BAC Information

Click to search

BAC

Clone NameB6Ng01-101D15
Chromosome2 (Build37)
Map Location 69,032,436 - 69,033,540
singlet/doubletsinglet
Overlap geneSpc25
Upstream geneStk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6, Nostrin
Downstream geneG6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650, Myo3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101D15.bB6Ng01-101D15.g
ACCDH910483DH910484
length1,2571,091
definitionDH910483|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D15, 5' end.DH910484|Mus musculus domesticus DNA, BAC clone: B6Ng01-101D15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctggaccccattttttaatggggttatttgatt
ttctggagtccacttcttgagttctttatatatactggatattagtcccc
tatctgatttagaataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgccttgcagaagctttgcaattttat
gaggtcccatttgttgattcttgatcttagagcacaaaccattgctgttc
tattcaggaatttttcccctgtacccatatcttcgaggcttttccctaca
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggagataggaatggatcaattcaca
ttcttctacatgataactgccagttgtgccagcaccacttgtcgaaaatg
ctgtcttttttccactggatggttttagctcccttgtgaaagatcaagtg
accataggtgtgtgggttaatttctgggtcttcaattctattccattgtt
ctacttgtctgtcgatataccagtactatgcagtttttatcacaattgct
ctgcagtacagctttaggtcaggcatggtgattccaccagagcttctttt
atccttgagaagggtttttgctatcctaggttttttgttactccagatga
atttgcagattcccctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagctatttt
tactatattgatcttctttatttctttcttcagagacttgttcttatcat
acagatcattcatttccttagttagagtcacgcccaggtattttaatatt
acttgtgactattgagaacggtgttgtttccctaatttctttctcagcct
gtttatcctttgtgtacagaaaggcatgacttgttttagttaattttaat
cagccatttcattgaagctgtttctcaggtttaggagttccttggtagat
tttagggtcattatatataccaacatacatctgcaaaaggaattttgact
tctctttccaatgtatcctgaactcttttggtgctcaaatgctccggcca
gggaatcaagatctagtttgggaaggtagggggaagtgcagaccggtcca
gtctggatttagaggatgctctccaactacttccatatcctggatagtgg
atctcat
gaattcctctggatatatacagtaacaaagaacaaacctatatcaattat
gaaccttagctataaaagccttccgaatattggcaagaaaagctgaaaaa
ttgttggtcttcctgactttctcctgaaattctgctaggcactcaagatg
aggcgaactgtcgtacactagaggaaaaacaaagaagatgagttaaatga
gggagggtgtgtgtgtgtagaagtgtttcaacttaagctctcagctggtc
tgaatgggaattatactttactaagatgctctgaacataaagatatacta
atacatttgaatttcacaagtaatcttttagtcctttcctttgcttaatc
cctaaatattcaaattgtaagtactgcaatccagatttaaatctaagcat
ggtatccaaaggactgagagctgagtgacacttgagtgctatttctatca
tctttcttatgtacatttgttttaactattaaacatcattttctgtgcaa
aagtttgggttggcatctagtttctttccacaatatgaaaaaaaggctta
actttcaatgccaattctcaaaagaattgagaattagcactgaaacatgg
tctcactatgtaggtctggctgacctgcaacagaccagactagctttgaa
ctcagagatccatctgtttctgcctcttaagttctgggattgaaggcaag
aactaccatacttggcctcaactcaatgcaaaatcttttttttctctttt
aaaccttttaaacacacatcaaacttttattcctataagtagaactattc
ctgaaacagcacaaaatgttccctctctttttcttccatccgcatctttc
catgtgtcctatgtctttctctttgccctcctaattttctgtctcctccc
tctccattcttcccttctctcttcctcagtcctctctgtctgcattctac
atctctgcattcttcatcacttcttttcctctgtcccttcatttgcagac
taaaatggagcctagattcttccatgcagatgagtgctcacactgacctt
tccgcagtgaagatgttgtctttacattgatgctttattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69032436_69033540
seq2: B6Ng01-101D15.g_67_1157

seq1  GAATTCCTCTGGATATATACAGTAACAAAGAACAAACCTATATCAATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGGATATATACAGTAACAAAGAACAAACCTATATCAATTAT  50

seq1  GAACCTTAGCTATAAAAGCCTTCCGAATATTGGCAAGAAAAGCTGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTAGCTATAAAAGCCTTCCGAATATTGGCAAGAAAAGCTGAAAAA  100

seq1  TTGTTGGTCTTCCTGACTTTCTCCTGAAATTCTGCTAGGCACTCAAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTCTTCCTGACTTTCTCCTGAAATTCTGCTAGGCACTCAAGATG  150

seq1  AGGCGAACTGTCGTACACTAGAGGAAAAACAAAGAAGATGAGTTAAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGAACTGTCGTACACTAGAGGAAAAACAAAGAAGATGAGTTAAATGA  200

seq1  GGGAGGGTGTGTGTGTGTAGAAGTGTTTCAACTTAAGCTCTCAGCTGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGTGTGTGTGTGTAGAAGTGTTTCAACTTAAGCTCTCAGCTGGTC  250

seq1  TGAATGGGAATTATACTTTACTAAGATGCTCTGAACATAAAGATATACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGGAATTATACTTTACTAAGATGCTCTGAACATAAAGATATACTA  300

seq1  ATACATTTGAATTTCACAAGTAATCTTTTAGTCCTTTCCTTTGCTTAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTGAATTTCACAAGTAATCTTTTAGTCCTTTCCTTTGCTTAATC  350

seq1  CCTAAATATTCAAATTGTAAGTACTGCAATCCAGATTTAAATCTAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATATTCAAATTGTAAGTACTGCAATCCAGATTTAAATCTAAGCAT  400

seq1  GGTATCCAAAGGACTGAGAGCTGAGTGACACTTGAGTGCTATTTCTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCAAAGGACTGAGAGCTGAGTGACACTTGAGTGCTATTTCTATCA  450

seq1  TCTTTCTTATGTACATTTGTTTTAACTATTAAACATCATTTTCTGTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTATGTACATTTGTTTTAACTATTAAACATCATTTTCTGTGCAA  500

seq1  AAGTTTGGGTTGGCATCTAGTTTCTTTCCACAATATGAAAAAAAGGCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGGGTTGGCATCTAGTTTCTTTCCACAATATGAAAAAAAGGCTTA  550

seq1  ACTTTCAATGCCAATTCTCAAAAGAATTGAGAATTAGCACTGAAACATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAATGCCAATTCTCAAAAGAATTGAGAATTAGCACTGAAACATGG  600

seq1  TCTCACTATGTAGGTCTGGCTGACCTGCAACAGACCAGACTAGCTTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTATGTAGGTCTGGCTGACCTGCAACAGACCAGACTAGCTTTGAA  650

seq1  CTCAGAGATCCATCTGTTTCTGCCTCTTAAGTTCTGGGATTGAAGGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGATCCATCTGTTTCTGCCTCTTAAGTTCTGGGATTGAAGGCAAG  700

seq1  AACTACCATACTTGGCCTCAACTCAATGCAAAATC-TTTTTTTCTCTTTT  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AACTACCATACTTGGCCTCAACTCAATGCAAAATCTTTTTTTTCTCTTTT  750

seq1  AAACC-TTTAAACACACATCAAACTTTTATTCCTATAAGTAGAACTA-TC  797
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAACCTTTTAAACACACATCAAACTTTTATTCCTATAAGTAGAACTATTC  800

seq1  CTGAAACAGCACAAAATGTTCCCTCTCTTTTTCTTCCATCCGCATCTTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACAGCACAAAATGTTCCCTCTCTTTTTCTTCCATCCGCATCTTTC  850

seq1  CATGTGTCCTATGTCTTTCTCTTTGCCCTCCTAATTTTCTGTCTCCTTCC  897
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATGTGTCCTATGTCTTTCTCTTTGCCCTCCTAATTTTCTGTCTCC-TCC  899

seq1  CTCTCCATTCTTCCCTTCTCTCTT-CTCAGTCCTTCTCTGTCTGCATTTC  946
      |||||||||||||||||||||||| |||||||| |||||||||||| |||
seq2  CTCTCCATTCTTCCCTTCTCTCTTCCTCAGTCC-TCTCTGTCTGCA-TTC  947

seq1  TACATCTTCTGCATTTCTTCATCACTTCTTTTTCCTCTGTCCCTTCCATT  996
      |||||| |||||| |||||||||||||| |||||||||||||||| ||||
seq2  TACATC-TCTGCA-TTCTTCATCACTTC-TTTTCCTCTGTCCCTT-CATT  993

seq1  TGCAGTACTAAAAATGGAGCCTAGATTCTTCCCATGCAGGATGAGTGCTC  1046
      ||||| ||| |||||||||||||||||||| ||||||| |||||||||||
seq2  TGCAG-ACT-AAAATGGAGCCTAGATTCTT-CCATGCA-GATGAGTGCTC  1039

seq1  CAGCACTGACCTTTACGGCAGTGAAGATTTGGTTGCTTTTACATGAATGT  1096
         ||||||||||| | |||||||||||   ||||  |||||||  ||| 
seq2  --ACACTGACCTTT-CCGCAGTGAAGAT---GTTGTCTTTACATTGATG-  1082

seq1  CTTTATTAT  1105
      |||||||||
seq2  CTTTATTAT  1091