BAC Information

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BAC

Clone NameB6Ng01-097K12
Chromosome2 (Build37)
Map Location 67,831,444 - 67,955,834
singlet/doubletdoublet
Overlap geneLOC227995, B3galt1
Upstream geneGm1322, Cmya3, LOC621171
Downstream geneStk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097K12.bB6Ng01-097K12.g
ACCDH907965DH907966
length1,1161,121
definitionDH907965|Mus musculus domesticus DNA, BAC clone: B6Ng01-097K12, 5' end.DH907966|Mus musculus domesticus DNA, BAC clone: B6Ng01-097K12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,831,444 - 67,832,603)(67,954,704 - 67,955,834)
sequence
gaattcaaccagtgaactcattgttataaattccttgtcccaaagcagtt
aatgatggatattttttcctttgttgaaagtgcttccatagaacagagat
taaaaataccaaagttattttcttctttaactcttttgatgtagctgtcc
tcacaaagtcagtttttataaggcaaaagaaagtatgaggtcaaaggttc
ttagcttcactgaaaatgtactttgtgcatttggctggcttccttacctg
aaaaatgggctgggacttctttaatttctgtgaaacagatgatgaaattg
tggcaaaatggcatgttataatttcctgagtcatatcaggaacacacaca
cacatacgcacaccaccaccaccaccaccaccaccaccaacaacaacaaa
attccacattaaacacagatgtttgactgcagaggctagagctctgaaat
attgaatgagttaatagttggtcaaatgagtatattcagtggaagtgtat
tagaagagaaacacactgtttcaactctacatcttacagttttacaaaga
tacagataaattagaatattcttagcaaaaggcaactcaaatgtcagagg
actcacaactacttcagttaaagaaggaccttgatgactagcaacactca
acctggagaagaaaattcttactacctggatgccttaagatgtttaaaga
gctatactggaggaaatgaggcagagaatggagggccctgcaagagattg
tctacaaggttctttgacaggctctttttatgatatatccctcagactcc
taagaagtggagccattgggcatgacttgtgagatgagcaggagattgaa
ttttctcttagtgcaatctgatggtagctgttgtaacttagatttaactc
atccacggggatcctggtttagatagaaagaagaaagaagaaagaaagaa
gaaagaatgtaagaagagtaagagagaatgaggagaggaggagagagaac
actgagcagtgttgaagaattgattatgagtgtgcaatggacttattgct
tctgacccagagttcaatacattattgctcatggagtacccgcatattgc
taggatttctcaggca
gaattcactttactttcttccaaacctgctggaagctccatgcctcagaa
atcttccccagaactctgcaaaatcaataaagtacagttttattcatgtt
tacctagccattttcatattcttgaataaacacagtaagggtgtaagaat
tgccagcaatgactaaagtaagcacggtcattcatcttcagaagccccgg
aaataacctcctagcttctcctctcccatgaacagaaattgtttatgtgt
attgatattcaatacatgaatacattgaccacgagcactggtgactggag
taaagctaacatcagtaattttccacaaagggtctgcttctttacaaaag
gctatttttttttgcagttaggcacaatttttgctcttaaatctttcaga
caagctcacatacaattcagattgctttcatttttctgactttgagcttt
taattgtttgattaaaaaaattaacctttgggctggtgagatggctcagc
gggtaagagcaccaactgctcttttgaaggtcctgagttcaattcccagc
aaccacatggtagctcacaatcactaatagtgagatctgacaccctctac
tgacacgtctgaagacagctacagtgtacttatgtataataataaataaa
tctttgggccagagtgggcctgagcagagtgagtggggttgaccagggca
agcagagtccctaaaaattcaatttccaacaagcacatgaaggctcacaa
ccatctgtaaagctacagtgtactcacatacataaaataaatacatatct
aaatctttaaaaatttgacctttaacatttcttagttttctccaattctc
catttgagactgtgttgataactgcccacaaactttttctaataccttgc
tttctaggaagacttgctgcctgttcctgatttggcagtgggcacagctc
ttaccatgcaatctgctttcttcaaggctttggaaaatagacttattctt
tgatggctgggaataaagtaccttccaaagaacccatttactgaaaggtt
tggcccttggaaaggtggacatagcttgaggaggaggtccaaacatagct
tgagcatatacagattcgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_67831444_67832603
seq2: B6Ng01-097K12.b_45_1160

seq1  GAATTCAACCAGTGAACTCATTGTTATAAATTCCTTGTCCCAAAGCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCAGTGAACTCATTGTTATAAATTCCTTGTCCCAAAGCAGTT  50

seq1  AATGATGGATATTTTTTCCTTTGTTGAAAGTGCTTCCATAGAACAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGGATATTTTTTCCTTTGTTGAAAGTGCTTCCATAGAACAGAGAT  100

seq1  TAAAAATACCAAAGTTATTTTCTTCTTTAACTCTTTTGATGTAGCTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATACCAAAGTTATTTTCTTCTTTAACTCTTTTGATGTAGCTGTCC  150

seq1  TCACAAAGTCAGTTTTTATAAGGCAAAAGAAAGTATGAGGTCAAAGGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGTCAGTTTTTATAAGGCAAAAGAAAGTATGAGGTCAAAGGTTC  200

seq1  TTAGCTTCACTGAAAATGTACTTTGTGCATTTGGCTGGCTTCCTTACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTCACTGAAAATGTACTTTGTGCATTTGGCTGGCTTCCTTACCTG  250

seq1  AAAAATGGGCTGGGACTTCTTTAATTTCTGTGAAACAGATGATGAAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGGCTGGGACTTCTTTAATTTCTGTGAAACAGATGATGAAATTG  300

seq1  TGGCAAAATGGCATGTTATAATTTCCTGAGTCATATCAGGAACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAATGGCATGTTATAATTTCCTGAGTCATATCAGGAACACACACA  350

seq1  CACATACGCACACCACCACCACCACCACCACCACCACCAACAACAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACGCACACCACCACCACCACCACCACCACCACCAACAACAACAAA  400

seq1  ATTCCACATTAAACACAGATGTTTGACTGCAGAGGCTAGAGCTCTGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACATTAAACACAGATGTTTGACTGCAGAGGCTAGAGCTCTGAAAT  450

seq1  ATTGAATGAGTTAATAGTTGGTCAAATGAGTATATTCAGTGGAAGTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGAGTTAATAGTTGGTCAAATGAGTATATTCAGTGGAAGTGTAT  500

seq1  TAGAAGAGAAACACACTGTTTCAACTCTACATCTTACAGTTTTACAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAGAAACACACTGTTTCAACTCTACATCTTACAGTTTTACAAAGA  550

seq1  TACAGATAAATTAGAATATTCTTAGCAAAAGGCAACTCAAATGTCAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAAATTAGAATATTCTTAGCAAAAGGCAACTCAAATGTCAGAGG  600

seq1  ACTCACAACTACTTCAGTTAAAGAAGGACCTTGATGACTAGCAACACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAACTACTTCAGTTAAAGAAGGACCTTGATGACTAGCAACACTCA  650

seq1  ACCTGGAGAAGAAAATTCTTACTACCTGGATGCCTTAAGATGTTTAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGAAGAAAATTCTTACTACCTGGATGCCTTAAGATGTTTAAAGA  700

seq1  GCTATACTGGAGGAAATGAGGCAGAGAATGGAGGGCCCTGCAAGAGATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACTGGAGGAAATGAGGCAGAGAATGGAGGGCCCTGCAAGAGATTG  750

seq1  TCTACAAGGTTCTTTGACAGGCTCTTTTTATGATATATCCCTCAGGACTC  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTACAAGGTTCTTTGACAGGCTCTTTTTATGATATATCCCTCA-GACTC  799

seq1  CTAAGAAGTGGAGCCATTGGGCATGACTTGTGAGATGAGCAGGAGATTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAGTGGAGCCATTGGGCATGACTTGTGAGATGAGCAGGAGATTGA  849

seq1  ATTTTCTCTTAGTGCAATCTGATGGTAGCTGTTGTAACTTAGATTTAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCTTAGTGCAATCTGATGGTAGCTGTTGTAACTTAGATTTAACT  899

seq1  CATCCACGGGGATCCTGGTTTAGATAAGAAAGAAAGAAAGAAAGAAAGAA  950
      |||||||||||||||||||||||||     |||||| ||||||| |||||
seq2  CATCCACGGGGATCCTGGTTTAGAT-----AGAAAG-AAGAAAG-AAGAA  942

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAG  1000
      |||||| ||||||||| | ||||   | || |||| |||| |        
seq2  AGAAAG-AAGAAAGAATGTAAGA---AGAGTAAGAGAGAATG--------  980

seq1  GAAGGAAGGAAGGAAGGAAGAAAACACTGAGCAGTTGTTGGAAGGAAATT  1050
        ||||    |||| |  ||| |||||||||||| |||| ||||   | |
seq2  --AGGA---GAGGAGGAGAGAGAACACTGAGCAG-TGTT-GAAG---AAT  1020

seq1  TGAATATGGAAGTGTGCACATGGAACTAAATGCCTTTCCCAGACCCAAGA  1100
      ||| ||||  |||||||| |||| ||| | ||| |    | ||||| |||
seq2  TGATTATG--AGTGTGCA-ATGG-ACTTATTGCTT----CTGACCC-AGA  1061

seq1  G-TCAATACATAAATGCTTCAT-GAGTACACCGCAAAATAATGTGCTAAG  1148
      | ||||||||| | ||| |||| |||||| ||||| |      ||||| |
seq2  GTTCAATACATTATTGC-TCATGGAGTAC-CCGCATA-----TTGCTAGG  1104

seq1  ATTTCTCAGGCA  1160
      ||||||||||||
seq2  ATTTCTCAGGCA  1116

seq1: chr2_67954704_67955834
seq2: B6Ng01-097K12.g_69_1189 (reverse)

seq1  GATCAGAATCCTGTATATGCTCAAAGCTATGGTTTTGGAACCTCCTTCCT  50
      |||| |||| |||||||||||| ||||||||  ||||| |||||| ||||
seq2  GATC-GAAT-CTGTATATGCTC-AAGCTATG--TTTGG-ACCTCC-TCCT  43

seq1  CCAGCTATGTCCCACCTTTCC-AGGGCCAAA-CTTTCAGTAAATGGGTGT  98
      | |||||||| |||||||||| ||||||||| |||||||||||||||| |
seq2  CAAGCTATGT-CCACCTTTCCAAGGGCCAAACCTTTCAGTAAATGGGT-T  91

seq1  CTTTGGAAGGTACTTTATTCCCAGCCATCAAAGAATAAGTCTATTTTCCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAGGTACTTTATTCCCAGCCATCAAAGAATAAGTCTATTTTCCA  141

seq1  AAGCCTTGAAGAAAGCAGAATTGCATGGTAAGAGCTGTGCCCACTGCCAA  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGCCTTGAAGAAAGCAG-ATTGCATGGTAAGAGCTGTGCCCACTGCCAA  190

seq1  ATCAGGAACAGGCAGCAAGTCTTCCTAAGAAAGCAAGGTATTAGAAAAAG  248
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATCAGGAACAGGCAGCAAGTCTTCCT-AGAAAGCAAGGTATTAGAAAAAG  239

seq1  TTTGTGGGCAGTTATCAACACAGTCTCAAATGGAGAATTGGAGAAAACTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGCAGTTATCAACACAGTCTCAAATGGAGAATTGGAGAAAACTA  289

seq1  AGAAATGTTAAAGGTCAAATTTTTTAAAGATTTAGATATGTATTTATTTT  348
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAAATGTTAAAGGTCAAA-TTTTTAAAGATTTAGATATGTATTTATTTT  338

seq1  ATGTATGTGAGTACACTGTAGCTTTACAGATGGTTGTGAGCCTTCATGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGAGTACACTGTAGCTTTACAGATGGTTGTGAGCCTTCATGTG  388

seq1  CTTGTTGGAAATTGAATTTTTAGGGACTCTGCTTGCCCTGGTCAACCCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGGAAATTGAATTTTTAGGGACTCTGCTTGCCCTGGTCAACCCCA  438

seq1  CTCACTCTGCTCAGGCCCACTCTGGCCCAAAGATTTATTTATTATTATAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTGCTCAGGCCCACTCTGGCCCAAAGATTTATTTATTATTATAC  488

seq1  ATAAGTACACTGTAGCTGTCTTCAGACGTGTCAGTAGAGGGTGTCAGATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTACACTGTAGCTGTCTTCAGACGTGTCAGTAGAGGGTGTCAGATC  538

seq1  TCACTATTAGTGATTGTGAGCTACCATGTGGTTGCTGGGAATTGAACTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTAGTGATTGTGAGCTACCATGTGGTTGCTGGGAATTGAACTCA  588

seq1  GGACCTTCAAAAGAGCAGTTGGTGCTCTTACCCGCTGAGCCATCTCACCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTCAAAAGAGCAGTTGGTGCTCTTACCCGCTGAGCCATCTCACCA  638

seq1  GCCCAAAGGTTAATTTTTTTAATCAAACAATTAAAAGCTCAAAGTCAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAGGTTAATTTTTTTAATCAAACAATTAAAAGCTCAAAGTCAGAA  688

seq1  AAATGAAAGCAATCTGAATTGTATGTGAGCTTGTCTGAAAGATTTAAGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAAGCAATCTGAATTGTATGTGAGCTTGTCTGAAAGATTTAAGAG  738

seq1  CAAAAATTGTGCCTAACTGCAAAAAAAAATAGCCTTTTGTAAAGAAGCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATTGTGCCTAACTGCAAAAAAAAATAGCCTTTTGTAAAGAAGCAG  788

seq1  ACCCTTTGTGGAAAATTACTGATGTTAGCTTTACTCCAGTCACCAGTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTGTGGAAAATTACTGATGTTAGCTTTACTCCAGTCACCAGTGCT  838

seq1  CGTGGTCAATGTATTCATGTATTGAATATCAATACACATAAACAATTTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTCAATGTATTCATGTATTGAATATCAATACACATAAACAATTTCT  888

seq1  GTTCATGGGAGAGGAGAAGCTAGGAGGTTATTTCCGGGGCTTCTGAAGAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGGGAGAGGAGAAGCTAGGAGGTTATTTCCGGGGCTTCTGAAGAT  938

seq1  GAATGACCGTGCTTACTTTAGTCATTGCTGGCAATTCTTACACCCTTACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACCGTGCTTACTTTAGTCATTGCTGGCAATTCTTACACCCTTACT  988

seq1  GTGTTTATTCAAGAATATGAAAATGGCTAGGTAAACATGAATAAAACTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATTCAAGAATATGAAAATGGCTAGGTAAACATGAATAAAACTGT  1038

seq1  ACTTTATTGATTTTGCAGAGTTCTGGGGAAGATTTCTGAGGCATGGAGCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTGATTTTGCAGAGTTCTGGGGAAGATTTCTGAGGCATGGAGCT  1088

seq1  TCCAGCAGGTTTGGAAGAAAGTAAAGTGAATTC  1131
      |||||||||||||||||||||||||||||||||
seq2  TCCAGCAGGTTTGGAAGAAAGTAAAGTGAATTC  1121