BAC Information

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BAC

Clone NameB6Ng01-097E22
Chromosome2 (Build37)
Map Location 115,804,458 - 115,906,726
singlet/doubletdoublet
Overlap geneMrg1, G630016G05Rik, 2810405F15Rik
Upstream geneLOC100043232, LOC100043236, BC052040
Downstream geneLOC433464, Tmco5, LOC100043557, LOC241621
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097E22.bB6Ng01-097E22.g
ACCDH907718DH907719
length1,188550
definitionDH907718|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E22, 5' end.DH907719|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,804,458 - 115,805,634)(115,906,193 - 115,906,726)
sequence
gaattcccagagggctttgagtagtggtggtgaagtgtcaccaggaaacc
cgggtgtctgggggccgttttttgtcactttgcttcaaaagcaactgtga
tctgcttcaaagaaccttttaaaaccacatgactttgatatgcatgtaag
cgtagactctgttacaagaggcaaaaaaccacaagacctttatctgtact
tcaaagtcagcagggaagtgtaggcacaggtaatcttccaattgccaagc
taataatgctcaaatcccaagctcggcaaggcctaagtgtagacatagtt
cagtctatgtgaaagggaaggaaatggtggctacagtcttgaggggcatc
ataatatcaggatgattcagccacgagcgagagatgacagaagaaatggg
acaaagcagccaaagagacaagaaagaccccaggaggagaaataaaatct
gcagatgctgttctggtatctgaccatgccatcccgactgcattgccatc
tgaactcaattctggaattttcatcttcagacttaagagatttcgaggtt
gctgacaggcctcaagcaggtttcgtagactatccaatcagaacttctct
ataaagtttggtaatgtgaaaccaactacaagaaacaggttacttcaatt
attggccccaactctcactaggtagcaatcaacagttctgttaatgccaa
agaggaatgagcctcggggagtatttatttctcccttaggccaaggaggt
ctctggttggaggtgttggctagcttatcagcatccttgatctgaactac
aggcttgaacagcctggaaagaaaaagagactacagctgtaccaaaatgt
gcattctttgaagcaccctcctcccaaacgctcaatctgagacatttagg
aaaacagtcttttccaaaatcacatttttgctcacattacgcaaagctct
tcatgggatccgaacttctgtacgttccggaagctgtaactgacttgttc
acatttagggcagttatcagctttcccaaggaccaaaaagaataaagaga
taaaataagatttccaacgcgtcccaagaacctgttggaagaatgaaggg
taacacacagcctaaaaggcactggctttctgcttatgtaaattcagagc
tggtcacggcatgccatgaatccagtctcacggggtac
agtaaaaagaaagagagagagagagagagagagagagagagagagagaga
gagagaggagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaga
aagagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gagagggagagagagggagagaaagaaagagagaaagagaaagaaagaaa
gagagtgagaaagaaagaaataagaaagaaagagggagagagaaagaaag
aaagagagagaaagaaagaaaggagaaagaagaaagaaagagagagagaa
agaaagagagaaagagaaaggaaggaagaaagaaagaaataggaaagaaa
gaaagagagagaaaggaagaagaaagagagaaagaaagaaagaaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagagagagagggaga
gagaggaaggaaggaagaagtacaaaagaaatgagaaagagagaaagaaa
aagggagggagggaagctgaagttgggagggagaatgttgggagaggtct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115804458_115805634
seq2: B6Ng01-097E22.b_51_1238

seq1  GAATTCCCAGAGGGCTTTGAGTAGTGGTGGTGAAGTGTCACCAGGAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAGGGCTTTGAGTAGTGGTGGTGAAGTGTCACCAGGAAACC  50

seq1  CGGGTGTCTGGGGGCCGTTTTTTGTCACTTTGCTTCAAAAGCAACTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGTCTGGGGGCCGTTTTTTGTCACTTTGCTTCAAAAGCAACTGTGA  100

seq1  TCTGCTTCAAAGAACCTTTTAAAACCACATGACTTTGATATGCATGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCAAAGAACCTTTTAAAACCACATGACTTTGATATGCATGTAAG  150

seq1  CGTAGACTCTGTTACAAGAGGCAAAAAACCACAAGACCTTTATCTGTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGACTCTGTTACAAGAGGCAAAAAACCACAAGACCTTTATCTGTACT  200

seq1  TCAAAGTCAGCAGGGAAGTGTAGGCACAGGTAATCTTCCAATTGCCAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTCAGCAGGGAAGTGTAGGCACAGGTAATCTTCCAATTGCCAAGC  250

seq1  TAATAATGCTCAAATCCCAAGCTCGGCAAGGCCTAAGTGTAGACATAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGCTCAAATCCCAAGCTCGGCAAGGCCTAAGTGTAGACATAGTT  300

seq1  CAGTCTATGTGAAAGGGAAGGAAATGGTGGCTACAGTCTTGAGGGGCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTATGTGAAAGGGAAGGAAATGGTGGCTACAGTCTTGAGGGGCATC  350

seq1  ATAATATCAGGATGATTCAGCCACGAGCGAGAGATGACAGAAGAAATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATCAGGATGATTCAGCCACGAGCGAGAGATGACAGAAGAAATGGG  400

seq1  ACAAAGCAGCCAAAGAGACAAGAAAGACCCCAGGAGGAGAAATAAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCAGCCAAAGAGACAAGAAAGACCCCAGGAGGAGAAATAAAATCT  450

seq1  GCAGATGCTGTTCTGGTATCTGACCATGCCATCCCGACTGCATTGCCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGCTGTTCTGGTATCTGACCATGCCATCCCGACTGCATTGCCATC  500

seq1  TGAACTCAATTCTGGAATTTTCATCTTCAGACTTAAGAGATTTCGAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAATTCTGGAATTTTCATCTTCAGACTTAAGAGATTTCGAGGTT  550

seq1  GCTGACAGGCCTCAAGCAGGTTTCGTAGACTATCCAATCAGAACTTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAGGCCTCAAGCAGGTTTCGTAGACTATCCAATCAGAACTTCTCT  600

seq1  ATAAAGTTTGGTAATGTGAAACCAACTACAAGAAACAGGTTACTTCAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTTGGTAATGTGAAACCAACTACAAGAAACAGGTTACTTCAATT  650

seq1  ATTGGCCCCAACTCTCACTAGGTAGCAATCAACAGTTCTGTTAATGCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCCCAACTCTCACTAGGTAGCAATCAACAGTTCTGTTAATGCCAA  700

seq1  AGAGGAATGAGCCTCGGGGAGTATTTATTTCTCCCTTAGGCCAAGGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATGAGCCTCGGGGAGTATTTATTTCTCCCTTAGGCCAAGGAGGT  750

seq1  CTCTGGTTGGAGGTGTTGGCTAGCTTATCAGCATCCTTGATCTGAACTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTGGAGGTGTTGGCTAGCTTATCAGCATCCTTGATCTGAACTAC  800

seq1  AGGCTTGAACAGCCTGGAAAGAAAAAGAGACTACAGCTGTACCAAAATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGAACAGCCTGGAAAGAAAAAGAGACTACAGCTGTACCAAAATGT  850

seq1  GCATTCTTTGAAGCAACCTCCTCCCAAACGCTCAATCTGAGACATTTAGG  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCATTCTTTGAAGCACCCTCCTCCCAAACGCTCAATCTGAGACATTTAGG  900

seq1  AAAACAGTCTTTTCCAAAATCACATTTTTGCTCACATTACGCAAAGCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGTCTTTTCCAAAATCACATTTTTGCTCACATTACGCAAAGCTCT  950

seq1  TCATGGGATCCGAACTTCTGTACGTTCCGAAGGCTGTAACTGAC-TGTCC  999
      ||||||||||||||||||||||||||||| | |||||||||||| ||| |
seq2  TCATGGGATCCGAACTTCTGTACGTTCCGGAAGCTGTAACTGACTTGTTC  1000

seq1  ACATTTAGGGCAG-TATCAGC-TTCCCAA-GACCAAAAAG-ATAAAGAAA  1045
      ||||||||||||| ||||||| ||||||| |||||||||| ||||||| |
seq2  ACATTTAGGGCAGTTATCAGCTTTCCCAAGGACCAAAAAGAATAAAGAGA  1050

seq1  TAAAAAATAAAAAAATTCC-ACGCGTCCCAAGA--CTG-TGGA--GATGA  1089
      ||||    | || | |||| |||||||||||||  ||| ||||   ||||
seq2  TAAA----ATAAGATTTCCAACGCGTCCCAAGAACCTGTTGGAAGAATGA  1096

seq1  --GGTAACACACAGCCTAGAGGGCACT-GCTTTCTGCTTTATGTAAA-TC  1135
        |||||||||||||||| | |||||| ||||||||| ||||||||| ||
seq2  AGGGTAACACACAGCCTAAAAGGCACTGGCTTTCTGC-TTATGTAAATTC  1145

seq1  AGAGCCTGTCACGGCATG-CATG-ATTCAGTGCTCACGGTGTAC  1177
      |||||  ||||||||||| |||| || |||| ||||||| ||||
seq2  AGAGCTGGTCACGGCATGCCATGAATCCAGT-CTCACGGGGTAC  1188

seq1: chr2_115906193_115906726
seq2: B6Ng01-097E22.g_89_622 (reverse)

seq1  AGACCTCTCCCAACATTCTCCCTCCCAACTTCAGCTTCCCTCCCTCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCTCCCAACATTCTCCCTCCCAACTTCAGCTTCCCTCCCTCCCTT  50

seq1  TTTCTTTCTCTCTTTCTCATTTCTTTTGTACTTCTTCCTTCCTTCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTCTCTTTCTCATTTCTTTTGTACTTCTTCCTTCCTTCCTCTC  100

seq1  TCTCCCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  150

seq1  TTTCTTTTCTTTCTTTCTTTCTCTCTTTCTTCTTCCTTTCTCTCTCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTCTTTCTTTCTCTCTTTCTTCTTCCTTTCTCTCTCTTTC  200

seq1  TTTCTTTCCTATTTCTTTCTTTCTTCCTTCCTTTCTCTTTCTCTCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCTATTTCTTTCTTTCTTCCTTCCTTTCTCTTTCTCTCTTTCT  250

seq1  TTCTCTCTCTCTTTCTTTCTTCTTTCTCCTTTCTTTCTTTCTCTCTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTCTTTCTTTCTTCTTTCTCCTTTCTTTCTTTCTCTCTCTTT  300

seq1  CTTTCTTTCTCTCTCCCTCTTTCTTTCTTATTTCTTTCTTTCTCACTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTCTCTCCCTCTTTCTTTCTTATTTCTTTCTTTCTCACTCTC  350

seq1  TTTCTTTCTTTCTCTTTCTCTCTTTCTTTCTCTCCCTCTCTCTCCCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTCTTTCTCTCTTTCTTTCTCTCCCTCTCTCTCCCTCTC  400

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTT  450

seq1  TCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCCTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCCTCTCTC  500

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  534
      ||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  534