BAC Information

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BAC

Clone NameB6Ng01-101L14
Chromosome2 (Build37)
Map Location 38,659,310 - 38,797,552
singlet/doubletdoublet
Overlap geneNr6a1, Olfml2a
Upstream geneDennd1a, LOC100040947, Lhx2, Nek6, Psmb7, LOC674251, Nr5a1
Downstream geneLOC624652, LOC100041071, 1700123D08Rik, Rpl35, Arpc5l, Golga1, A930041I02Rik, LOC100042584, Ppp6c, Vmn2r-ps2, Ppia-ps2_560.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101L14.bB6Ng01-101L14.g
ACCDH910819DH910820
length642615
definitionDH910819|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L14, 5' end.DH910820|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,659,310 - 38,659,954)(38,796,938 - 38,797,552)
sequence
gaattcagggctggagagatggctcacccggtaagagcactgactgctct
tccaaaggtcctgagttcaattctcagcaaccacatggtggctcataacc
atctgtaatgggatctgacgccctcgtctggtgtgtctgaaggcagctac
agtgtacttatgtataataataaataaatcttagggccaaagcaagcagg
gactgagcgggtggaggagaccagagcaaatggagtcgaccgaaggtcct
aaaaattcaattccctacaaccaaatgaaggctcacaaccatctgtacag
ctacagcgtactcacatacataaaataaataaaatcttaaaaaaaatgaa
ttcatttaagaccatgaattccgaagaatttcttaagaaggtgtaattag
tgacaaatcaggcacacacaaaaaaaccaaaaaccaaacaacaacaaaaa
gtgagtcagatgtctgaatagctggagcttgactaagtttagagtactgt
ctcctttctcaaggccagttccaaagttcccagaccctccatgctgtccc
ttttttactactactactactactactactactactactactacttcttc
ttcctcttcctcttcctcttcctcttcctcctactcctcctc
gaattctaggccgatgtgggcaacagagtgtgtgaccttgactcaaaaaa
gcaagacagaacaaacaaaataataaagtgccccagtgtttataatatag
ctaggtgaaggcatatgaagtgaattgggtcatacccaggatggtgagtg
attcaaggggcactgacttaagctggctccactcaggaagtcttagtttt
ccaacctgcgacacagatgtcataggagagccaggcgaacagtgtcagtg
taccttgaggagctcaggtgcctgcttcttcagtttctccatcttccact
cgttctcacaggggttgagtgaggagggcggggcggtgcaggagcacctg
cagtcagccccggagctcactgtctccacagtgtagaagtcctctactcg
tgctcgcccacttcgcacccggctgcatgcatccttgctcagcggtcgca
tgatgcatttgcagcggcagtcagagccctctgaggtcatccgaacctgg
tccaggtcactgaatacctgcagagggggaacaagaggggctccatttgg
ccaatgccatgaggacagtggtacaagtgtgtgggtgtgtcagaatccag
tctgctggtctctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_38659310_38659954
seq2: B6Ng01-101L14.b_47_688

seq1  GAATTCAGGGCTGGAGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCT  50
      |||||||||||||||||||||||||| | |||||||||||||||||||||
seq2  GAATTCAGGGCTGGAGAGATGGCTCACCCGGTAAGAGCACTGACTGCTCT  50

seq1  TCCAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCATAACC  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCCAAAGGTCCTGAGTTCAATTCTCAGCAACCACATGGTGGCTCATAACC  100

seq1  ATCTGTAATGGGATCTGACGCCCTCGTCTGGTGTGTCTGAAGGCAGCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAATGGGATCTGACGCCCTCGTCTGGTGTGTCTGAAGGCAGCTAC  150

seq1  AGTGTACTTATGTATAATAATAAATAAATCTTAGGGCCAAAGCAAGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTTATGTATAATAATAAATAAATCTTAGGGCCAAAGCAAGCAGG  200

seq1  GACTGAGCGGGTGGAGGAGACCAGAGCAAATGGAGTCGACCGAAGGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGCGGGTGGAGGAGACCAGAGCAAATGGAGTCGACCGAAGGTCCT  250

seq1  AAAAATTCAATTCCCTACAACCAAATGAAGGCTCACAACCATCTGTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCAATTCCCTACAACCAAATGAAGGCTCACAACCATCTGTACAG  300

seq1  CTACAGCGTACTCACATACATAAAATAAATAAAATCTTAAAAAAAATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCGTACTCACATACATAAAATAAATAAAATCTTAAAAAAAATGAA  350

seq1  TTCATTTAAGACCATGAATTCAGAAGAATTTCTTAAGAAGGTGTAATTAG  400
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTCATTTAAGACCATGAATTCCGAAGAATTTCTTAAGAAGGTGTAATTAG  400

seq1  TGACAAATCAGGCACACACAAAAAAACCAAAAACCAAACAACAACAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATCAGGCACACACAAAAAAACCAAAAACCAAACAACAACAAAAA  450

seq1  GTGAGTCAGATGTCTGAATAGCTGGAGCTTGACTAAGTTTAGAGTACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCAGATGTCTGAATAGCTGGAGCTTGACTAAGTTTAGAGTACTGT  500

seq1  CTCCTTTCTCAAGGCCAGTTCCAAAGTTCCCAGACCCTCCATGCTGTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCTCAAGGCCAGTTCCAAAGTTCCCAGACCCTCCATGCTGTCCC  550

seq1  TTTTTTACTACTACTACTACTACTACTACTACTACTACTACTACTACTTC  600
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTT---TACTACTACTACTACTACTACTACTACTACTACTACTACTTC  597

seq1  TTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTC  645
      ||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCCTACTCCTCCTC  642

seq1: chr2_38796938_38797552
seq2: B6Ng01-101L14.g_70_684 (reverse)

seq1  CCAGAGACCAGCAGGCTGGATTCTGACACACCCACACACTTGTACCACTG  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCAGAGACCAGCAGACTGGATTCTGACACACCCACACACTTGTACCACTG  50

seq1  TCCTCATGGCATTGGCCAAATGGAGCCCCTCTTGTTCCCCCTCTGCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGGCATTGGCCAAATGGAGCCCCTCTTGTTCCCCCTCTGCAGGT  100

seq1  ATTCAGTGACCTGGACCAGGTTCGGATGACCTCAGAGGGCTCTGACTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGACCTGGACCAGGTTCGGATGACCTCAGAGGGCTCTGACTGCC  150

seq1  GCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTG  200

seq1  CGAAGTGGGCGAGCACGAGTAGAGGACTTCTACACTGTGGAGACAGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGTGGGCGAGCACGAGTAGAGGACTTCTACACTGTGGAGACAGTGAG  250

seq1  CTCCGGGGCTGACTGCAGGTGCTCCTGCACCGCCCCGCCCTCCTCACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGGGCTGACTGCAGGTGCTCCTGCACCGCCCCGCCCTCCTCACTCA  300

seq1  ACCCCTGTGAGAACGAGTGGAAGATGGAGAAACTGAAGAAGCAGGCACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGTGAGAACGAGTGGAAGATGGAGAAACTGAAGAAGCAGGCACCT  350

seq1  GAGCTCCTCAAGGTACACTGACACTGTTCGCCTGGCTCTCCTATGACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTCAAGGTACACTGACACTGTTCGCCTGGCTCTCCTATGACATC  400

seq1  TGTGTCGCAGGTTGGAAAACTAAGACTTCCTGAGTGGAGCCAGCTTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCGCAGGTTGGAAAACTAAGACTTCCTGAGTGGAGCCAGCTTAAGT  450

seq1  CAGTGCCCCTTGAATCACTCACCATCCTGGGTATGACCCAATTCACTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCCCTTGAATCACTCACCATCCTGGGTATGACCCAATTCACTTCA  500

seq1  TATGCCTTCACCTAGCTATATTATAAACACTGGGGCACTTTATTATTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTCACCTAGCTATATTATAAACACTGGGGCACTTTATTATTTTG  550

seq1  TTTGTTCTGTCTTGCTTTTTTGAGTCAAGGTCACACACTCTGTTGCCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTGTCTTGCTTTTTTGAGTCAAGGTCACACACTCTGTTGCCCAC  600

seq1  ATCGGCCTGGAATTC  615
      |||||||| ||||||
seq2  ATCGGCCTAGAATTC  615