BAC Information

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BAC

Clone NameB6Ng01-098O04
Chromosome2 (Build37)
Map Location 156,758,540 - 156,912,539
singlet/doubletdoublet
Overlap geneNdrg3, LOC668943, Dsn1, 9830001H06Rik
Upstream geneGdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880
Downstream geneGm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat, Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098O04.bB6Ng01-098O04.g
ACCDH908837DH908838
length7721,053
definitionDH908837|Mus musculus domesticus DNA, BAC clone: B6Ng01-098O04, 5' end.DH908838|Mus musculus domesticus DNA, BAC clone: B6Ng01-098O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(156,911,770 - 156,912,539)(156,758,540 - 156,759,592)
sequence
gtgaattctggccacttcagtgccttttccagaagtctggcctgggaaca
ttgattctcttgtaggatacctaaggtccatactagggactcaggactgc
tggttccataaatgaccaagattaagtccatttgccatttgtaccccaag
cctcaatttcccattgtgtaacttttagaaaatatatcataagctaggca
tagtggtgcacacatttaatgccagtacttgggagacagaggcaggtgga
tctctgcaacaaagccagcctggtcttcaggtcagtcagggctacacctt
gagaccctatctcaaaaaaaaaaaaaagaatattgtgtatatattgtgtg
tatatattgtgtgtatatattgtgtgcatatgtatttgtgggcatgggtc
aaggctctccttccacctttatgtgggttctaagagttgaactcagatca
tcgggcttgtatgctaagtacttttccctattgagccatctcactgcccc
tctatctaacatttaacacataggaccaaaaatctcagactgcttcccag
gaccaacagcctacagttcagctccctgtcaaagccaacgagtgtgctat
agcaaaaacctgaaggggcatgctcagaccaaaagaactgaccctttgaa
gatgtaatttttgcctaaggatgtatgcacagttcattaggaggtgcttg
ccctagcagtgtgggagccctggatgcgacctctggtataaagagaaaga
aggaaggggagggaaaggggaa
gaattccaggcaagttgtgaaccacataggggagctactgtgtcttaaaa
agaagaagaaaagaagacgtagaaaaggaagaggaagatgaggaggaaga
gaaggggccataagactctgccctgcctagggaagctaaaggcagtggag
ggctggtgagaggacgtcatcaccttcagtggacagctccacaccatgcc
catgggaatggtctccttcaagggtagtgtgcactcttaaccaatgagcc
ttttctccagcccccattagttcttattacattttaaagttgcatttatt
taatttgtgtgtgtttatgcacgtcatgcttggtggtgtgtgtgtgcctg
catgtgtatgtgcgcgtgcttgtgtgtggacaaagatgataactggtggg
agtcaattctcttcgccgtcaactcaggctgtcagggctgtgaggtatgg
cagtgagcacctttacttgctgagccatctaggtggtccagtgttttgtg
aaactgggtcttatgtagcctgaactttccatccagctgagaatggactt
cgactcctgattttttttttttttacctcccaagcagtttgtttgtttgt
ttgtttgtttggtttttggtattatcaaatttgtaaaaatcaaatttgaa
gccataaatttcttatccatattttagagaagcccgtgggtcccctgcag
tccagagcactgtgagtttaggcagcctcagagcaccaggcctatgtgta
ttctgagagctacctgttgctcaacagggcttccctttgacacacacttg
agagagagagaaagggaagaagttggaagtcctgtgggatgatggagtcc
aagcagtggcagcaggccagcagccagtccacaaacacatgacagagctc
tgtttggaaaaataaaacttctgttctgggggacacttatatattcttga
ataatctagaaatgttgaaaaatataagtgcctaagagaagaaaaaaact
tgtatcctttatccactagatgtgcttaagatgtttccttaaaatacaac
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_156911770_156912539
seq2: B6Ng01-098O04.b_61_832 (reverse)

seq1  TTCCCCTTTCCCTCCCCTTCCTTCTTTCTCTTTATACCAGAGGTCGCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTTCCCTCCCCTTCCTTCTTTCTCTTTATACCAGAGGTCGCATC  50

seq1  CAGGGCT-CCACACTTGCTA-GGCAAGCACCTCCTAATGAACTGTGCATA  98
      ||||||| |||||| ||||| |||||||||||||||||||||||||||||
seq2  CAGGGCTCCCACAC-TGCTAGGGCAAGCACCTCCTAATGAACTGTGCATA  99

seq1  CATCCTTAGGC-AAAATTACATCTTCAAAGGGTCAGTTCTTTTGGTCTGA  147
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTAGGCAAAAATTACATCTTCAAAGGGTCAGTTCTTTTGGTCTGA  149

seq1  GCATGCCCCTTCAGGTTTTTGCTATAGCACACTCGTTGGCTTTGACAGGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCCCTTCAGGTTTTTGCTATAGCACACTCGTTGGCTTTGACAGGG  199

seq1  AGCTGAACTGTAGGCTGTTGGTCCTGGGAAGCAGTCTGAGATTTTTGGTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAACTGTAGGCTGTTGGTCCTGGGAAGCAGTCTGAGATTTTTGGTC  249

seq1  CTATGTGTTAAATGTTAGATAGAGGGGCAGTGAGATGGCTCAATAGGGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGTTAAATGTTAGATAGAGGGGCAGTGAGATGGCTCAATAGGGAA  299

seq1  AAGTACTTAGCATACAAGCCCGATGATCTGAGTTCAACTCTTAGAACCCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTAGCATACAAGCCCGATGATCTGAGTTCAACTCTTAGAACCCA  349

seq1  CATAAAGGTGGAAGGAGAGCCTTGACCCATGCCCACAAATACATATGCAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGTGGAAGGAGAGCCTTGACCCATGCCCACAAATACATATGCAC  399

seq1  ACAATATATACACACAATATATACACACAATATATACACAATATTCTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATATACACACAATATATACACACAATATATACACAATATTCTTTT  449

seq1  TTTTTTTTTTGAGATAGGGTCTCAAGGTGTAGCCCTGACTGACCTGAAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGAGATAGGGTCTCAAGGTGTAGCCCTGACTGACCTGAAGA  499

seq1  CCAGGCTGGCTTTGTTGCAGAGATCCACCTGCCTCTGTCTCCCAAGTACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCTTTGTTGCAGAGATCCACCTGCCTCTGTCTCCCAAGTACT  549

seq1  GGCATTAAATGTGTGCACCACTATGCCTAGCTTATGATATATTTTCTAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTAAATGTGTGCACCACTATGCCTAGCTTATGATATATTTTCTAAA  599

seq1  AGTTACACAATGGGAAATTGAGGCTTGGGGTACAAATGGCAAATGGACTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACACAATGGGAAATTGAGGCTTGGGGTACAAATGGCAAATGGACTT  649

seq1  AATCTTGGTCATTTATGGAACCAGCAGTCCTGAGTCCCTAGTATGGACCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGGTCATTTATGGAACCAGCAGTCCTGAGTCCCTAGTATGGACCT  699

seq1  TAGGTATCCTACAAGAGAATCAATGTTCCCAGGCCAGACTTCTGGAAAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATCCTACAAGAGAATCAATGTTCCCAGGCCAGACTTCTGGAAAAG  749

seq1  GCACTGAAGTGGCCAGAATTCAC  770
      |||||||||||||||||||||||
seq2  GCACTGAAGTGGCCAGAATTCAC  772

seq1: chr2_156758540_156759592
seq2: B6Ng01-098O04.g_68_1120

seq1  GAATTCCAGGCAAGTTGTGAACCACATAGGGGAGCTACTGTGTCTTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCAAGTTGTGAACCACATAGGGGAGCTACTGTGTCTTAAAA  50

seq1  AGAAGAAGAAAAGAAGACGTAGAAAAGGAAGAGGAAGATGAGGAGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAAAGAAGACGTAGAAAAGGAAGAGGAAGATGAGGAGGAAGA  100

seq1  GAAGGGGCCATAAGACTCTGCCCTGCCTAGGGAAGCTAAAGGCAGTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGCCATAAGACTCTGCCCTGCCTAGGGAAGCTAAAGGCAGTGGAG  150

seq1  GGCTGGTGAGAGGACGTCATCACCTTCAGTGGACAGCTCCACACCATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGAGAGGACGTCATCACCTTCAGTGGACAGCTCCACACCATGCC  200

seq1  CATGGGAATGGTCTCCTTCAAGGGTAGTGTGCACTCTTAACCAATGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAATGGTCTCCTTCAAGGGTAGTGTGCACTCTTAACCAATGAGCC  250

seq1  TTTTCTCCAGCCCCCATTAGTTCTTATTACATTTTAAAGTTGCATTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCAGCCCCCATTAGTTCTTATTACATTTTAAAGTTGCATTTATT  300

seq1  TAATTTGTGTGTGTTTATGCACGTCATGCTTGGTGGTGTGTGTGTGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTGTGTGTTTATGCACGTCATGCTTGGTGGTGTGTGTGTGCCTG  350

seq1  CATGTGTATGTGCGCGTGCTTGTGTGTGGACAAAGATGATAACTGGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTATGTGCGCGTGCTTGTGTGTGGACAAAGATGATAACTGGTGGG  400

seq1  AGTCAATTCTCTTCGCCGTCAACTCAGGCTGTCAGGGCTGTGAGGTATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATTCTCTTCGCCGTCAACTCAGGCTGTCAGGGCTGTGAGGTATGG  450

seq1  CAGTGAGCACCTTTACTTGCTGAGCCATCTAGGTGGTCCAGTGTTTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCACCTTTACTTGCTGAGCCATCTAGGTGGTCCAGTGTTTTGTG  500

seq1  AAACTGGGTCTTATGTAGCCTGAACTTTCCATCCAGCTGAGAATGGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGTCTTATGTAGCCTGAACTTTCCATCCAGCTGAGAATGGACTT  550

seq1  CGACTCCTGA-TTTTTTTTTTTTTACCTCCCAAGCAGTTTGTTTGTTTGT  599
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CGACTCCTGATTTTTTTTTTTTTTACCTCCCAAGCAGTTTGTTTGTTTGT  600

seq1  TTGTTTGTTTGGTTTTTGGTATTATCAAATTTGTAAAAATCAAATTTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGGTTTTTGGTATTATCAAATTTGTAAAAATCAAATTTGAA  650

seq1  GCCATAAATTTCTTATCCATATTTTAGAGAAGCCCGTGGGTCCCCTGCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAAATTTCTTATCCATATTTTAGAGAAGCCCGTGGGTCCCCTGCAG  700

seq1  TCCAGAGCACTGTGAG-TTAGGCAGCCTCAGAGCACCAGGCCTATGTGTA  748
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCCAGAGCACTGTGAGTTTAGGCAGCCTCAGAGCACCAGGCCTATGTGTA  750

seq1  TTCTGAGAGCTACCTGTTGCTCAACAGGGCTTCCCTTTGACACACACTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGAGCTACCTGTTGCTCAACAGGGCTTCCCTTTGACACACACTTG  800

seq1  AGAGAGAGAGAAAGGGAAGAAGTTGGAAGTCCTGT-GGATGATGGAGTCC  847
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGAGAGAGAGAAAGGGAAGAAGTTGGAAGTCCTGTGGGATGATGGAGTCC  850

seq1  AAGCAGTGGCAGCAGGCCAGCAGGCCAGGTCCACAAACACATGACCAGAG  897
      |||||||||||||||||||||| |||| |||||||||||||||| |||||
seq2  AAGCAGTGGCAGCAGGCCAGCA-GCCA-GTCCACAAACACATGA-CAGAG  897

seq1  CTCTGTTTGG-AAAATAAAACTTCTG-TCTGGGGGACACTTATAATATTC  945
      |||||||||| ||||||||||||||| |||||||||||||||| ||||||
seq2  CTCTGTTTGGAAAAATAAAACTTCTGTTCTGGGGGACACTTAT-ATATTC  946

seq1  TTG-ATAATCTAGAAATGTATGACAAATATAAGTGGCCTAAGAGAAAAAA  994
      ||| ||||||||||||||| ||| |||||||||| ||||||||||| |||
seq2  TTGAATAATCTAGAAATGT-TGAAAAATATAAGT-GCCTAAGAGAAGAAA  994

seq1  AAAACCTGTATCCTTTAT-CACTAAGATGTGCTT-AGATGTTTCCTTAAA  1042
      ||||| |||||||||||| |||| |||||||||| |||||||||||| ||
seq2  AAAACTTGTATCCTTTATCCACT-AGATGTGCTTAAGATGTTTCCTT-AA  1042

seq1  AATACAACAGG  1053
      |||||||||||
seq2  AATACAACAGG  1053