BAC Information

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BAC

Clone NameB6Ng01-098L20
Chromosome2 (Build37)
Map Location 112,429,346 - 112,430,460
singlet/doubletsinglet
Overlap geneAven
Upstream geneLOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5
Downstream geneRyr3, 4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098L20.bB6Ng01-098L20.g
ACCDH908743DH908744
length1,110487
definitionDH908743|Mus musculus domesticus DNA, BAC clone: B6Ng01-098L20, 5' end.DH908744|Mus musculus domesticus DNA, BAC clone: B6Ng01-098L20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttttagtcaaaagcacataatttagaagaaaacatcttcttg
caaaatggtactataacttaagtcttggaaggtgtaacatccttcattaa
ctttcacaacattgtcttttactttgacaaattatagcactgttcagctt
atattgtctgacttatttaatagacaagatttagaaaaggttttgctagg
tttgtattagcagtttgaatttataagtaggagtaaatggacttacattt
ttactttttaaaattcttttttgttttttaaagatttatttatttatttt
atgtatgtgagtacactgtagctatacagatagttgtgagccttcacgtg
gttgttgggaattgaattttttaggacctctgctggctctggtcaactca
gcttgctcagtccctgcttgctctggcccaaagatttatttattattaaa
cataagtacactgtagctgacttcagatacaccagaagagggcgtcagat
ctcattacgggtggttgttagctaccatgtagttgctaggatttgaactc
tggaccttcagaagagcagacagtgctcttacccactgagcaacctcacc
agcccagccttatatttttaaatgttagtctgtgtgtgtgtttgtgcaca
agagcacatgagggtacatatatgtgtgcacatcatgcatgtgaataaag
gaggctagaggaagatcttggatgtcaattcctcaggtctgtccaccttt
ctcactttgatgacagggtctctcactagcctggagccacactaagtagg
ctcggctggctgacccaccaagttccaggcatccaccttatctcttgcct
cccccagtacagggtttacaagtgtgcactactatgcccagcttcattat
ataaggtgctggggataaattcattacttctgtttgcaagacttatactg
cactatttcttaagccctggtatttaccactttagcattttcttctcatg
gcatccctgctggttaaaaatgtgtataaaactaacatgttttcaaagtt
caacttattattgaactgtctactaaaatagctgcccaccttggtacatc
ctcctttcct
tgagtcccctaatctgaagattaaactttcacaactaccattagttatgg
tattaattgttaatgtttgtaagtatattctagtataattttgtactgat
tattttaagtttcatatataaagatatacagaggacctaacacattatag
aaatataaatttcttcatctataaatttggtaatttttttgagaattttg
catgtattattttacactctttctacctctctctttcttagctctaattc
ctcctgtgcccctccctccctctcagattcatggccttattattattatt
attattattattttcttatacatacatacatatgtatatatgactataac
ttcctgagtccatttagtgtttcttgtatataatatgtttagggctgact
acttgggactggagattatattgggggggcttgtccctagaggaaactga
ctctctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112429346_112430460
seq2: B6Ng01-098L20.b_49_1158

seq1  GAATTCCTTTTTAGTCAAAAGCACATAATTTAGAAGAAAACATCTTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTTAGTCAAAAGCACATAATTTAGAAGAAAACATCTTCTTG  50

seq1  CAAAATGGTACTATAACTTAAGTCTTGGAAGGTGTAACATCCTTCATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGTACTATAACTTAAGTCTTGGAAGGTGTAACATCCTTCATTAA  100

seq1  CTTTCACAACATTGTCTTTTACTTTGACAAATTATAGCACTGTTCAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACAACATTGTCTTTTACTTTGACAAATTATAGCACTGTTCAGCTT  150

seq1  ATATTGTCTGACTTATTTAATAGACAAGATTTAGAAAAGGTTTTGCTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTCTGACTTATTTAATAGACAAGATTTAGAAAAGGTTTTGCTAGG  200

seq1  TTTGTATTAGCAGTTTGAATTTATAAGTAGGAGTAAATGGACTTACATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTAGCAGTTTGAATTTATAAGTAGGAGTAAATGGACTTACATTT  250

seq1  TTACTTTTTAAAATTCTTTTTTGTTTTTTAAAGATTTATTTATTTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTTAAAATTCTTTTTTGTTTTTTAAAGATTTATTTATTTATTTT  300

seq1  ATGTATGTGAGTACACTGTAGCTATACAGATAGTTGTGAGCCTTCACGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTGAGTACACTGTAGCTATACAGATAGTTGTGAGCCTTCACGTG  350

seq1  GTTGTTGGGAATTGAATTTTTTAGGACCTCTGCTGGCTCTGGTCAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGGGAATTGAATTTTTTAGGACCTCTGCTGGCTCTGGTCAACTCA  400

seq1  GCTTGCTCAGTCCCTGCTTGCTCTGGCCCAAAGATTTATTTATTATTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCAGTCCCTGCTTGCTCTGGCCCAAAGATTTATTTATTATTAAA  450

seq1  CATAAGTACACTGTAGCTGACTTCAGATACACCAGAAGAGGGCGTCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTACACTGTAGCTGACTTCAGATACACCAGAAGAGGGCGTCAGAT  500

seq1  CTCATTACGGGTGGTTGTTAGCTACCATGTAGTTGCTAGGATTTGAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTACGGGTGGTTGTTAGCTACCATGTAGTTGCTAGGATTTGAACTC  550

seq1  TGGACCTTCAGAAGAGCAGACAGTGCTCTTACCCACTGAGCAACCTCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTTCAGAAGAGCAGACAGTGCTCTTACCCACTGAGCAACCTCACC  600

seq1  AGCCCAGCCTTATATTTTTAAATGTTAGTCTGTGTGTGTGTTTGTGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCCTTATATTTTTAAATGTTAGTCTGTGTGTGTGTTTGTGCACA  650

seq1  AGAGCACATGAGGGTACATATATGTGTGCACATCATGCATGTGAATAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACATGAGGGTACATATATGTGTGCACATCATGCATGTGAATAAAG  700

seq1  GAGGCTAGAGGAAGATCTTGGATGTCAATTCCTCAGGTCTGTCCACCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAGAGGAAGATCTTGGATGTCAATTCCTCAGGTCTGTCCACCTTT  750

seq1  CTCACTTTGATGACAGGGTCTCTCACTAGCCTGGAGCCACACTAAGTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTGATGACAGGGTCTCTCACTAGCCTGGAGCCACACTAAGTAGG  800

seq1  CTCGGCTGGCTGA-CCACCAAGTTCCAGGCATCCACC-TATCTC-TGCCT  847
      ||||||||||||| ||||||||||||||||||||||| |||||| |||||
seq2  CTCGGCTGGCTGACCCACCAAGTTCCAGGCATCCACCTTATCTCTTGCCT  850

seq1  -CCCCAGTACAGGGATTACAAGTGTGCACTACTATGCCCAGCTTCATTAT  896
       ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCCCCAGTACAGGGTTTACAAGTGTGCACTACTATGCCCAGCTTCATTAT  900

seq1  AT-AGGTGCTGGGGATCAAATTCATTACTTCATGTTTGCAAGTACTTTAA  945
      || ||||||||||||| |||||||||||||| |||||||||| ||||  |
seq2  ATAAGGTGCTGGGGAT-AAATTCATTACTTC-TGTTTGCAAG-ACTT--A  945

seq1  TAACTGCACTATTTCTTAAGCCCTGGTATTTACCAACTTTAGGCATTTTC  995
      | |||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  T-ACTGCACTATTTCTTAAGCCCTGGTATTTACC-ACTTTA-GCATTTTC  992

seq1  TTCTCAATGCATCCTTGCTGGTTTAATAATGTGTATTAAAACTAACATGT  1045
      ||||||  |||||| |||||| |||| |||||||| ||||||||||||||
seq2  TTCTCATGGCATCCCTGCTGG-TTAAAAATGTGTA-TAAAACTAACATGT  1040

seq1  TTTCAAAAGTCAAACTA-TATAGGACATGCCCAC-AAAATAGCTGCCCCA  1093
      |||||||  ||||  || ||| | || || | || |||||||||| ||||
seq2  TTTCAAAGTTCAACTTATTATTGAAC-TGTCTACTAAAATAGCTG-CCCA  1088

seq1  TCTTGGTCTACCCTCCTTTCCT  1115
       ||||||  | |||||||||||
seq2  CCTTGGTACATCCTCCTTTCCT  1110