BAC Information

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BAC

Clone NameB6Ng01-098P01
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,527 - 142,777,070118,242,221 - 118,242,557
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098P01.bB6Ng01-098P01.g
ACCDH908875DH908876
length713337
definitionDH908875|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P01, 5' end.DH908876|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,527 - 142,777,070)(118,242,221 - 118,242,557)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatttgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctatactattaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatgggtgattccaccagatgttctt
ttatccttgaaaagagtttttgctatcctcggttttttgttatttctgat
gaatttgcaaatt
cttaattctgtcaggtcctttgccacagcaataagaaaggaaacacaggc
agacggcagacatgcgagcctgtgaggtaggttcctaactttcatccctg
ttagcgcaaacgccactgtgttaggtcaactcagttccaaatgaagctta
gagcaaatcccgcatgaattagggcatcaggctggactgcaaagctccct
ggaggagcatgggctaagtcatgggcaagtagacgcagcgatgatctgag
gatgaggggccacgggaaagaagagaaccctgagcgtggctgggtaggac
aaggagctgatttagaagtggggtgtgtgggaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776527_142777070
seq2: B6Ng01-098P01.b_215_759 (reverse)

seq1  AATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTC  50
      |||||||||||||||| | |||||||||||||| ||||||||||||| ||
seq2  AATTTGCAAATTCATCAGAAATAACAAAAAACCGAGGATAGCAAAAACTC  50

seq1  TTCTCAAGGATAAAAGAACCTCTGGTGGAATCA-CCATGCCTGACCTAAA  99
      || |||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  TTTTCAAGGATAAAAGAACATCTGGTGGAATCACCCATGCCTGACCTAAA  100

seq1  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAG  149
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTAATAGTATAGAG  150

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  199
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAGTGGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  200

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAG  249
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTG  250

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  300

seq1  CATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  349
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  CATGTAGAAGAATGCAAATCGATCCATACTTATCTCCTTGTACTAAGGTC  350

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  400

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACA  449
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  450

seq1  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  500

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  544
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  545

seq1: chr10_118242221_118242557
seq2: B6Ng01-098P01.g_73_409 (reverse)

seq1  CCCCCTCCCACACACCCCACTTCTAAATCAGCTCCTTGTCCTACCCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCACACACCCCACTTCTAAATCAGCTCCTTGTCCTACCCAGCC  50

seq1  ACGCTCAGGGTTCTCTTCTTTCCCGTGGCCCCTCATCCTCAGATCATCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCAGGGTTCTCTTCTTTCCCGTGGCCCCTCATCCTCAGATCATCGC  100

seq1  TGCGTCTACTTGCCCATGACTTAGCCCATGCTCCTCCAGGGAGCTTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTCTACTTGCCCATGACTTAGCCCATGCTCCTCCAGGGAGCTTTGCA  150

seq1  GTCCAGCCTGATGCCCTAATTCATGCGGGATTTGCTCTAAGCTTCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCCTGATGCCCTAATTCATGCGGGATTTGCTCTAAGCTTCATTTG  200

seq1  GAACTGAGTTGACCTAACACAGTGGCGTTTGCGCTAACAGGGATGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAGTTGACCTAACACAGTGGCGTTTGCGCTAACAGGGATGAAAGT  250

seq1  TAGGAACCTACCTCACAGGCTCGCATGTCTGCCGTCTGCCTGTGTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACCTACCTCACAGGCTCGCATGTCTGCCGTCTGCCTGTGTTTCCT  300

seq1  TTCTTATTGCTGTGGCAAAGGACCTGACAGAATTAAG  337
      |||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTGCTGTGGCAAAGGACCTGACAGAATTAAG  337