BAC Information

Click to search

BAC

Clone NameB6Ng01-101K10
Chromosome2 (Build37)1 (Build37)
Map Location 142,776,386 - 142,776,91625,285,106 - 25,286,030
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101K10.bB6Ng01-101K10.g
ACCDH910769DH910770
length849920
definitionDH910769|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K10, 5' end.DH910770|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,386 - 142,776,916)(25,285,106 - 25,286,030)
sequence
gagttctttgtttagctctgagccccacctttttaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatattggatattagtcc
cctatctgatttaggataagtaaagatcatttcccaatctgttgatggcc
tttttgtcttattgacagtgtcctttgccatacagaagcttggcaatttt
atgaggtcccatttcttgattcttgatcttacagcacaagccattgcttt
tcttcaggaattttttcccctctgcccatatcttcgaaggttttccctac
tttctcctctgtaagtttcagtgtctctggttttatgtggagttccttga
tccacttagatttgaccttagtacaaggagataggaatgaatcaattcac
attcttctacatgataaccaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggattgttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaattctattccattgg
tctacttgtctgttgctatgccagtaccatgcagtttttatcacaattgc
tctgcagtacagatttaggtcaggcatggtgattccaccagaattttctt
ttatccttgagaagagtttttgctaacctagatttttttgttattccaga
tgaattttgcagattgcccttttctaattcattgaagaattgaggtggaa
ttttgatgaggattacatttgaatctgtagattgcttttgacaagatagc
catttttacatgttgatccatgagcatggggagatcgttccatcttctg
gaattcaattcgccaagctactgtagctgaggagaacaacccgattttgc
caccctgcaaccttttctatttccccctttgaaatgcagttccctggaga
aacactcgccacaatgtccctgcctttgcattaaagccgtgttttccctt
tgttacttactatttctctaggttgctgagccaaaatggcgaaggtagag
agccgatcacataagcatttcgtatgggatgcatcggtaagcacagtttt
acatccctgggtggaccacgttcccaaagactcgttcctgcaaagggggt
ggaggggagatcgggataaatacgcctgacagccaagtccgtaaagaaga
aaatgcagtttaattgagagaatcgcctactgtaattcccgtacaggaaa
aaaaaaatctacttgttgttgaacaggacgtaatttagatgcatctccag
taatgcaaagcgagagtgggaaaaaagcaagcaggcggtggtgcggcgtg
cagagagctgtccagcgccggaggtgctgaaatcaggactagctctgtcc
agccctctgcgagaaacagcggcggcggcagcggcaccagcagccgccga
gcgttggcagacacttgctatgctcatcggatcgtttcaaacactcagag
tgtaaagaggcttttcatattttcataccagctctgattccaggcccgtg
gttttggaccgtgaatgctgtcttttaaaatgcggatttctctgaaagcc
ttgcctaaaagttacatagcttgggttgggtgtatgatcttccccgctgc
tggtaagggatttttcttccctttagaattgctgctgtaaaattcaccct
gggaacggggagaggtataactggttccgactctcactgcctttgcctgg
tatccaaggaggggtgggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776386_142776916
seq2: B6Ng01-101K10.b_364_890 (reverse)

seq1  CAGAAGATGGAAGGATCT-CCCATGCTCATGGATTGGCAGGATCAACATT  49
      |||||||||||| ||||| |||||||||||         ||||||||| |
seq2  CAGAAGATGGAACGATCTCCCCATGCTCAT---------GGATCAACA-T  40

seq1  GTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTC-AATGCAATCC  98
      |||||||||||||||||| |||||||||||||||||||| |||| |||||
seq2  GTAAAAATGGCTATCTTGTCAAAAGCAATCTACAGATTCAAATGTAATCC  90

seq1  CCATCAAAATTCCAACTCAATTCTTCAACGAATTAG-AAGGAGCAATTTG  147
       ||||||||||||| ||||||||||||| ||||||| || | ||||| ||
seq2  TCATCAAAATTCCACCTCAATTCTTCAATGAATTAGAAAAGGGCAATCTG  140

seq1  C-AAATTCATCTGGAATAAC-AAAAAACCTAGGATAGCAAAAAGTCTTCT  195
      | |||||||||||||||||| |||||| ||||| ||||||||| ||||||
seq2  CAAAATTCATCTGGAATAACAAAAAAATCTAGGTTAGCAAAAACTCTTCT  190

seq1  CAAGGATAAAAG-AACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTT  244
      |||||||||||| ||  ||||||||||||||||||||||||||||| || 
seq2  CAAGGATAAAAGAAAATTCTGGTGGAATCACCATGCCTGACCTAAATCTG  240

seq1  TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAG  294
      |||| |||||||||||||||||||||||||||||||||| ||||  ||||
seq2  TACTGCAGAGCAATTGTGATAAAAACTGCATGGTACTGGCATAGCAACAG  290

seq1  ACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  344
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAGATGAACCCACACA  340

seq1  CCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAG  394
      ||||||||||||||||||| ||||||||||||||||| |||||| |||| 
seq2  CCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACAATCCAGTGGAAA  390

seq1  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATG  444
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  AAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTATCATG  440

seq1  TAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAAT  494
      |||||||||| |||| ||| ||| | ||||||||||||||||||||||||
seq2  TAGAAGAATGTGAATTGATTCATTCCTATCTCCTTGTACTAAGGTCAAAT  490

seq1  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  531
      ||||||||||||||||||| |||||||||||||||||
seq2  CTAAGTGGATCAAGGAACTCCACATAAAACCAGAGAC  527

seq1: chr1_25285106_25286030
seq2: B6Ng01-101K10.g_72_991

seq1  GAATTCAATTCGCCAAGCTACTGTAGCTGAGGAGAACAACCCGATTTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCGCCAAGCTACTGTAGCTGAGGAGAACAACCCGATTTTGC  50

seq1  CACCCTGCAACCTTTTCTATTTCCCCCTTTGAAATGCAGTTCCCTGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGCAACCTTTTCTATTTCCCCCTTTGAAATGCAGTTCCCTGGAGA  100

seq1  AACACTCGCCACAATGTCCCTGCCTTTGCATTAAAGCCGTGTTTTCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCGCCACAATGTCCCTGCCTTTGCATTAAAGCCGTGTTTTCCCTT  150

seq1  TGTTACTTACTATTTCTCTAGGTTGCTGAGCCAAAATGGCGAAGGTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTACTATTTCTCTAGGTTGCTGAGCCAAAATGGCGAAGGTAGAG  200

seq1  AGCCGATCACATAAGCATTTCGTATGGGATGCATCGGTAAGCACAGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGATCACATAAGCATTTCGTATGGGATGCATCGGTAAGCACAGTTTT  250

seq1  ACATCCCTGGGTGGACCACGTTCCCAAAGACTCGTTCCTGCAAAGGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTGGGTGGACCACGTTCCCAAAGACTCGTTCCTGCAAAGGGGGT  300

seq1  GGAGGGGAGATCGGGATAAATACGCCTGACAGCCAAGTCCGTAAAGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGAGATCGGGATAAATACGCCTGACAGCCAAGTCCGTAAAGAAGA  350

seq1  AAATGCAGTTTAATTGAGAGAATCGCCTACTGTAATTCCCGTACAGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGTTTAATTGAGAGAATCGCCTACTGTAATTCCCGTACAGGAAA  400

seq1  AAAAAAATCTACTTGTTGTTGAACAGGACGTAATTTAGATGCATCTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCTACTTGTTGTTGAACAGGACGTAATTTAGATGCATCTCCAG  450

seq1  TAATGCAAAGCGAGAGTGGGAAAAAAGCAAGCAGGCGGTGGTGCGGCGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCAAAGCGAGAGTGGGAAAAAAGCAAGCAGGCGGTGGTGCGGCGTG  500

seq1  CAGAGAGCTGTCCAGCGCCGGAGGTGCTGAAATCAGGACTAGCTCTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCTGTCCAGCGCCGGAGGTGCTGAAATCAGGACTAGCTCTGTCC  550

seq1  AGCCCTCTGCGAGAAACAGCGGCGGCGGCAGCGGCACCAGCAGCCGCCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTGCGAGAAACAGCGGCGGCGGCAGCGGCACCAGCAGCCGCCGA  600

seq1  GCGTTGGCAGACACTTGCTATGCTCATCGGATCGTTTCAAACACTCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTGGCAGACACTTGCTATGCTCATCGGATCGTTTCAAACACTCAGAG  650

seq1  TGTAAAGAGGCTTTTCATATTTTCATACCAGCTCTGATTCCAGGCCCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAGGCTTTTCATATTTTCATACCAGCTCTGATTCCAGGCCCGTG  700

seq1  G-TTTGGACCGTGAATGCTGTCTTTTAAAATGCGGATTTCTCTGAAAAGC  749
      | |||||||||||||||||||||||||||||||||||||||||||||  |
seq2  GTTTTGGACCGTGAATGCTGTCTTTTAAAATGCGGATTTCTCTGAAAGCC  750

seq1  CTGCCTAAAAGGTTACATAGCTTGGGTTGGGTGATATGATCTTCCCCGCT  799
       ||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  TTGCCTAAAA-GTTACATAGCTTGGGTTGGGTG-TATGATCTTCCCCGCT  798

seq1  GCTGGTAAGGGATTTTTCTTCCCTTTAGAATTAGCTGCTGTGAAAATTTC  849
      |||||||||||||||||||||||||||||||| ||||||||  ||| |||
seq2  GCTGGTAAGGGATTTTTCTTCCCTTTAGAATT-GCTGCTGT--AAAATTC  845

seq1  ACCCTGGAAACGGGAAGAGGTATCAGCTGGTTCCGACTCTCACTGCCTTT  899
      ||||||| |||||| |||||||| | ||||||||||||||||||||||||
seq2  ACCCTGGGAACGGGGAGAGGTAT-AACTGGTTCCGACTCTCACTGCCTTT  894

seq1  GCCTGGTATCCAGGGAGGGGTGGGCT  925
      |||||||||||| |||||||||||||
seq2  GCCTGGTATCCAAGGAGGGGTGGGCT  920