BAC Information

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BAC

Clone NameB6Ng01-096M15
Chromosome2 (Build37)
Map Location 17,666,045 - 17,830,885
singlet/doubletdoublet
Overlap geneLOC100041319, LOC100041047
Upstream genePlxdc2, 4930515L03Rik, LOC383665, Nebl
Downstream gene1700113O17Rik, A930004D18Rik, 2810030E01Rik, Mllt10, LOC641254, Dnajc1, LOC100041388, LOC623325, LOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479, Pip5k2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096M15.bB6Ng01-096M15.g
ACCDH907337DH907338
length408172
definitionDH907337|Mus musculus domesticus DNA, BAC clone: B6Ng01-096M15, 5' end.DH907338|Mus musculus domesticus DNA, BAC clone: B6Ng01-096M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,830,472 - 17,830,885)(17,666,045 - 17,666,216)
sequence
caaacccaccttctagctactggacttagccatcctctagaaaaatatac
actgttagaaatatatttggtgtgggtggggcagggagatggttcagttg
ttaagagcataagaacactggtgtctgccccagaggactaggattcaatt
tccagcatccacagccatctgtgacctcagttccaggggacctatggctc
cttctgacctccatgggcaccagacatccatgtagtacaaagacatacat
gcaggaaaaagcacctacacacataaaataaaattaaatgaataaatatc
ctttgaaaagtatacctaacaagtaaaattcgagtatgtttattgtaagc
tacaggatattttgaaacatgtatgtatatatgtatgtatgtatgtatgt
atgtatgt
ctcagaacgagtattacaaatggctatgaactgctgccatgcgggtgctg
ggaaccaaacccaggtcctccacatgaagaggaaccaatcgctttaacct
acagcagccctgcagaactcttttctatccattgctctttttttttcttt
ttttttttggggggggggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_17830472_17830885
seq2: B6Ng01-096M15.b_48_461 (reverse)

seq1  ACATACATACATACATACATACATACATATATACATACATGTTTCAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATACATACATACATACATATATACATACATGTTTCAAAAT  50

seq1  ATCCTGTAGCTTACAATAAACATACTCGAATTTTACTTGTTAGGTATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTAGCTTACAATAAACATACTCGAATTTTACTTGTTAGGTATACT  100

seq1  TTTCAAAGGATATTTATTCATTTAATTTTATTTTATGTGTGTAGGTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGGATATTTATTCATTTAATTTTATTTTATGTGTGTAGGTGCTT  150

seq1  TTTCCTGCATGTATGTCTTTGTACTACATGGATGTCTGGTGCCCATGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGCATGTATGTCTTTGTACTACATGGATGTCTGGTGCCCATGGAG  200

seq1  GTCAGAAGGAGCCATAGGTCCCCTGGAACTGAGGTCACAGATGGCTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAGGAGCCATAGGTCCCCTGGAACTGAGGTCACAGATGGCTGTGG  250

seq1  ATGCTGGAAATTGAATCCTAGTCCTCTGGGGCAGACACCAGTGTTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGAAATTGAATCCTAGTCCTCTGGGGCAGACACCAGTGTTCTTAT  300

seq1  GCTCTTAACAACTGAACCATCTCCCTGCCCCACCCACACCAAATATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAACAACTGAACCATCTCCCTGCCCCACCCACACCAAATATATTT  350

seq1  CTAACAGTGTATATTTTTCTAGAGGATGGCTAAGTCCAGTAGCTAGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGTGTATATTTTTCTAGAGGATGGCTAAGTCCAGTAGCTAGAAGG  400

seq1  TGGGTTTGGAATTC  414
      ||||||||||||||
seq2  TGGGTTTGGAATTC  414

seq1: chr2_17666045_17666216
seq2: B6Ng01-096M15.g_73_244

seq1  CTCAGAACGAGTATTACAAATGGCTATGAACTGCTGCCATGCGGGTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAACGAGTATTACAAATGGCTATGAACTGCTGCCATGCGGGTGCTG  50

seq1  GGAACCAAACCCAGGTCCTCCACATGAAGAGGAACCAATCGCTTTAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAAACCCAGGTCCTCCACATGAAGAGGAACCAATCGCTTTAACCT  100

seq1  ACAGCAGCCCTGCAGAACTCTTTTCTATCCATTGCTCTTTTTTTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCCCTGCAGAACTCTTTTCTATCCATTGCTCTTTTTTTTTCTTT  150

seq1  TTTTTTTTGGGGGGGGGGTTGG  172
      ||||||||||||||||||||||
seq2  TTTTTTTTGGGGGGGGGGTTGG  172