BAC Information

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BAC

Clone NameB6Ng01-096A17
Chromosome2 (Build37)
Map Location 32,181,374 - 32,287,690
singlet/doubletdoublet
Overlap geneDnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25
Upstream geneLOC622345, LOC670182, LOC665700, BC034076, Ass1, Fubp3, LOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2
Downstream gene4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096A17.bB6Ng01-096A17.g
ACCDH906815DH906816
length1011,096
definitionDH906815|Mus musculus domesticus DNA, BAC clone: B6Ng01-096A17, 5' end.DH906816|Mus musculus domesticus DNA, BAC clone: B6Ng01-096A17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,181,374 - 32,181,474)(32,286,602 - 32,287,690)
sequence
aaagcagcctgggctatgtaagtcctaacactcacacatacacagttgga
gggacacagttggagggggacagttggagggagagaggaatggaggggag
a
gaattctcaaaaataaaggaaaacttaaaaaagcaacagtttgggaaatt
agttcatacataatgaacatgtttgtttatctgtaagattctgtgtattt
ctcacatatacaatgtatctacagaataagctaaacgtggggctgcaatg
tagagggctggagcttttggagagctggtacctgtagctacatttctttc
cttgtagtagtgggtaggttgcaggtatccccatcctctcccaagagttt
gatgagcttggaggggtgcatcttttaatgtaattttattcatgtatttg
tgtaattatgtgctgttcatgtaaatatctgtgggcacgagtgtgtgagg
aatagattctaggttcacgctatgggtccgagattgaactcagatcagca
ggccttggcaggtgcctttaccagctttaggcatcttcccaggcttggac
ttacagtttaaaaatagaatgatactgaacattttgattgctattgggag
ggatgataggtggtctctacatttgtctgctgttaaactaaaaacagcta
aagattaatcatggtaatttgcccagcgaagtggaagatgtgtctgaatc
tggtttgagggctgggggtaaatgggtgagcagtgtctctggctgacaag
gcagtgtgctctcttggagacaactatcaatgcaggcttgcttcctgcta
ggcttgggctggagaagattgaatactgggaggaggtagtggtgttagtc
aattgcggtgttgctaaaggaccctggatcattctgaatatggtgagtgg
cattctggaagcttaccctggggagaacgggaagttgcttctaaaggtga
gcttgctcagattctgcaaaatgaacctggtctgtacctcccagttgact
agctgggctgcaagcaggaaatacttccgcttgtgattggaggttgatgc
tggtcgggatatgaacccagagtgttcggcagaggttgatttggccaggt
ctctgctgcatgagaatgcagactagatgctctgtcctatagtttacgga
attgagcggagggacgacttgaatgactgggaagccccagttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32181374_32181474
seq2: B6Ng01-096A17.b_49_149

seq1  AAAGCAGCCTGGGCTATGTAAGTCCTAACACTCACACATACACAGTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCCTGGGCTATGTAAGTCCTAACACTCACACATACACAGTTGGA  50

seq1  GGGACACAGTTGGAGGGGGACAGTTGGAGGGAGAGAGGAATGGAGGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACAGTTGGAGGGGGACAGTTGGAGGGAGAGAGGAATGGAGGGGAG  100

seq1  A  101
      |
seq2  A  101

seq1: chr2_32286602_32287690
seq2: B6Ng01-096A17.g_70_1165 (reverse)

seq1  AAACAACTTGGGGCTCCCAGTCATTC-AGTCGTCC--TCGCTC-ATTCCG  46
      |||||||| |||  |||||||||||| ||||||||   ||||| ||||||
seq2  AAACAACTGGGGCTTCCCAGTCATTCAAGTCGTCCCTCCGCTCAATTCCG  50

seq1  TAAAC-CTAGGACAGAGCATCTAGTCTGCATTCTCACTGCAGCAG-GACC  94
      |||||  ||||||||||||||||||||||||||||| |||||||| ||||
seq2  TAAACTATAGGACAGAGCATCTAGTCTGCATTCTCA-TGCAGCAGAGACC  99

seq1  TGGCC-AATC-ACCTCTGCCG-ACACTACTGGGTTCATTATCCCGACCAG  141
      ||||| |||| |||||||||| ||||| ||||||||| ||||||||||||
seq2  TGGCCAAATCAACCTCTGCCGAACACT-CTGGGTTCA-TATCCCGACCAG  147

seq1  CATCAACCCTCCAATCACAGGCGG-AGTATTTCCTGCTTGCAGCCCAGCT  190
      |||||| |||||||||||| |||| |||||||||||||||||||||||||
seq2  CATCAA-CCTCCAATCACAAGCGGAAGTATTTCCTGCTTGCAGCCCAGCT  196

seq1  AGTCCACTGGGAGGTACAGACCAGGTTCATTTTGCAGAATCTGAGCAAGC  240
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACTGGGAGGTACAGACCAGGTTCATTTTGCAGAATCTGAGCAAGC  246

seq1  TCATCTTTAGAAGCAACTTCCCGTTCTCCCCAGGGTAAGCTTCCAGAATG  290
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTTAGAAGCAACTTCCCGTTCTCCCCAGGGTAAGCTTCCAGAATG  296

seq1  CCACTCACCATATTCAGAATGATCCAGGGTCC-TTAGCAACACCGCAATT  339
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCACTCACCATATTCAGAATGATCCAGGGTCCTTTAGCAACACCGCAATT  346

seq1  GACTAACACCACTACCTCCTCCCAGTATTCAATCTTCTCCAGCCCAAGCC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACACCACTACCTCCTCCCAGTATTCAATCTTCTCCAGCCCAAGCC  396

seq1  TAGCAGGAAGCAAGCCTGCATTGATAGTTGTCTCCAAGAGAGCACACTGC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGAAGCAAGCCTGCATTGATAGTTGTCTCCAAGAGAGCACACTGC  446

seq1  CTTGTCAGCCAGAGACACTGCTCACCCATTTACCCCCAGCCCTCAAACCA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAGCCAGAGACACTGCTCACCCATTTACCCCCAGCCCTCAAACCA  496

seq1  GATTCAGACACATCTTCCACTTCGCTGGGCAAATTACCATGATTAATCTT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGACACATCTTCCACTTCGCTGGGCAAATTACCATGATTAATCTT  546

seq1  TAGCTGTTTTTAGTTTAACAGCAGACAAATGTAGAGACCACCTATCATCC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTTTTTAGTTTAACAGCAGACAAATGTAGAGACCACCTATCATCC  596

seq1  CTCCCAATAGCAATCAAAATGTTCAGTATCATTCTATTTTTAAACTGTAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATAGCAATCAAAATGTTCAGTATCATTCTATTTTTAAACTGTAA  646

seq1  GTCCAAGCCTGGGAAGATGCCTAAAGCTGGTAAAGGCACCTGCCAAGGCC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGCCTGGGAAGATGCCTAAAGCTGGTAAAGGCACCTGCCAAGGCC  696

seq1  TGCTGATCTGAGTTCAATCTCGGACCCATAGCGTGAACCTAGAATCTATT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATCTGAGTTCAATCTCGGACCCATAGCGTGAACCTAGAATCTATT  746

seq1  CCTCACACACTCGTGCCCACAGATATTTACATGAACAGCACATAATTACA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACACACTCGTGCCCACAGATATTTACATGAACAGCACATAATTACA  796

seq1  CAAATACATGAATAAAATTACATTAAAAGATGCACCCCTCCAAGCTCATC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACATGAATAAAATTACATTAAAAGATGCACCCCTCCAAGCTCATC  846

seq1  AAACTCTTGGGAGAGGATGGGGATACCTGCAACCTACCCACTACTACAAG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTGGGAGAGGATGGGGATACCTGCAACCTACCCACTACTACAAG  896

seq1  GAAAGAAATGTAGCTACAGGTACCAGCTCTCCAAAAGCTCCAGCCCTCTA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAATGTAGCTACAGGTACCAGCTCTCCAAAAGCTCCAGCCCTCTA  946

seq1  CATTGCAGCCCCACGTTTAGCTTATTCTGTAGATACATTGTATATGTGAG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGCCCCACGTTTAGCTTATTCTGTAGATACATTGTATATGTGAG  996

seq1  AAATACACAGAATCTTACAGATAAACAAACATGTTCATTATGTATGAACT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACAGAATCTTACAGATAAACAAACATGTTCATTATGTATGAACT  1046

seq1  AATTTCCCAAACTGTTGCTTTTTTAAGTTTTCCTTTATTTTTGAGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCCAAACTGTTGCTTTTTTAAGTTTTCCTTTATTTTTGAGAATTC  1096