BAC Information

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BAC

Clone NameB6Ng01-101F02
Chromosome2 (Build37)
Map Location 19,611,380 - 19,788,912
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667477, LOC100041448, BC061194, LOC667493, LOC100041479, Pip5k2a, 4930426L09Rik, LOC667521, Armc3, Msrb2, LOC100041196, Ptf1a, LOC100041534, 4921504E06Rik, LOC100041244, Otud1, LOC667564
Downstream geneLOC100041302, LOC433406, LOC654360, LOC667609, Etl4, Arhgap21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101F02.bB6Ng01-101F02.g
ACCDH910539DH910540
length1201,074
definitionDH910539|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F02, 5' end.DH910540|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,611,380 - 19,611,499)(19,787,838 - 19,788,912)
sequence
ttttcattggatgggactgtttatgaggcagtaggagactcagttgccaa
gctgaacttaaatggcaacctgttttgtgtatgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtattgggtg
gaattcctattaatattgattttagtagtatcagacagcactttacccaa
tgttcaactgttgcccagcatgccagggagagatgagttccccttagttc
tcttcctagaaaagaggtgtgccctaagtggaagtagccattaagagcaa
gaagacccttgattagaactttgcagtatgggttatgttcaccacattag
aactcatgcttgtcttgtcttgtcttgtctttggcaaatacacctgatga
cacttgcctcagaatgatgggaggaaatcaaaattaatcacagtatgtga
agtctagtacctaaaaaaggagttgataaatgtcatcctctgatgacatc
ttttctgtgtttggctgttatgttctcagtctgacctaatttcaagggaa
gacaaatgtatactgtaaagagatatgtggtatggcttacccagagcctt
taccatctggcctggacctttccatcagcatcagggccatgatcatttag
tgggcaaatccaagactgatatgtgtagtggcaggattcaggcagatctg
aggactttctaggtcaaacagaaagatgaaaactattggcaaacagcaga
tctgaggcccagtcatgggtagacacctgtgatgacatctatgaatagag
atgacatttggcatctgtgctggctggtcttctgtcaacctgatataagc
tagagctatctgaaagaaaggaacctcagtagagaaaatgcttctgtaag
acccagctgtaaggcctttacttaatttgtgattgatggggaatgctcag
cttattctaagtggtgccatcactggactggtggtcctgcattctacaat
cagaccaagcaaaccatatggactaagccagtaaggagcactcctccatg
atcttctgcatcagctcttacctccagattcctgacttgagttcctgtcc
tgactctctatgacaatgaacagcaatattcgaaatgtaagctgaaataa
ccctttttttccccagaattgtctttggtcagtgcttccttgtagcatag
aaactctctaatgaagacacgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_19611380_19611499
seq2: B6Ng01-101F02.b_52_171

seq1  TTTTCATTGGATGGGACTGTTTAGGAGGCAGTAGGAGACTCAGTTGCCAA  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTTCATTGGATGGGACTGTTTATGAGGCAGTAGGAGACTCAGTTGCCAA  50

seq1  GCTGAACTTAAATGGCAACCTGTTTTGTGTATGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACTTAAATGGCAACCTGTTTTGTGTATGTGTGTGTGTGTGTGTGT  100

seq1  GTGTGTGTGTGTATTGGGTG  120
      ||||||||||||||||||||
seq2  GTGTGTGTGTGTATTGGGTG  120

seq1: chr2_19787838_19788912
seq2: B6Ng01-101F02.g_70_1143 (reverse)

seq1  ATGC-TGTCTTCATT--AGAGTTTCTATTGCTACAAGGAAGCACCATGAC  47
      |||| ||||||||||  |||||||||| ||||||||||||||||  ||||
seq2  ATGCGTGTCTTCATTAGAGAGTTTCTA-TGCTACAAGGAAGCAC--TGAC  47

seq1  CAAAAAGGCAA-TCTGGGGGAGAAAAGGGTTTATTTCAGCTTACATTTCG  96
      |  |||| ||| ||||||| | ||||||| ||||||||||||||||||||
seq2  C--AAAGACAATTCTGGGGAAAAAAAGGG-TTATTTCAGCTTACATTTCG  94

seq1  -ATATTGCTGTTCATTGTCATAGAGAGTCAGGACAGGAACTCAAGTCAGG  145
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGCTGTTCATTGTCATAGAGAGTCAGGACAGGAACTCAAGTCAGG  144

seq1  AATCTGAAGGTAGGAGCTGATGCAG-AGATCATGGAGGAGTGCTCCTTAC  194
      |||||| ||||| |||||||||||| ||||||||||||||||||||||||
seq2  AATCTGGAGGTAAGAGCTGATGCAGAAGATCATGGAGGAGTGCTCCTTAC  194

seq1  TGGCTTAGTCCATATGGTTTGCTTGGTCTGATTTGTAGAATGCAGGACCA  244
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGCTTAGTCCATATGGTTTGCTTGGTCTGA-TTGTAGAATGCAGGACCA  243

seq1  CCAGTCCAGTGATGGCACCACTTAGAATAAGCTGAGCATTCCCCATCAAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCAGTGATGGCACCACTTAGAATAAGCTGAGCATTCCCCATCAAT  293

seq1  CACAAATTAAGTAAAGGCCTTACAGCTGGGTCTTACAGAAGCATTTTCTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATTAAGTAAAGGCCTTACAGCTGGGTCTTACAGAAGCATTTTCTC  343

seq1  TACTGAGGTTCCTTTCTTTCAGATAGCTCTAGCTTATATCAGGTTGACAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGTTCCTTTCTTTCAGATAGCTCTAGCTTATATCAGGTTGACAG  393

seq1  AAGACCAGCCAGCACAGATGCCAAATGTCATCTCTATTCATAGATGTCAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGCCAGCACAGATGCCAAATGTCATCTCTATTCATAGATGTCAT  443

seq1  CACAGGTGTCTACCCATGACTGGGCCTCAGATCTGCTGTTTGCCAATAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGTCTACCCATGACTGGGCCTCAGATCTGCTGTTTGCCAATAGT  493

seq1  TTTCATCTTTCTGTTTGACCTAGAAAGTCCTCAGATCTGCCTGAATCCTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTTTCTGTTTGACCTAGAAAGTCCTCAGATCTGCCTGAATCCTG  543

seq1  CCACTACACATATCAGTCTTGGATTTGCCCACTAAATGATCATGGCCCTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACACATATCAGTCTTGGATTTGCCCACTAAATGATCATGGCCCTG  593

seq1  ATGCTGATGGAAAGGTCCAGGCCAGATGGTAAAGGCTCTGGGTAAGCCAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGATGGAAAGGTCCAGGCCAGATGGTAAAGGCTCTGGGTAAGCCAT  643

seq1  ACCACATATCTCTTTACAGTATACATTTGTCTTCCCTTGAAATTAGGTCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATATCTCTTTACAGTATACATTTGTCTTCCCTTGAAATTAGGTCA  693

seq1  GACTGAGAACATAACAGCCAAACACAGAAAAGATGTCATCAGAGGATGAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGAACATAACAGCCAAACACAGAAAAGATGTCATCAGAGGATGAC  743

seq1  ATTTATCAACTCCTTTTTTAGGTACTAGACTTCACATACTGTGATTAATT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAACTCCTTTTTTAGGTACTAGACTTCACATACTGTGATTAATT  793

seq1  TTGATTTCCTCCCATCATTCTGAGGCAAGTGTCATCAGGTGTATTTGCCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCCTCCCATCATTCTGAGGCAAGTGTCATCAGGTGTATTTGCCA  843

seq1  AAGACAAGACAAGACAAGACAAGCATGAGTTCTAATGTGGTGAACATAAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGACAAGACAAGACAAGCATGAGTTCTAATGTGGTGAACATAAC  893

seq1  CCATACTGCAAAGTTCTAATCAAGGGTCTTCTTGCTCTTAATGGCTACTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTGCAAAGTTCTAATCAAGGGTCTTCTTGCTCTTAATGGCTACTT  943

seq1  CCACTTAGGGCACACCTCTTTTCTAGGAAGAGAACTAAGGGGAACTCATC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAGGGCACACCTCTTTTCTAGGAAGAGAACTAAGGGGAACTCATC  993

seq1  TCTCCCTGGCATGCTGGGCAACAGTTGAACATTGGGTAAAGTGCTGTCTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGGCATGCTGGGCAACAGTTGAACATTGGGTAAAGTGCTGTCTG  1043

seq1  ATACTACTAAAATCAATATTAATAGGAATTC  1075
      |||||||||||||||||||||||||||||||
seq2  ATACTACTAAAATCAATATTAATAGGAATTC  1074