BAC Information

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BAC

Clone NameB6Ng01-099A10
Chromosome2 (Build37)
Map Location 141,260,703 - 141,261,736
singlet/doubletsinglet
Overlap genenone
Upstream geneFlrt3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099A10.bB6Ng01-099A10.g
ACCDH908937DH908938
length1,1581,031
definitionDH908937|Mus musculus domesticus DNA, BAC clone: B6Ng01-099A10, 5' end.DH908938|Mus musculus domesticus DNA, BAC clone: B6Ng01-099A10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgttccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
tcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtagtactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcagtgataagtggatattagcccaaaacc
taggatacttaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgtcggggtctaggaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaaggaatctgcaaccct
atagtggacacattatgactacagtacccggagctctgactctagctgct
atgtatcaagatggctagtcggcatcactgagaaaggccatgaccgcaac
ttatatgcccagttacaggacgcaggcaaaagaggattggtctggctagc
gggaatgc
gaattccatctgctcatccatgcttagaaaggtgaaataaaaaataagcc
gttgttcttgctctcacagaagcaattgcaggttttatgagggaaacaat
gaacgtgtcaccctggatttggcaggaggaaagagctgggagtatataaa
ttgtcttttgggtgccaactgttacgcagcagaattgtttatattagtaa
aatcctctggttgtaagttatgtaaattgtattttttttcctagacagtg
ttttatgatggaaaggggggcttgggaatgtgtactaaatctgaaatggt
ctcatgcttaaataccgcaatgtggtagacagttaatcttccaaacagat
agcgaacgcaggcaactgcttcattaccatcaacatatgtctctcactat
tctggctgctaccttgggattagcttgcaagagctatctcggctgtgggg
ggaaaaatcacacggatttgaccagcattgatgagcattaaaacttagct
ctgaagacaacagtacggtctgacaggacctagcaggagaggggttagga
aactgactatgtagctttgtaggacaccttcataaaccagagagtcagga
gattgcttaggagatttctaatgctgcaggacgcagggatgtccctagtt
accggacaaggatgtgctcatctcttgacctatttgccacttacctttta
gtttctagggatgtgtttccaagagattgtgacatggcttgataattaaa
cagggaactccacttgtccatttaaaaagaaagaaaggaaggaaagaagg
aaaggaaggaaggaaggaaggaaggaagaaagaaggaaaggaaggaaaga
aaaagcagtcctcctcaaagatacatatgactgttccctttcagtatttc
cactgaagtatcaattcttgataatttactttttcttacttattaatttg
ggcagggtgttgagcagagtactcaattaaaataaactctggaatgagca
tgtccacaacccatatgtgtagagaactata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141260703_141261736
seq2: B6Ng01-099A10.g_68_1098

seq1  GAATTCCATCTGCTCATCCATGCTTAGAAAGGTGAAATAAAAAATAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGCTCATCCATGCTTAGAAAGGTGAAATAAAAAATAAGCC  50

seq1  GTTGTTCTTGCTCTCACAGAAGCAATTGCAGGTTTTATGAGGGAAACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCTTGCTCTCACAGAAGCAATTGCAGGTTTTATGAGGGAAACAAT  100

seq1  GAACGTGTCACCCTGGATTTGGCAGGAGGAAAGAGCTGGGAGTATATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTGTCACCCTGGATTTGGCAGGAGGAAAGAGCTGGGAGTATATAAA  150

seq1  TTGTCTTTTGGGTGCCAACTGTTACGCAGCAGAATTGTTTATATTAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTGGGTGCCAACTGTTACGCAGCAGAATTGTTTATATTAGTAA  200

seq1  AATCCTCTGGTTGTAAGTTATGTAAATTGTATTTTTTTTCCTAGACAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTGGTTGTAAGTTATGTAAATTGTATTTTTTTTCCTAGACAGTG  250

seq1  TTTTATGATGGAAAGGGGGGCTTGGGAATGTGTACTAAATCTGAAATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGATGGAAAGGGGGGCTTGGGAATGTGTACTAAATCTGAAATGGT  300

seq1  CTCATGCTTAAATACCGCAATGTGGTAGACAGTTAATCTTCCAAACAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCTTAAATACCGCAATGTGGTAGACAGTTAATCTTCCAAACAGAT  350

seq1  AGCGAACGCAGGCAACTGCTTCATTACCATCAACATATGTCTCTCACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAACGCAGGCAACTGCTTCATTACCATCAACATATGTCTCTCACTAT  400

seq1  TCTGGCTGCTACCTTGGGATTAGCTTGCAAGAGCTATCTCGGCTGTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGCTACCTTGGGATTAGCTTGCAAGAGCTATCTCGGCTGTGGGG  450

seq1  GGAAAAATCACACGGATTTGACCAGCATTGATGAGCATTAAAACTTAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAATCACACGGATTTGACCAGCATTGATGAGCATTAAAACTTAGCT  500

seq1  CTGAAGACAACAGTACGGTCTGACAGGACCTAGCAGGAGAGGGGTTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGACAACAGTACGGTCTGACAGGACCTAGCAGGAGAGGGGTTAGGA  550

seq1  AACTGACTATGTAGCTTTGTAGGACACCTTCATAAACCAGAGAGTCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTATGTAGCTTTGTAGGACACCTTCATAAACCAGAGAGTCAGGA  600

seq1  GATTGCTTAGGAGATTTCTAATGCTGCAGGACGCAGGGATGTCCCTAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTTAGGAGATTTCTAATGCTGCAGGACGCAGGGATGTCCCTAGTT  650

seq1  ACCGGACAAGGATGTGCTCATCTCTTGACCTATTTGCCACTTACCTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGACAAGGATGTGCTCATCTCTTGACCTATTTGCCACTTACCTTTTA  700

seq1  GTTTCTAGGGATGTGTTTCCAAGAGATTGTGACATGGCTTGATAATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAGGGATGTGTTTCCAAGAGATTGTGACATGGCTTGATAATTAAA  750

seq1  CAGGGAACTCCACTTGTCCATTTAAAAAGAAAGAAAGGAAGGAAGGAAGG  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGGGAACTCCACTTGTCCATTTAAAAAGAAAGAAAGGAAGGAAAGAAGG  800

seq1  -AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  849
       ||||||||||||||||||||||||||| ||| | | |||||||||| ||
seq2  AAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAGGAAAGGAAGGAAAGA  850

seq1  AAAAGCAGTCCTCCTCAAAGATACATATGACTGTTCCCTTTCAGGTATTT  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAAGCAGTCCTCCTCAAAGATACATATGACTGTTCCCTTTCA-GTATTT  899

seq1  CCACTGAAGTATCAATTC-TGATAATTTACTTTTTCTTACTTAATAATTT  948
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  CCACTGAAGTATCAATTCTTGATAATTTACTTTTTCTTACTTATTAATTT  949

seq1  GGGCAAGGGTG-TGAGCAGAGTACTCAA-TAAAATAAACTCTGGAATGAG  996
      |||| |||||| |||||||||||||||| |||||||||||||||||||||
seq2  GGGC-AGGGTGTTGAGCAGAGTACTCAATTAAAATAAACTCTGGAATGAG  998

seq1  CATGGTCCACAAACCCATATGTGTAGGAAGAAACTATA  1034
      ||| |||||| |||||||||||||||  || |||||||
seq2  CAT-GTCCAC-AACCCATATGTGTAG--AG-AACTATA  1031