BAC Information

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BAC

Clone NameB6Ng01-097A09
Chromosome2 (Build37)
Map Location 84,113,722 - 84,115,010
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725
Downstream geneCalcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097A09.bB6Ng01-097A09.g
ACCDH907506DH907507
length1,2751,175
definitionDH907506|Mus musculus domesticus DNA, BAC clone: B6Ng01-097A09, 5' end.DH907507|Mus musculus domesticus DNA, BAC clone: B6Ng01-097A09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggaaagcaatacttggaagacaattgttcagcaagaaaacat
ggctttatggcaccaggaaagcagagcgtggcatgtgcaaccaatatcct
ttctaagctttgcagtcagcatactggaatgaattacagtcttgtctgtt
atatcttaacaccagattgaatctttcccctaatgatctctgtatacaga
gtcagatacagataataaaataatcacagacaaacatctactgtttatat
atttgataatcaaggaacacatggttcttttattgaatactaattccgtt
gtatacatttgtgatagcctgttccataatacaactgggtgggcccaggc
aatgatacactaggctataatcatgttatctggatgcctgtattcactgg
gccagtgtttttcctttcccatgagaaccttatgctctcataaagcatca
aataactcatctctcctgactgaaaagcaagtcatctacaatgcaggttt
caagaaaatggggacacaaagcttgttgcctcctagaaagaaacgctctc
atgctttgtgctgatgctggctctgtggctgccctgtcctccatgaatta
ctaatgtcttcataaatctttctaaagcactgtgcctgaacaccctgaaa
cagatcgtgtaatctcagtgtctaaaaagaacatctccccagaacgatgt
gtgcagtatattctccactacagttatcttctcttccagtctccacattc
gaggcgagcatgtttccaagctctcctctacctcaggggaagtttgctca
aagcctttctgtgcttttaaatgtcacctcggcttccagaatcctccctt
taaaaattcattcctccaacatactcctccttactctcacatttcattat
ccacttatcctacagataaatctataaggcatgaggtttggagtagtgct
ttgtatatgtttttttttttaaaaaccttaaaaaatcactattagtaaga
ttcaaattccctcaaaccatgtgcaagcagagcgcccaacagtttcagta
ttttgtgcttgaaaagaaataggattaaggaagaagttttgttctcactt
ctaaagaagtaattttgttttgttgtcccattaggcacctctcagctgta
aagttaggaaaaactctcgcatgtggtttaaccttgaagcaaaaggttgg
atgtgcaggaaactcatggaataataataccctaataccaataaaaagtg
aaccgttacctctcagaaaattaat
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctcgcgaggatgtagagaaagaggaacactcctccattgttggtg
ggattgcaagctagtacaacactctggaaatcagtctggcggttcctcag
aaaattgtacattgtactacggaggatcccgcaatacctctcttgggcat
atatccagaagatgtcccaactggtaagaaggacacatgctccactatgt
tcatagcagccttatttataatagccagaaactggaaagaacccagatgc
ccctcaacagaggaatggaacagaaaatgtggtaaatttacacaatggag
tactactcctctattaaaaagaatgaatttatgaaattcctaggcaaatg
gatggacctggagggcatcatcctgagtgaggtaacaaaggaacttgcac
aatatgtactcactgataagtggatattagcccagaaacttaggatacac
aagatataagatacaatttgctaaatgcatgaaactcaagaagaacgaag
accaaagtgtggacactttgccccttcttagaaatgggaacaaaacaccc
ttggaaggagttacaaagacaaaatttggagctgtgacgaaaggatggac
catctagtgattgccatatccagggatccatcccataatcagcttccaaa
tgctgacaccattgcataccctagcaagattttgctgaaaggacccagat
atagctgtctcttgtgagactatgccggggcctagcaaacacagaagtgg
atgttctcagtcagctattggatgggtaacatgggccccaatggaggagc
tagagaaagtacccaaggagctaaagggaactgcaaccctataggtggaa
caacatatgagctaaccagtaccccggagtcttgtctctagctgcttttg
tatcaaaaaatggcctagtcgtcatcacaaggatgagaggccctttggac
tgcaaacttttttatgttcccagtacagggaccgccaaggccaaagggga
ggttgtggtggtgggttgtgggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84113722_84115010
seq2: B6Ng01-097A09.b_44_1318 (reverse)

seq1  ATTAATTTTCTGATAGTTACAGGTTCAACATTATTTATTTAGTTATTTAG  50
      ||||||||||||| || ||  ||||   || | ||||||  | ||||  |
seq2  ATTAATTTTCTGAGAGGTAACGGTT---CACTTTTTATT--GGTATTAGG  45

seq1  TTATTTATTTATTTCCAATGAGATTTCTATCACTATCAAAACATTTTGCT  100
       ||||   |||||  | ||||| ||||   ||| |||  ||| |||||||
seq2  GTATT--ATTATT--CCATGAG-TTTCCTGCAC-ATC-CAACCTTTTGCT  88

seq1  TCAGAAGTTAAACCACATGC-AGAGTTATTCCTAACCTGTACAGCTGAGA  149
      ||| | |||||||||||||| |||||| ||||||| || |||||||||||
seq2  TCA-AGGTTAAACCACATGCGAGAGTTTTTCCTAA-CTTTACAGCTGAGA  136

seq1  GTTGCCTTATGTGAC-ACAAAACAATATTACCTTCTTTAG-AGTGAGAAC  197
      | ||||| ||| ||| ||||||||| |||| ||||||||| |||||||||
seq2  GGTGCCTAATGGGACAACAAAACAAAATTA-CTTCTTTAGAAGTGAGAAC  185

seq1  AAAACTTCTCCCTTAATCCTATTTCTTTTCAAGCAC-AAATACTGAAACT  246
      ||||||||| |||||||||||||||||||||||||| |||||||||||| 
seq2  AAAACTTCTTCCTTAATCCTATTTCTTTTCAAGCACAAAATACTGAAAC-  234

seq1  TGTTGGGCGCTCCTGCTTGCACCATGGTTTGAGGG-ATTTGAATCTTACT  295
      ||||||||||| ||||||||| ||||||||||||| ||||||||||||||
seq2  TGTTGGGCGCT-CTGCTTGCA-CATGGTTTGAGGGAATTTGAATCTTACT  282

seq1  AATAGTGATTTTTTTAAGGTTTTTAAAAAAAAAAACATATACAAAGCACT  345
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGA-TTTTTTAAGGTTTTTAAAAAAAAAAACATATACAAAGCACT  331

seq1  ACTCCAAACCTCATGCCTTATAGATTTATCTGTAGGATAAGTGGATAATG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAACCTCATGCCTTATAGATTTATCTGTAGGATAAGTGGATAATG  381

seq1  AAATGTGAGAGTAAGGAGGAGTATGTTGGAGGAATGAATTTTTAAAGGGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGAGAGTAAGGAGGAGTATGTTGGAGGAATGAATTTTTAAAGGGA  431

seq1  GGATTCTGGAAGCCGAGGTGACATTTAAAAGCACAGAAAGGCTTTGAGCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTGGAAGCCGAGGTGACATTTAAAAGCACAGAAAGGCTTTGAGCA  481

seq1  AACTTCCCCTGAGGTAGAGGAGAGCTTGGAAACATGCTCGCCTCGAATGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCCCTGAGGTAGAGGAGAGCTTGGAAACATGCTCGCCTCGAATGT  531

seq1  GGAGACTGGAAGAGAAGATAACTGTAGTGGAGAATATACTGCACACATCG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTGGAAGAGAAGATAACTGTAGTGGAGAATATACTGCACACATCG  581

seq1  TTCTGGGGAGATGTTCTTTTTAGACACTGAGATTACACGATCTGTTTCAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGAGATGTTCTTTTTAGACACTGAGATTACACGATCTGTTTCAG  631

seq1  GGTGTTCAGGCACAGTGCTTTAGAAAGATTTATGAAGACATTAGTAATTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCAGGCACAGTGCTTTAGAAAGATTTATGAAGACATTAGTAATTC  681

seq1  ATGGAGGACAGGGCAGCCACAGAGCCAGCATCAGCACAAAGCATGAGAGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGACAGGGCAGCCACAGAGCCAGCATCAGCACAAAGCATGAGAGC  731

seq1  GTTTCTTTCTAGGAGGCAACAAGCTTTGTGTCCCCATTTTCTTGAAACCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTCTAGGAGGCAACAAGCTTTGTGTCCCCATTTTCTTGAAACCT  781

seq1  GCATTGTAGATGACTTGCTTTTCAGTCAGGAGAGATGAGTTATTTGATGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTAGATGACTTGCTTTTCAGTCAGGAGAGATGAGTTATTTGATGC  831

seq1  TTTATGAGAGCATAAGGTTCTCATGGGAAAGGAAAAACACTGGCCCAGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGAGCATAAGGTTCTCATGGGAAAGGAAAAACACTGGCCCAGTG  881

seq1  AATACAGGCATCCAGATAACATGATTATAGCCTAGTGTATCATTGCCTGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGGCATCCAGATAACATGATTATAGCCTAGTGTATCATTGCCTGG  931

seq1  GCCCACCCAGTTGTATTATGGAACAGGCTATCACAAATGTATACAACGGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCCAGTTGTATTATGGAACAGGCTATCACAAATGTATACAACGGA  981

seq1  ATTAGTATTCAATAAAAGAACCATGTGTTCCTTGATTATCAAATATATAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTATTCAATAAAAGAACCATGTGTTCCTTGATTATCAAATATATAA  1031

seq1  ACAGTAGATGTTTGTCTGTGATTATTTTATTATCTGTATCTGACTCTGTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGATGTTTGTCTGTGATTATTTTATTATCTGTATCTGACTCTGTA  1081

seq1  TACAGAGATCATTAGGGGAAAGATTCAATCTGGTGTTAAGATATAACAGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGATCATTAGGGGAAAGATTCAATCTGGTGTTAAGATATAACAGA  1131

seq1  CAAGACTGTAATTCATTCCAGTATGCTGACTGCAAAGCTTAGAAAGGATA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTGTAATTCATTCCAGTATGCTGACTGCAAAGCTTAGAAAGGATA  1181

seq1  TTGGTTGCACATGCCACGCTCTGCTTTCCTGGTGCCATAAAGCCATGTTT  1245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGCACATGCCACGCTCTGCTTTCCTGGTGCCATAAAGCCATGTTT  1231

seq1  TCTTGCTGAACAATTGTCTTCCAAGTATTGCTTTCCCTGAATTC  1289
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGAACAATTGTCTTCCAAGTATTGCTTTCCCTGAATTC  1275