BAC Information

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BAC

Clone NameB6Ng01-101L09
Chromosome2 (Build37)
Map Location 84,160,442 - 84,161,642
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725
Downstream geneCalcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101L09.bB6Ng01-101L09.g
ACCDH910809DH910810
length1,1801,099
definitionDH910809|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L09, 5' end.DH910810|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgaaaactacaattcaaactccaggagtaaatttacaacatgg
tttatagaagcagatgcagctatttaaaaagctgtggaattaaattcggt
ttcatctctcttaattacaaaatgaaatggtttatgttccaactggagac
catttcaaaatccctcagttgacccagaaacaacccctcccttggatcaa
aattaacatgctagtgtccaaaagtcttgtaaacatttacctcagcttac
gacttagagaggcagaggaagaaaacagaatcagcagcgaaggcatagtc
ccttttgtctccttttgtctcatgtggtgcatgggcactgcttgtgcatg
tgtggccctgagcctccatctactgcgctccaagaactgcatgagctgtg
tgcatctggctgcatatccaggctacaaaaggaaatatatccaacgaaca
aaggattcattgcagcccaagaacccagagagtccactttctttttcttt
gctttccttcattttttccattatgcattttgctgttatcattactacta
ttgttgttgttgttattttactacaaaataaagtgcttaatgatccatgt
ccatatgcccagggcagttttgtagattgcagtttctttgtgttttaaca
catattccataaattcaggctaaccatattattctagtttgtttaagaat
ttatatgtgctttctttcagcagtggagtcaattctggctaagcattttg
taattctagcattagatccatgggaaagagaaatggagagagggcatgcc
tttttgtttctgcatgcctgttctcagctctggcattgctttgacttggt
gtttctttcctgtgatgaaaagtgatcagaatcaaggaaacatgtctccc
tagagcttaaacgtgaactgcaagcatatcctagaccaccgggactccaa
atacttcaccccagtgggcctttgatcatagaggatatgtagattatgtc
ttctatgaaccccctcttagttttaaggactactgagatgaacaagggac
tttccatggcagagggtagcttatctcaactagcaattatgtacaggctt
caagagttttgctctcaaattctggatttgaaactatttctaggaaggta
aagtgattgagatggtaaataagaacttat
gaattcaaccaagtggaaacaagaagaaccattcaaagaattaaccaaac
gaggagttggttctttgagaaaatcaacaagatagataaacccttagcta
gactcactagagggcacagggacaaaatcctaattaacaaaatcagaaat
gaaaagggagacataacaacagatcctgaagaaatcaaaaacaccatcag
atccttctacaaaaggctatactcaacaaaactggaaaacctagacgaaa
tggacaaatttctggacagataccaggtaccaaagttgaatcaggatcaa
gttgaccttctaaacagtcccatatcccctaaagaaatagaagcagttat
taatagtctcccagccaaaaaaagcccaggaccagacgggtttagtgcag
agttctatcagaccttcaaagaagatctaactccagttctgcacaaactt
tttcacaagatagaagtagaaggtactctacccaactcattttatgaagc
cactattactctgatacctaaaccacagaaagatccaacaaagatagaga
acttcagaccaatttctcttatgaacatcgatgcaaaaatccttaataaa
attctcgctaaccgaatccaagaacacattaaagcaatcatccatcctga
ccaagtaggttttattccagggatgcagggatggtttaatatacggaaat
ccatcaatgtaatccatttatattaaacaaactcaaagacaaaaaccaca
tgatcatctcgttagatgcagaaaaagcatttgacaagatccaacaccca
ttcatgataaaagttctggaaagatcaggcattcaaggccaatacctaaa
catgataaaagcaatctacagcaaaccaggagccacatcaaagtaaatgg
agagaagcttgaagcattcccactaaaatcagggacttagacaaagctgc
ccactttctcctaccttttcaacttagtacttgagtattagcctgagcaa
ttcgacaccaaaggagatcaggatacaaatgaaagaggagtcaaatacac
tctgctatgaattgatagtaatattgtgacctttaaattccaccagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84160442_84161642
seq2: B6Ng01-101L09.b_46_1225 (reverse)

seq1  ATAAGTTCTTATTTTCCCATCTTCAAATCACTTTAACATCCTAGAAAATT  50
      ||||||||||| ||| ||||||   |||||||||| | |||||||||  |
seq2  ATAAGTTCTTA-TTTACCATCT--CAATCACTTTACCTTCCTAGAAA--T  45

seq1  AGTTTCAAATTCAGAATTTTAAGAAAGCAAAAACTCCTTGAAGGCCTTGT  100
      |||||||||| ||||||||   || ||| |||||| |||||||  | |||
seq2  AGTTTCAAATCCAGAATTT---GAGAGC-AAAACT-CTTGAAG--CCTGT  88

seq1  ACATAATATGCTAGTTTGAGATAAGCTACCCTCTGGCCATTGGAAAGTCC  150
      ||||||| |||||| ||||||||||||||||||| |||| ||||||||||
seq2  ACATAAT-TGCTAG-TTGAGATAAGCTACCCTCT-GCCA-TGGAAAGTCC  134

seq1  CTTTGTTCATTCTCAGGTTAGTCCTAAAAACTAAGGAGGGGGTTCATAGA  200
      | ||||||| ||||||  ||||||| |||||||| |||||||||||||||
seq2  C-TTGTTCA-TCTCAG--TAGTCCTTAAAACTAA-GAGGGGGTTCATAGA  179

seq1  AGACATAAAATCTTACATTATACCTCTATGATCAAAGG-CCACTGGGGTG  249
      ||||||  |||| |||| ||| |||||||||||||||| |||||||||||
seq2  AGACAT--AATC-TACA-TAT-CCTCTATGATCAAAGGCCCACTGGGGTG  224

seq1  AAGTATTTGGAGTCCCGGTGGTCTAGGATATGCTTGCAGTTCACGTTTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTGGAGTCCCGGTGGTCTAGGATATGCTTGCAGTTCACGTTTAA  274

seq1  GCTCTAGGGAGACATGTTTCCTTGATTCTGATCACTTTTCATCACAGG-A  348
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTCTAGGGAGACATGTTTCCTTGATTCTGATCACTTTTCATCACAGGAA  324

seq1  AGAAACACCAAGTCAAAGCAATGCCAGAGCTGAGAACAGGCATGCAGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACCAAGTCAAAGCAATGCCAGAGCTGAGAACAGGCATGCAGAAA  374

seq1  C-AAAAGGCATGCCCTCTCTCCATTTCTC-TTCCCATGGATCTAATGCTA  446
      | ||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAAAAAGGCATGCCCTCTCTCCATTTCTCTTTCCCATGGATCTAATGCTA  424

seq1  GAATTAC-AAATGCTTAGCCAGAATTGACTCCACTGCTGAAAGAAAGCAC  495
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACAAAATGCTTAGCCAGAATTGACTCCACTGCTGAAAGAAAGCAC  474

seq1  ATATAAATTCTTAAACAAACTAGAATAATATGGTTAGCCTGAATTTATGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATTCTTAAACAAACTAGAATAATATGGTTAGCCTGAATTTATGG  524

seq1  AATATGTGTTAAAACACAAAGAAACTGCAATCTACAAAACTGCCCTGGGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTTAAAACACAAAGAAACTGCAATCTACAAAACTGCCCTGGGC  574

seq1  ATATGGACATGGATCATTAAGCACTTTATTTTGTAGTAAAATAACAACAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGACATGGATCATTAAGCACTTTATTTTGTAGTAAAATAACAACAA  624

seq1  CAACAATAGTAGTAATGATAACAGCAAAATGCATAATGGAAAAAATGAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATAGTAGTAATGATAACAGCAAAATGCATAATGGAAAAAATGAAG  674

seq1  GAAAGCAAAGAAAAAGAAAGTGGACTCTCTGGGTTCTTGGGCTGCAATGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAAGAAAAAGAAAGTGGACTCTCTGGGTTCTTGGGCTGCAATGA  724

seq1  ATCCTTTGTTCGTTGGATATATTTCCTTTTGTAGCCTGGATATGCAGCCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGTTCGTTGGATATATTTCCTTTTGTAGCCTGGATATGCAGCCA  774

seq1  GATGCACACAGCTCATGCAGTTCTTGGAGCGCAGTAGATGGAGGCTCAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACACAGCTCATGCAGTTCTTGGAGCGCAGTAGATGGAGGCTCAGG  824

seq1  GCCACACATGCACAAGCAGTGCCCATGCACCACATGAGACAAAAGGAGAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACATGCACAAGCAGTGCCCATGCACCACATGAGACAAAAGGAGAC  874

seq1  AAAAGGGACTATGCCTTCGCTGCTGATTCTGTTTTCTTCCTCTGCCTCTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGACTATGCCTTCGCTGCTGATTCTGTTTTCTTCCTCTGCCTCTC  924

seq1  TAAGTCGTAAGCTGAGGTAAATGTTTACAAGACTTTTGGACACTAGCATG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCGTAAGCTGAGGTAAATGTTTACAAGACTTTTGGACACTAGCATG  974

seq1  TTAATTTTGATCCAAGGGAGGGGTTGTTTCTGGGTCAACTGAGGGATTTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTGATCCAAGGGAGGGGTTGTTTCTGGGTCAACTGAGGGATTTT  1024

seq1  GAAATGGTCTCCAGTTGGAACATAAACCATTTCATTTTGTAATTAAGAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGTCTCCAGTTGGAACATAAACCATTTCATTTTGTAATTAAGAGA  1074

seq1  GATGAAACCGAATTTAATTCCACAGCTTTTTAAATAGCTGCATCTGCTTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAACCGAATTTAATTCCACAGCTTTTTAAATAGCTGCATCTGCTTC  1124

seq1  TATAAACCATGTTGTAAATTTACTCCTGGAGTTTGAATTGTAGTTTTCAT  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACCATGTTGTAAATTTACTCCTGGAGTTTGAATTGTAGTTTTCAT  1174

seq1  GAATTC  1201
      ||||||
seq2  GAATTC  1180