BAC Information

Click to search

BAC

Clone NameB6Ng01-100N19
Chromosome2 (Build37)
Map Location 142,388,161 - 142,571,648
singlet/doubletdoublet
Overlap geneLOC668913, LOC668914, Kif16b
Upstream genenone
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100N19.bB6Ng01-100N19.g
ACCDH910231DH910232
length971,082
definitionDH910231|Mus musculus domesticus DNA, BAC clone: B6Ng01-100N19, 5' end.DH910232|Mus musculus domesticus DNA, BAC clone: B6Ng01-100N19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,571,553 - 142,571,648)(142,388,161 - 142,389,237)
sequence
caaagagtttttcccataattcttttagtcccacctggagacattgaatg
tatgtatcagcgggagtgtagggtgtgtgtgtgttggaagtgaggtg
gaattcccttgtactggggcatataaagtttgcaagtccaatgggcctct
ctttccagtgatggccgactaggccatcttttgatatatatgcagctaga
gtcaagagctccggggtactggttagctcataatgttgttccacctatag
ggttgcagatccctttagctccttggctactttctctagctcccctagag
gcaaatcttacgtaggcgtttttctcagttgagaatgcctcttgctaaat
gacacaggtgggtgtcaagttgacactgaactagccaggacatcacctca
tagcaaatgggaatcagaaactagggcaggatgtgtagaaagatactaag
acccacccctaataagccttaaatcttgactccacctccaaaagttcaaa
tagactcctcaaatagcacgttcatctaaggagcaagctttcaaaactca
agcctgggtggggcacttcacagtcaaatagcatgtgtgcctagagaaaa
atgggtgataggatttcaagttatttttagtttcttattttagctaatct
ccatgatttttttttaactagatgtaaaattgctttggaaaggatgtgat
ttttaaaatgcaaagcattttacaggtttcaaagccttgtcctaaagtgt
ctgtattcactatgtgccctcatctttacctcattccacatgtgatgaaa
ctgagacatagagcagatctttctgacaaagaatcccaaagtagaatgaa
gacttgaactcaggattagtctgaatgtcgcaggaatcttcccacccaca
gggtttcttaatctttcaggctgctggggtcttccaccttgacagtggag
taaccacagcgtacaaaactccttcctacagcatagcccagttttctaag
cttcaagggttggctctaaagttgggcttggagtttgccctcctcttctg
cagaaagagtattaaaatgattattggaaattctgagtatattcatagaa
tgttcaacgtaaatttcacatgccattttgaaggtatcctttgggtcgga
aaaggtcacttgcccctggctaaccattgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142571553_142571648
seq2: B6Ng01-100N19.b_52_148 (reverse)

seq1  CACCTCACTTCCAACACACACACACCCTACACTCCCGCTGATACATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCACTTCCAACACACACACACCCTACACTCCCGCTGATACATACAT  50

seq1  TCAATGTCTCCAGGTGGGAC-CAAAGAATTATGGGAAAAACTCTTTG  96
      ||||||||||||||||||||  |||||||||||||||||||||||||
seq2  TCAATGTCTCCAGGTGGGACTAAAAGAATTATGGGAAAAACTCTTTG  97

seq1: chr2_142388161_142389237
seq2: B6Ng01-100N19.g_71_1152

seq1  GAATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCT  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCT  50

seq1  CTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGA  100

seq1  GTCAAGAGCTCCGGGGTACTGGTTAGCTCATAATGTTGTTCCACCTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAGCTCCGGGGTACTGGTTAGCTCATAATGTTGTTCCACCTATAG  150

seq1  GGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCCCTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCCCTAGAG  200

seq1  GCAAATCTTACGTAGGCGTTTTTCTCAGTTGAGAATGCCTCTTGCTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCTTACGTAGGCGTTTTTCTCAGTTGAGAATGCCTCTTGCTAAAT  250

seq1  GACACAGGTGGGTGTCAAGTTGACACTGAACTAGCCAGGACATCACCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGTGGGTGTCAAGTTGACACTGAACTAGCCAGGACATCACCTCA  300

seq1  TAGCAAATGGGAATCAGAAACTAGGGCAGGATGTGTAGAAAGATACTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAATGGGAATCAGAAACTAGGGCAGGATGTGTAGAAAGATACTAAG  350

seq1  ACCCACCCCTAATAAGCCTTAAATCTTGACTCCACCTCCAAAAGTTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCCTAATAAGCCTTAAATCTTGACTCCACCTCCAAAAGTTCAAA  400

seq1  TAGACTCCTCAAATAGCACGTTCATCTAAGGAGCAAGCTTTCAAAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCCTCAAATAGCACGTTCATCTAAGGAGCAAGCTTTCAAAACTCA  450

seq1  AGCCTGGGTGGGGCACTTCACAGTCAAATAGCATGTGTGCCTAGAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGGTGGGGCACTTCACAGTCAAATAGCATGTGTGCCTAGAGAAAA  500

seq1  ATGGGTGATAGGATTTCAAGTTATTTTTAGTTTCTTATTTTAGCTAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGATAGGATTTCAAGTTATTTTTAGTTTCTTATTTTAGCTAATCT  550

seq1  CCATGATTTTTTTTTAACTAGATGTAAAATTGCTTTGGAAAGGATGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATTTTTTTTTAACTAGATGTAAAATTGCTTTGGAAAGGATGTGAT  600

seq1  TTTTAAAATGCAAAGCATTTTACAGGTTTCAAAGCCTTGTCCTAAAGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATGCAAAGCATTTTACAGGTTTCAAAGCCTTGTCCTAAAGTGT  650

seq1  CTGTATTCACTATGTGCCCTCATC-TTACCTCATTCCACATGTGATGAAA  699
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGTATTCACTATGTGCCCTCATCTTTACCTCATTCCACATGTGATGAAA  700

seq1  CTGAGACATAGAGCAGATC-TTCTGACAAAGAATCCCAAAGTAGAATGAA  748
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGAGACATAGAGCAGATCTTTCTGACAAAGAATCCCAAAGTAGAATGAA  750

seq1  GACTTGAACTCAGGATTAGTCTGAATGTCGCAGGAATCTTCCCACCCACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAACTCAGGATTAGTCTGAATGTCGCAGGAATCTTCCCACCCACA  800

seq1  GGGTTTCTT-ATCTTTCAGGGCTGCT-GGGTC-TCCACCTTGACAGTGGA  845
      ||||||||| |||||||| ||||||| ||||| |||||||||||||||||
seq2  GGGTTTCTTAATCTTTCA-GGCTGCTGGGGTCTTCCACCTTGACAGTGGA  849

seq1  GTAACCACAGCGTACAAAACTCC-TCCTACAGCATAGCCCAG-TTTCTTA  893
      ||||||||||||||||||||||| |||||||||||||||||| ||||| |
seq2  GTAACCACAGCGTACAAAACTCCTTCCTACAGCATAGCCCAGTTTTCTAA  899

seq1  GCTTCAAGGGTTGGCTCTAAAGTTGGGCTTGGAGTTTG-CCTCCTCTTCT  942
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTTCAAGGGTTGGCTCTAAAGTTGGGCTTGGAGTTTGCCCTCCTCTTCT  949

seq1  GCAGGAGAGAGTAATTAAAATGA-TATTGGAAATTCTGAGTATTATTCAT  991
      ||| || ||||| |||||||||| |||||||||||||||||| |||||||
seq2  GCA-GAAAGAGT-ATTAAAATGATTATTGGAAATTCTGAGTA-TATTCAT  996

seq1  AGAATTGTTCAACGTTATATTTCACATGCCATTTTGAAGGTAT-CTTTGT  1040
      |||| ||||||||| || ||||||||||||||||||||||||| ||||| 
seq2  AGAA-TGTTCAACG-TAAATTTCACATGCCATTTTGAAGGTATCCTTTGG  1044

seq1  GTCTG-AAAGGTCACTTGCCCCTGGCTAAACATTGATT  1077
      ||| | ||||||||||||||||||||||| ||||||||
seq2  GTCGGAAAAGGTCACTTGCCCCTGGCTAACCATTGATT  1082