAGGTTTGCAGCAAACTAGGTTCAGTGCCTGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAGGGATCTGAGAGGTTTGCAGCAAACTAGGTTCAGTGCCTGAGAG  100

seq1  TAAGTCATGGGGGTGGGGGCGTCCTGTGTGCATCCTTTCTGAAGCATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCATGGGGGTGGGGGCGTCCTGTGTGCATCCTTTCTGAAGCATCAG  150

seq1  TGGGATTAGAACTAAACAATGAATGAAGCAGGAAACACACGCTTCTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTAGAACTAAACAATGAATGAAGCAGGAAACACACGCTTCTCCTT  200

seq1  CTCCTTCTGAGAGATGCGTGCTCCACACTCCACGCACTTAACTTAATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTGAGAGATGCGTGCTCCACACTCCACGCACTTAACTTAATTGA  250

seq1  CTCTGTGAGGGAGAGGCGTCAGATCTGAACTTATTGAAACGAATACTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAGGGAGAGGCGTCAGATCTGAACTTATTGAAACGAATACTGAG  300

seq1  TAACACAAAGATGAAATGTCCTGCCCAGTCCACATAGCAAGTCATGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAAAGATGAAATGTCCTGCCCAGTCCACATAGCAAGTCATGATTT  350

seq1  AAACCCAGGCAGCTGGCCATCTACGAGAAGGTATTGAGCATTCTGCCGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGGCAGCTGGCCATCTACGAGAAGGTATTGAGCATTCTGCCGTC  400

seq1  TCGGGCTTAGTTTGTCACTCACCAGACAGCTACAAGCGCCCCACCAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCTTAGTTTGTCACTCACCAGACAGCTACAAGCGCCCCACCAATCC  450

seq1  TTACCCCTCATCACCAAGGCAAATGGCTGAGCCCATGGAACTCATGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCCTCATCACCAAGGCAAATGGCTGAGCCCATGGAACTCATGCAGG  500

seq1  CACATTTGGATCTGATTTCGAGCTGTGAATAGTATCTGGGGTTTTAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGGATCTGATTTCGAGCTGTGAATAGTATCTGGGGTTTTAATAT  550

seq1  GTTTTATGCACCGCTACCTGCTTTTTACTGTTTCCTCTGTTGGCAAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATGCACCGCTACCTGCTTTTTACTGTTTCCTCTGTTGGCAAGTTT  600

seq1  CTACCCGAGAGGAGTAATGAAGACAAGAAGGCTTTGTTCAGGTGTTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCGAGAGGAGTAATGAAGACAAGAAGGCTTTGTTCAGGTGTTTTGT  650

seq1  TTTGTATTTGGGGGGGGTGAATTTTTTTCATATAACTGGGGGAAAATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTGGGGGGGGTGAATTTTTTTCATATAACTGGGGGAAAATGAG  700

seq1  CTCTTGTTCTGTG-TTTAGG-AATTGAAGA-TACTTTCAGGACAGCGG-C  746
      ||||||||||||| |||||| ||||||||| ||||||||||||||||| |
seq2  CTCTTGTTCTGTGTTTTAGGAAATTGAAGATTACTTTCAGGACAGCGGCC  750

seq1  CACT-GAAGTGAGTCTGCTTGCGGGAAGTGA  776
      |||| |||||||||||||||||||| |||||
seq2  CACTGGAAGTGAGTCTGCTTGCGGGTAGTGA  781