BAC Information

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BAC

Clone NameB6Ng01-098E16
Chromosome2 (Build37)
Map Location 58,290,826 - 58,481,449
singlet/doubletdoublet
Overlap geneAcvr1
Upstream geneGalnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062
Downstream geneLOC674940, Upp2, BC062650, Pkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016, Tanc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098E16.bB6Ng01-098E16.g
ACCDH908424DH908425
length878615
definitionDH908424|Mus musculus domesticus DNA, BAC clone: B6Ng01-098E16, 5' end.DH908425|Mus musculus domesticus DNA, BAC clone: B6Ng01-098E16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,290,826 - 58,291,561)(58,480,836 - 58,481,449)
sequence
gaattcttacccagtgatgaggaaaacccaggtctagactgggcctgttc
cagcactacctaacactatgaagatcaaaacccacaagaaataaactatt
tccaagtgactattcggtaacaacatttaaagatatttacagaaacacca
aaatatctgatatccagtaatacaaattttataatgtctagaatctaaaa
aacaaacaaacaaacaaacaaacaggtttatagggaatccagaaactata
acctacaattagaagaagaaaaattaacctaagtgaacctgtgactgaca
tagatgtaaagattggcagacaaggacattaaagcaattatccttaccgt
atcttaactatattcaatattggcaaccatggaattaaagaaataatgat
attttttaatgcttatgatgagcttacagagattaaaaatttcaacataa
gagatgaaaaatggtttgaggagaatgaatgatgcatagagcattgtagg
aaagactgatgaatttgaagaccccagaatagaaaccacccaaaataaaa
cgtgaaagaaaagaaatgcggtatccaccgatgatctgtgggacttcagc
agcctaagtaatgcatgaacaactggagtgtccagaggaaagaaatagtc
actgaaaagactcatcacacacagcacaagaaaggtaagaggacagcaat
tccttcatgggggaaaaaacacaaacaagaaaataacacaaggagttctt
aactgtacttgaagttggtaactcagaagtctaagctcaaagaagcaaga
ctttcccagattgctaagctagaaattattattccatatatcacacttaa
acaattgttggaaggcaaaggggaaggg
gaattctagaaaagcaatagtattatgtttggttttgctttattttgttt
ctaaggttgaactgcaggcacagaactgaatcgattcaatcagtcattct
tttctgttactggcatgatataatcatctgtctagacgtgacccccccac
ccatttttttttatctttatccattattcccagcatagctgctgtgtcct
tctggcctattttcccatagacgtacagatccataaaaatatgtagtata
gggtctgctttgaaagcgtgagtgaatggatcatactgcatttctcacta
tacaatgtgcctttcatcagacacatcttctgaggtccatccataatgat
ctatggagattcagagtcttcagtttaaactactctcctgcactcggaat
gccagttactatactcacgtgcatattgtcttctggtggacatctacact
acttctagttttctcttattgaaaaagcacttccggcgaatgattggatg
cagactctcagtgcactgttcaagggtctctcggaaatttacctgggatt
cttgagtctttgacaatacatattttcaattttaataaaactctgccaaa
ttgctcttcagtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_58290826_58291561
seq2: B6Ng01-098E16.b_189_919

seq1  CCAAAATATCTGATATCCAGTAATACAAATTTTATAATGTCTAGAATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATATCTGATATCCAGTAATACAAATTTTATAATGTCTAGAATCTA  50

seq1  AAAAACAAACAAACAAACAAACAAACAGGTTTATAGGGAATCCAGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAACAAACAAACAAACAGGTTTATAGGGAATCCAGAAACT  100

seq1  ATAACCTACAATTAGAAGAAGAAAAATTAACCTAAGTGAACCTGTGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTACAATTAGAAGAAGAAAAATTAACCTAAGTGAACCTGTGACTG  150

seq1  ACATAGATGTAAAGATTGGCAGACAAGGACATTAAAGCAATTATCCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGATGTAAAGATTGGCAGACAAGGACATTAAAGCAATTATCCTTAC  200

seq1  CGTATCTTAACTATATTCAATATTGGCAACCATGGAATTAAAGAAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTTAACTATATTCAATATTGGCAACCATGGAATTAAAGAAATAAT  250

seq1  GATATTTTTTAATGCTTATGATGAGCTTACAGAGATTAAAAATTTCAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTTTAATGCTTATGATGAGCTTACAGAGATTAAAAATTTCAACA  300

seq1  TAAGAGATGAAAAATGGTTTGAGGAGAATGAATGATGCATAGAGCATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATGAAAAATGGTTTGAGGAGAATGAATGATGCATAGAGCATTGT  350

seq1  AGGAAAGACTGATGAATTTGAAGACCCCAGAATAGAAACCACCCAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGACTGATGAATTTGAAGACCCCAGAATAGAAACCACCCAAAATA  400

seq1  AAACGTGAAAGAAAAGAAATGCGGTATCCACCGATGATCTGTGGGACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGAAAGAAAAGAAATGCGGTATCCACCGATGATCTGTGGGACTTC  450

seq1  AGCAGCCTAAGTAATGCATGAACAACTGGAGTGTCCAGAGGAAAGAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTAAGTAATGCATGAACAACTGGAGTGTCCAGAGGAAAGAAATA  500

seq1  GTCACTGAAAAGACTCATCACACACAGCACAAGAAAGGTAAGAGGACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGAAAAGACTCATCACACACAGCACAAGAAAGGTAAGAGGACAGC  550

seq1  AA-TCCTTCATGGGGGAAAAAACACAAACAAGAAAATAACACAAGGAGTT  599
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTTCATGGGGGAAAAAACACAAACAAGAAAATAACACAAGGAGTT  600

seq1  CTTAACTGTACTTGAAGTTGGTAACTCAGAAGTCTAAGCTCAAAGAAGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTAACTGTACTTGAAGTTGGTAACTCAGAAGTCTAAGCTCAAAGAAGC-  649

seq1  AAGACTTTCCCAGATTTGCAAAAGCTAAGAAATTAATTATCCCAAATATC  699
      |||||||||||||| ||||  ||||| ||||||| ||||| ||| |||| 
seq2  AAGACTTTCCCAGA-TTGC-TAAGCT-AGAAATT-ATTATTCCATATAT-  694

seq1  CACACTAAAACAAATG-TGGAAGGCAAAACGGGAAGGG  736
      |||||| |||||| || |||||||| ||| ||||||||
seq2  CACACTTAAACAATTGTTGGAAGGC-AAAGGGGAAGGG  731

seq1: chr2_58480836_58481449
seq2: B6Ng01-098E16.g_70_684 (reverse)

seq1  TGCACTGAAGAGCAATTTGGCAGAG-TTTATTAAAATTGAAAATATGTAT  49
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCACTGAAGAGCAATTTGGCAGAGTTTTATTAAAATTGAAAATATGTAT  50

seq1  TGTCAAAGACTCAAGAATCCCAGGTAAATTTCCGAGAGACCCTTGAACAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAGACTCAAGAATCCCAGGTAAATTTCCGAGAGACCCTTGAACAG  100

seq1  TGCACTGAGAGTCTGCATCCAATCATTCGCCGGAAGTGCTTTTTCAATAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGAGAGTCTGCATCCAATCATTCGCCGGAAGTGCTTTTTCAATAA  150

seq1  GAGAAAACTAGAAGTAGTGTAGATGTCCACCAGAAGACAATATGCACGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACTAGAAGTAGTGTAGATGTCCACCAGAAGACAATATGCACGTG  200

seq1  AGTATAGTAACTGGCATTCCGAGTGCAGGAGAGTAGTTTAAACTGAAGAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGTAACTGGCATTCCGAGTGCAGGAGAGTAGTTTAAACTGAAGAC  250

seq1  TCTGAATCTCCATAGATCATTATGGATGGACCTCAGAAGATGTGTCTGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATCTCCATAGATCATTATGGATGGACCTCAGAAGATGTGTCTGAT  300

seq1  GAAAGGCACATTGTATAGTGAGAAATGCAGTATGATCCATTCACTCACGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCACATTGTATAGTGAGAAATGCAGTATGATCCATTCACTCACGC  350

seq1  TTTCAAAGCAGACCCTATACTACATATTTTTATGGATCTGTACGTCTATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGCAGACCCTATACTACATATTTTTATGGATCTGTACGTCTATG  400

seq1  GGAAAATAGGCCAGAAGGACACAGCAGCTATGCTGGGAATAATGGATAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAGGCCAGAAGGACACAGCAGCTATGCTGGGAATAATGGATAAA  450

seq1  GATAAAAAAAAATGGGTGGGGGGGTCACGTCTAGACAGATGATTATATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAAAAATGGGTGGGGGGGTCACGTCTAGACAGATGATTATATCA  500

seq1  TGCCAGTAACAGAAAAGAATGACTGATTGAATCGATTCAGTTCTGTGCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTAACAGAAAAGAATGACTGATTGAATCGATTCAGTTCTGTGCCT  550

seq1  GCAGTTCAACCTTAGAAACAAAATAAAGCAAAACCAAACATAATACTATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCAACCTTAGAAACAAAATAAAGCAAAACCAAACATAATACTATT  600

seq1  GCTTTTCTAGAATTC  614
      |||||||||||||||
seq2  GCTTTTCTAGAATTC  615