BAC Information

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BAC

Clone NameB6Ng01-101D08
Chromosome2 (Build37)
Map Location 95,760,756 - 95,914,152
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042843
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101D08.bB6Ng01-101D08.g
ACCDH910471DH910472
length1,1411,115
definitionDH910471|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D08, 5' end.DH910472|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,910,180 - 95,914,152)(95,760,756 - 95,761,876)
sequence
gaattcattctttagatgttaagactacacatttgacctaccttttatcc
tgtagagaaatttagctactaggaaagtcttaaatctctctgtagctatg
taatcaatgttctgtctgctgctaaattttagagatgtgaagatgggttt
cagtaaaaaatcatatcttgcaaatgagttaattatttttgtttagattg
tggtgattcagtaattgtagattaattggttccatctgctttgcgatttt
ccaattaacaggtaatagcttttcaaagttagttcatttctgacatgtgt
aggaatgtatttaagatggtaattttccccctaatgctttctgttgctat
ttatttatttaaatactctgttttcaaatcctaaggtcaatgctactctt
ttactacaactgaggtcttttggggacaaatcttgaacagaatcataaac
ttatgtcattataattggtgttttagattcatttacattaactgatgttc
ctaccattgattaatgacagtaattttttaatgctagtaatgtatcttta
gcctttaatttaaaacttgactgactgtttgatgaagttcttcccagctg
ggttttgatataaatgaagaatcccatctacaggtccctgctgtaaatga
atggtaaacacggaaggaaggagtgggatcttgcatgcgcccactctcaa
ctggccaggaagaacgacgctgctacaggatccttctgcacacatttatt
cagtcctgtttcttcttgtttatatctcccttgttttatatctctcttgt
ttatatatctcccttgttttttatatctcccccttgtttttatatctccc
ttgtttttatatctcccttgtttatatctcccctgtttatatctcccctg
tttatatctcccttgtttttatatctcccttgtttatatctcccttgttt
tatatctcccttgttttatatctcccttgtttttatatctccccgaacct
ggggctctcactcttttatactctcagtccatccacgcacagcaaggcca
cgccacctcacagggcaccagcttcagctattcagggcagcagggcaaat
ctccaccaaattgaatttatggtatctggtcacctgcgcag
gaattcaaactcacctcatatttaaattttagtccaaagcttggaggtaa
tatgttttgtatagaaagacataattaggacagatcagattatcttcggg
agatattagtgccccccacacacacacaccccaccttccttcctccttct
ctgccctgccttgctcaaactgcacttgatatggctaacagagttgatat
agttagacttctctcctgaataccactgtgtccccaggagtggaaataca
tctccattcacaaaaaaatctttctccacttgagctatgatctcaaatat
acaaagatacaatgtatgtaccatcagctctttaaaatatctgcataaat
ccctagctccaattctgcgatggccataagcatggaagcaagaaaaaaat
gtttatgcttgtgtaaaattaaggttttatgcttttttgttagtttttgt
ttgcttgcttattgtcacatagaaaacgtaactgagaacttagtggattt
gaaagactacatagcagactacctcttcatttttcactcatgaattaaag
ttggtagaataaactgtgaaaattaatttttcatatatgttatggataca
tttttggtgttgtatgtcttcctagggaactagaagaaagaacgtaattt
tatttgatagttgtcttttcctggaaaaagtcctacacaaagacagcaat
gaacagtaccatgtagactaatttttatttagtgaaccaatagtcagaat
ccaaaaacttacgggagatagttcagtgaaaatatttggaggaaaataga
ccaaactctttgttagatttctttctttacacaaaaatgtaaataaccat
catcaatagtaaaagtatatctcatttatcacaaatgtatttacttccca
tcatatgcattgatttgccaatcactatgatgtatttgggatataaaaca
tataaacatacatgaaacatatatgttgtaggcttatcagtatccttaaa
gccaaattaaatatacaacaaaccatttgaaaactgtccaaaatttaagt
acatttaagaattaattgttcaaatttattttaaatattaattttgagac
taaaaaccagcatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_95910180_95914152
seq2: B6Ng01-101D08.b_47_1187 (reverse)

seq1  CTGCGCAGGTGTACCAGGATACAGATGAATCCAATTTGGTGGAGATTTGC  50
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCGTGGC  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCTGTGCGTGGATGGGAACTGAGAGTATAAAAGAGTGAGAGGCCCAGG  150
                                                        
seq2  --------------------------------------------------  0

seq1  GTTCGGGGGAGATATAAAAACAAGGGAGATATAAAAACAAGGGAGATATA  200
                                                        
seq2  --------------------------------------------------  0

seq1  AAAACAAGGGAGATATAAAAACAAGGGAGATATAAACAGGGGAGATATAA  250
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGGGGAGATATAAACAAGGGAGATATAAAAACAAGGGAGATATAAAAA  300
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGGGGGAGATATAAAAACAAGGGAGATATATAAACAAGAGAGATATAA  350
                                                        
seq2  --------------------------------------------------  0

seq1  ACAAGGGAGATATAAACAAGAAGAAACAGGACTGAATAAATGTGTGCAGA  400
                                                        
seq2  --------------------------------------------------  0

seq1  AGGATCCTGTAGCAGCGTCGTTCTTCCTGGCCAGTTGAGAGAGCAGACGC  450
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAGTTGGTGCTGAGACCCGGGACGGGACGAGAAGACCTGGGACAAGAA  500
                                                        
seq2  --------------------------------------------------  0

seq1  GACCTGGGACGAGAAGACCCAGAACAAGAAAACCCGGGACGAGAAAACCC  550
                                                        
seq2  --------------------------------------------------  0

seq1  GGGACGAGAAAACCCGGGAAAAGAAACATCTTCAGGCATGAGCGAAGACC  600
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTGCTACAGGGAGGATTCAGAACTGCATAACGGGGAAGAAGGGGTTAA  650
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAGTGTTCCCGTAAAACAGACTGTTGAGAAGGATCTGGCGTGGATTCA  700
                                                        
seq2  --------------------------------------------------  0

seq1  GAACTCTTCAGCTGGGGAACGGTACTGATGAAGAGAAAGAAGAAAGATGA  750
                                                        
seq2  --------------------------------------------------  0

seq1  GGACGGAATAAACTGCTGTTAGAAGGACTGGTGGTCGCATCGTTCTTGCT  800
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTGAGAGTGGGCGCGACAATTGGTGGCCCGTACGGGGAACCGACTCCC  850
                                                        
seq2  --------------------------------------------------  0

seq1  CCACCGAGTTCAGAACTTTCAGCAGTCAGTGGTTGCCGGCAGGGTAAGTT  900
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGGTGAGTGAAACTTGCGACCCCAGAAGTTTGGGAAGGACCTCGGATA  950
                                                        
seq2  --------------------------------------------------  0

seq1  AAATAGAGGTAAGCATAAAGTTGCCAGGAAGCAGGTACAAGGTAACTAAA  1000
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTCATGGCTTTGGGACAAGTTAAGGTTCACGGTTTCAGGATAGATTAA  1050
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAGTATGATAACCTCAGTGTAGTGATCAATAGATCCTCGCTGTGTAGT  1100
                                                        
seq2  --------------------------------------------------  0

seq1  TATGCTTTTTTCTCCCGTTGACCCTTTGTGGGTAGGTCTGATAGTTTTGG  1150
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTGTTTGTTCTGATATATGGACTCTGTTACTGTTTGAAACTGTGTGTA  1200
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGCAGTCAAGACAGGTCAGAAAATCCTTATAGAGCAACAAGAAAGTAT  1250
                                                        
seq2  --------------------------------------------------  0

seq1  GTCAGAAGAGGAAAAGGGCTTAAAAAGAAAAAGGAAAAAGAAAGGAGACA  1300
                                                        
seq2  --------------------------------------------------  0

seq1  CAGTGTTATCAGGTGAACAGAAAGGACAAAATAAAAGAGCCGAGGTGGAG  1350
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGAAGGCGAATTAGCTTTTGTGCCGCCTCCCTATGCCTCCTCAGCAGC  1400
                                                        
seq2  --------------------------------------------------  0

seq1  CACCTGTAGGCAGACCTTCTGTCCGGAGGTCTGGAAAGAGGATAGATTCT  1450
                                                        
seq2  --------------------------------------------------  0

seq1  CCTTGCTGGGATGTCCTATTTTCACTGATCAAGCTGAATTTGCATGGGAT  1500
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGATATGCTGCTTGGTCAAGGTCGATTTGCACAACAACAGTCAGGATA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  TCCAGTGCAGGTGTTTAAGCAGGTAAATCAGATTGCCATAAGGGCACGGA  1600
                                                        
seq2  --------------------------------------------------  0

seq1  AACCATTGCCCAACAGAGGGGAAGCTAGTGAAAACTTGACTTTCATATTG  1650
                                                        
seq2  --------------------------------------------------  0

seq1  ACTCCCCAGATGGACACAAGGTGATTGAGGTTATGGTCTCATCACCACGA  1700
                                                        
seq2  --------------------------------------------------  0

seq1  GGTATTGTGTCCATCCCCCTGGGGATCGACAGGATCAGGTGTTGACGTGG  1750
                                                        
seq2  --------------------------------------------------  0

seq1  GCGAGAGGGTCTGTTTGTGTGTTTCCACAGGACCAGACGGAACCTCTTTG  1800
                                                        
seq2  --------------------------------------------------  0

seq1  GGTGCCGGAGAGATTGGTGAGACGCTGCAAGAATGAGGCTCCTGATCCAG  1850
                                                        
seq2  --------------------------------------------------  0

seq1  TTGCCCCTGTGGATGTGGTGGATGATCCCACAAGCACAAAGGATGGAGCC  1900
                                                        
seq2  --------------------------------------------------  0

seq1  GAGATGGGAGATCCTTTCGGTGTTCCAGAAGCCGATACCAGCTCGACATG  1950
                                                        
seq2  --------------------------------------------------  0

seq1  ACGTTCAAATTTTTCCATGCCTTTTTGATCCATGAATTCCCCTTAAAGAG  2000
                                                        
seq2  --------------------------------------------------  0

seq1  ATAGCCCCTCTGGCTATCTATCCCTTGCTTCAGGGAAGATGAGTGGGGAT  2050
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGCCCTGGGATGTATGCTTGTTATAGTGTGTGTGTGTTTTGTGTTTG  2100
                                                        
seq2  --------------------------------------------------  0

seq1  GCACATGTGTTAGGTGCAGAGTGTGCGGCCCGCACTTTCGCCATGGTAGT  2150
                                                        
seq2  --------------------------------------------------  0

seq1  GTAGGCTTTTGCTGCAGTGGAGGCGGGACAATCTCCTCAGATTCGGTTTG  2200
                                                        
seq2  --------------------------------------------------  0

seq1  CCGCTCTAAAAGAAATTATGCTGCGTTATGCCATGGGTTGCGAGGCTAAG  2250
                                                        
seq2  --------------------------------------------------  0

seq1  CACTGCACAGAGGATAGCTTGCTGTTGGCATCCTGTGGAAGGCACGTCTG  2300
                                                        
seq2  --------------------------------------------------  0

seq1  ATTGCATGAAGGTTCAGTGTCCTAGTTCCCTTCCCCCAGGAAAAACGACA  2350
                                                        
seq2  --------------------------------------------------  0

seq1  CGGGAGCTGGCCAAGACCTCTCTGGGTGATGAGCCTAAGGGATGGTTTTG  2400
                                                        
seq2  --------------------------------------------------  0

seq1  TGTAGGGCCCCTATGCTTGCACACTGGGGATCAGACCTCTACCTTCACCC  2450
                                                        
seq2  --------------------------------------------------  0

seq1  ATGAGGCTTGCTTGCAGCAATTAAGATCTGGCCATAGGTTAATTAACATC  2500
                                                        
seq2  --------------------------------------------------  0

seq1  CTGGCCTTTTGATGCACCTGCCACAAGCAAAACACAATCTCCCCAGGAAT  2550
                                                        
seq2  --------------------------------------------------  0

seq1  GGCTTGGCATGATAGAGAGGTAGTCAGTGATAAGACTCCCTGGGCATGTC  2600
                                                        
seq2  --------------------------------------------------  0

seq1  ACCAACCTAAGACAGGGATCAAACCAATGCTGTTTGTCACCCAAGGACGG  2650
                                                        
seq2  --------------------------------------------------  0

seq1  GTAAGGGGCATGGCTGCGGGGGGCTATCTACAGACATTCTCTCTGCCAGA  2700
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGAAAAAAGGGGGAGATGTTAGGAGCAGGTGTGGCGGCAGTCCTAAAG  2750
                                                        
seq2  --------------------------------------------------  0

seq1  GCTCCAGGGACTGTAGCTAAGTCATATGACTTGCACCTGACTTCCTCATA  2800
                                                        
seq2  --------------------------------------------------  0

seq1  TAAGACACAAACATCTTGAGTGCTGCGCAGGTGTACCAGGATACAGATGA  2850
                            ||||||||||| |||| |||||  || |
seq2  ----------------------CTGCGCAGGTG-ACCA-GATAC-CATAA  25

seq1  ATCCAATTTGGTGGAGATTTGCCCCTGCTGCCCTGATTAGCTGAAGCTGC  2900
      || |||||||||||||||||| |||||||||||||| |||||||||||| 
seq2  ATTCAATTTGGTGGAGATTTG-CCCTGCTGCCCTGAATAGCTGAAGCTG-  73

seq1  GTGCCTGGTGAGGTGGCGTGGCC-TGCTGTGCGTGGATGGGAACTGAGAG  2949
      |||||  |||||||||||||||| ||||||||||||||||  ||||||||
seq2  GTGCCCTGTGAGGTGGCGTGGCCTTGCTGTGCGTGGATGG--ACTGAGAG  121

seq1  TATAAAAGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAAAACAAGGGA  2999
      |||||||||||||||| |||| ||||| ||||||||||||||||||||||
seq2  TATAAAAGAGTGAGAGCCCCA-GGTTC-GGGGAGATATAAAAACAAGGGA  169

seq1  GATATAAAAACAAGGGAGATATAAAAACAAGGGAGATATAAAAACAAGGG  3049
      ||||| |||||||||||||||| ||||||||||||||||  |||||||||
seq2  GATAT-AAAACAAGGGAGATAT-AAAACAAGGGAGATAT--AAACAAGGG  215

seq1  AGATATAAAAACAAGGGAGATATAAACAGGGGAGATATAAACAGGGGAGA  3099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAAAACAAGGGAGATATAAACAGGGGAGATATAAACAGGGGAGA  265

seq1  TATAAACAAGGGAGATATAAAAACAAGGGAGATATAAAAACAAGGGGGAG  3149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACAAGGGAGATATAAAAACAAGGGAGATATAAAAACAAGGGGGAG  315

seq1  ATAT-AAAAACAAGGGAGATATATAAACAAGAGAGATAT-AAACAAGGGA  3197
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATATAAAAAACAAGGGAGATATATAAACAAGAGAGATATAAAACAAGGGA  365

seq1  GATATAAACAAGAAGAAACAGGACTGAATAAATGTGTGCAGAAGGATCCT  3247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAACAAGAAGAAACAGGACTGAATAAATGTGTGCAGAAGGATCCT  415

seq1  GTAGCAGCGTCGTTCTTCCTGGCCAGTTGAGAGTGGGCGCATGCAAGATC  3297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGCGTCGTTCTTCCTGGCCAGTTGAGAGTGGGCGCATGCAAGATC  465

seq1  CCACTCCTTCCTTCCGTGTTTACCATTCATTTACAGCAGGGACCTGTAGA  3347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCTTCCTTCCGTGTTTACCATTCATTTACAGCAGGGACCTGTAGA  515

seq1  TGGGATTCTTCATTTATATCAAAACCCAGCTGGGAAGAACTTCATCAAAC  3397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTCTTCATTTATATCAAAACCCAGCTGGGAAGAACTTCATCAAAC  565

seq1  AGTCAGTCAAGTTTTAAATTAAAGGCTAAAGATACATTACTAGCATTAAA  3447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTCAAGTTTTAAATTAAAGGCTAAAGATACATTACTAGCATTAAA  615

seq1  AAATTACTGTCATTAATCAATGGTAGGAACATCAGTTAATGTAAATGAAT  3497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTGTCATTAATCAATGGTAGGAACATCAGTTAATGTAAATGAAT  665

seq1  CTAAAACACCAATTATAATGACATAAGTTTATGATTCTGTTCAAGATTTG  3547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACACCAATTATAATGACATAAGTTTATGATTCTGTTCAAGATTTG  715

seq1  TCCCCAAAAGACCTCAGTTGTAGTAAAAGAGTAGCATTGACCTTAGGATT  3597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAAAGACCTCAGTTGTAGTAAAAGAGTAGCATTGACCTTAGGATT  765

seq1  TGAAAACAGAGTATTTAAATAAATAAATAGCAACAGAAAGCATTAGGGGG  3647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAGAGTATTTAAATAAATAAATAGCAACAGAAAGCATTAGGGGG  815

seq1  AAAATTACCATCTTAAATACATTCCTACACATGTCAGAAATGAACTAACT  3697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACCATCTTAAATACATTCCTACACATGTCAGAAATGAACTAACT  865

seq1  TTGAAAAGCTATTACCTGTTAATTGGAAAATCGCAAAGCAGATGGAACCA  3747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGCTATTACCTGTTAATTGGAAAATCGCAAAGCAGATGGAACCA  915

seq1  ATTAATCTACAATTACTGAATCACCACAATCTAAACAAAAATAATTAACT  3797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCTACAATTACTGAATCACCACAATCTAAACAAAAATAATTAACT  965

seq1  CATTTGCAAGATATGATTTTTTACTGAAACCCATCTTCACATCTCTAAAA  3847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCAAGATATGATTTTTTACTGAAACCCATCTTCACATCTCTAAAA  1015

seq1  TTTAGCAGCAGACAGAACATTGATTACATAGCTACAGAGAGATTTAAGAC  3897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAGCAGACAGAACATTGATTACATAGCTACAGAGAGATTTAAGAC  1065

seq1  TTTCCTAGTAGCTAAATTTCTCTACAGGATAAAAGGTAGGTCAAATGTGT  3947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGTAGCTAAATTTCTCTACAGGATAAAAGGTAGGTCAAATGTGT  1115

seq1  AGTCTTAACATCTAAAGAATGAATTC  3973
      ||||||||||||||||||||||||||
seq2  AGTCTTAACATCTAAAGAATGAATTC  1141

seq1: chr2_95760756_95761876
seq2: B6Ng01-101D08.g_68_1182

seq1  GAATTCAAACTCACCTCATATTTAAATTTTAGTCCAAAGCTTGGAGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTCACCTCATATTTAAATTTTAGTCCAAAGCTTGGAGGTAA  50

seq1  TATGTTTTGTATAGAAAGACATAATTAGGACAGATCAGATTATCTTCGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTGTATAGAAAGACATAATTAGGACAGATCAGATTATCTTCGGG  100

seq1  AGATATTAGTGCCCCCCACACACACACACCCCACCTTCCTTCCTCCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTAGTGCCCCCCACACACACACACCCCACCTTCCTTCCTCCTTCT  150

seq1  CTGCCCTGCCTTGCTCAAACTGCACTTGATATGGCTAACAGAGTTGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTGCCTTGCTCAAACTGCACTTGATATGGCTAACAGAGTTGATAT  200

seq1  AGTTAGACTTCTCTCCTGAATACCACTGTGTCCCCAGGAGTGGAAATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGACTTCTCTCCTGAATACCACTGTGTCCCCAGGAGTGGAAATACA  250

seq1  TCTCCATTCACAAAAAAATCTTTCTCCACTTGAGCTATGATCTCAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTCACAAAAAAATCTTTCTCCACTTGAGCTATGATCTCAAATAT  300

seq1  ACAAAGATACAATGTATGTACCATCAGCTCTTTAAAATATCTGCATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATACAATGTATGTACCATCAGCTCTTTAAAATATCTGCATAAAT  350

seq1  CCCTAGCTCCAATTCTGCGATGGCCATAAGCATGGAAGCAAGAAAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCTCCAATTCTGCGATGGCCATAAGCATGGAAGCAAGAAAAAAAT  400

seq1  GTTTATGCTTGTGTAAAATTAAGGTTTTATGCTTTTTTGTTAGTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGCTTGTGTAAAATTAAGGTTTTATGCTTTTTTGTTAGTTTTTGT  450

seq1  TTGCTTGCTTATTGTCACATAGAAAACGTAACTGAGAACTTAGTGGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGCTTATTGTCACATAGAAAACGTAACTGAGAACTTAGTGGATTT  500

seq1  GAAAGACTACATAGCAGACTACCTCTTCATTTTTCACTCATGAATTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACTACATAGCAGACTACCTCTTCATTTTTCACTCATGAATTAAAG  550

seq1  TTGGTAGAATAAACTGTGAAAATTAATTTTTCATATATGTTATGGATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGAATAAACTGTGAAAATTAATTTTTCATATATGTTATGGATACA  600

seq1  TTTTTGGTGTTGTATGTCTTCCTAGGGAACTAGAAGAAAGAACGTAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTGTTGTATGTCTTCCTAGGGAACTAGAAGAAAGAACGTAATTT  650

seq1  TATTTGATAGTTGTCTTTTCCTGGAAAAAGTCCTACACAAAGACAGCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGATAGTTGTCTTTTCCTGGAAAAAGTCCTACACAAAGACAGCAAT  700

seq1  GAACAGTACCATGTAGACTAA-TTTTATTTAGTGAACCAATAGTCAGAAT  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAACAGTACCATGTAGACTAATTTTTATTTAGTGAACCAATAGTCAGAAT  750

seq1  CCAAAAACTTACGGGAGA-AGTTCAGTGAAAATATTTGGAGGAAAATAGA  798
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCAAAAACTTACGGGAGATAGTTCAGTGAAAATATTTGGAGGAAAATAGA  800

seq1  CCAAACTCTTTGTTAGATTTCTTTCTTTACACAAAAATGTAAATAACCAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTCTTTGTTAGATTTCTTTCTTTACACAAAAATGTAAATAACCAT  850

seq1  CATCAATAGTAAAAGTATATCTCATTTATCACAAATGTATTTACTTCCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATAGTAAAAGTATATCTCATTTATCACAAATGTATTTACTTCCCA  900

seq1  TCATATGCATTGATTTGCCAATCACTATGATGTATTTGGGATATAAAACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGCATTGATTTGCCAATCACTATGATGTATTTGGGATATAAAACA  950

seq1  TATAAACATACATGAAACATATATGTTGTAGGCTTATCAGTATCCTTAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACATACATGAAACATATATGTTGTAGGCTTATCAGTATCCTTAAA  1000

seq1  GCCAAATTAAATATACAAACAAACCATTTGAAAACTGTCACAAAATTAAA  1048
      |||||||||||||||| |||||||||||||||||||||| ||||||| ||
seq2  GCCAAATTAAATATAC-AACAAACCATTTGAAAACTGTC-CAAAATTTAA  1048

seq1  GTACATTTAAGATATAATATGTTCAAATTTATTTTAAATTATTAATGTTT  1098
      ||||||||||||  |||| ||||||||||||||||||| ||||||    |
seq2  GTACATTTAAGAATTAAT-TGTTCAAATTTATTTTAAA-TATTAA----T  1092

seq1  TTGGAGACTAAGACACAGCATGT  1121
      || |||||||| |  ||||||||
seq2  TTTGAGACTAAAAACCAGCATGT  1115