BAC Information

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BAC

Clone NameB6Ng01-102A10
Chromosome2 (Build37)
Map Location 32,044,555 - 32,221,778
singlet/doubletdoublet
Overlap gene5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1
Upstream geneGpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1, Fubp3, LOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3
Downstream gene1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102A10.bB6Ng01-102A10.g
ACCDH911035DH911036
length521606
definitionDH911035|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A10, 5' end.DH911036|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,044,555 - 32,045,081)(32,221,173 - 32,221,778)
sequence
cgtgctgcatgtaggcaagtagtgtgtgtgcatatgtgtgcatgtgaagg
tcagaggatggttttgcttgtcttccctcatgaatggtaaacctcatttt
ttgcaacaagtcctctggcttgaagctcactgtcttaaattactttctgt
tgctgtgacataacactgtgaccaaaagtaacttggagaggaaacgttta
ttttagctcacagcccatcatgagtagaaatctgtacaggaactccaggc
tggactcctatctggaggcaggaactgatggggaagtcacagagggatgc
tgcttactggctcactcccctggtgattcagtttgcttttttatatatga
tctgcccagggagaacactgcctctggttggctgggccccaaacatcaat
cagtaaccaagagaatgccccacagaggtgcctgtaatcgtatggaggca
tttcctaattacgacttcctcttctgagtataagtgtatgtcatggtgct
tggtactggtgtgtgtgtgtg
gaattcaagtccagactacctctggcaccttgagtaagccagttctccct
cccctcgtctgtcaaatgaagattcaaagtcatgaattagtgtatctgat
aaaaaggtacgacaaagacacacacaccgtcccagagagccatccagctc
ccagaaacagtaaggcggaagatgggaagccctcaagcagagacggacaa
aggacagagatggacaagtcacaaaaatgacatgtgaatgcttggtatat
gttttagccgcactagcacgtggaaatgggaatgaagacacaacgcagcg
ttagcctttgcaaaccaacttagtaaacaatccgcgcgcgcacacacaca
gtcacagaggcataggtaaaaaagcatggagtacccagtgttgccgtagg
catggtgaggctggcaccgtcatacgtggctggtggcattgcaaactggt
ccagtccttaggaaagtaatttggtaatacttatcaaaagccatcagaca
tccatccccgactcagtcactcagtgctggggatctactgtgagaagagt
ctcagatgtcagttcatctcagtggggtttaggatagagaagaggagggg
gggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32044555_32045081
seq2: B6Ng01-102A10.b_46_572

seq1  GAATTCCGTGCTGCATGTAGGCAAGTAGTGTGTGTGCATATGTGTGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGTGCTGCATGTAGGCAAGTAGTGTGTGTGCATATGTGTGCATG  50

seq1  TGAAGGTCAGAGGATGGTTTTGCTTGTCTTCCCTCATGAATGGTAAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCAGAGGATGGTTTTGCTTGTCTTCCCTCATGAATGGTAAACCT  100

seq1  CATTTTTTGCAACAAGTCCTCTGGCTTGAAGCTCACTGTCTTAAATTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTGCAACAAGTCCTCTGGCTTGAAGCTCACTGTCTTAAATTACT  150

seq1  TTCTGTTGCTGTGACATAACACTGTGACCAAAAGTAACTTGGAGAGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTGCTGTGACATAACACTGTGACCAAAAGTAACTTGGAGAGGAAA  200

seq1  CGTTTATTTTAGCTCACAGCCCATCATGAGTAGAAATCTGTACAGGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTATTTTAGCTCACAGCCCATCATGAGTAGAAATCTGTACAGGAACT  250

seq1  CCAGGCTGGACTCCTATCTGGAGGCAGGAACTGATGGGGAAGTCACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGACTCCTATCTGGAGGCAGGAACTGATGGGGAAGTCACAGAG  300

seq1  GGATGCTGCTTACTGGCTCACTCCCCTGGTGATTCAGTTTGCTTTTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGCTTACTGGCTCACTCCCCTGGTGATTCAGTTTGCTTTTTTAT  350

seq1  ATATGATCTGCCCAGGGAGAACACTGCCTCTGGTTGGCTGGGCCCCAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATCTGCCCAGGGAGAACACTGCCTCTGGTTGGCTGGGCCCCAAAC  400

seq1  ATCAATCAGTAACCAAGAGAATGCCCCACAGAGGTGCCTGTAATCGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCAGTAACCAAGAGAATGCCCCACAGAGGTGCCTGTAATCGTATG  450

seq1  GAGGCATTTCCTAATTACGACTTCCTCTTCTGAGTATAAGTGTATGTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATTTCCTAATTACGACTTCCTCTTCTGAGTATAAGTGTATGTCAT  500

seq1  GGTGCTTGGTACTGGTGTGTGTGTGTG  527
      |||||||||||||||||||||||||||
seq2  GGTGCTTGGTACTGGTGTGTGTGTGTG  527

seq1: chr2_32221173_32221778
seq2: B6Ng01-102A10.g_68_673 (reverse)

seq1  CCCCCCCCCCTCCTCTTCTCTATCCTAAACCCCACTGAGATGAACTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCTCCTCTTCTCTATCCTAAACCCCACTGAGATGAACTGACA  50

seq1  TCTGAGACTCTTCTCACAGTAGATCCCCAGCACTGAGTGACTGAGTCGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACTCTTCTCACAGTAGATCCCCAGCACTGAGTGACTGAGTCGGG  100

seq1  GATGGATGTCTGATGGCTTTTGATAAGTATTACCAAATTACTTTCCTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGTCTGATGGCTTTTGATAAGTATTACCAAATTACTTTCCTAAG  150

seq1  GACTGGACCAGTTTGCAATGCCACCAGCCACGTATGACGGTGCCAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGACCAGTTTGCAATGCCACCAGCCACGTATGACGGTGCCAGCCTC  200

seq1  ACCATGCCTACGGCAACACTGGGTACTCCATGCTTTTTTACCTATGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCCTACGGCAACACTGGGTACTCCATGCTTTTTTACCTATGCCTC  250

seq1  TGTGACTGTGTGTGTGCGCGCGCGGATTGTTTACTAAGTTGGTTTGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTGTGTGTGTGCGCGCGCGGATTGTTTACTAAGTTGGTTTGCAAA  300

seq1  GGCTAACGCTGCGTTGTGTCTTCATTCCCATTTCCACGTGCTAGTGCGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAACGCTGCGTTGTGTCTTCATTCCCATTTCCACGTGCTAGTGCGGC  350

seq1  TAAAACATATACCAAGCATTCACATGTCATTTTTGTGACTTGTCCATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATATACCAAGCATTCACATGTCATTTTTGTGACTTGTCCATCTC  400

seq1  TGTCCTTTGTCCGTCTCTGCTTGAGGGCTTCCCATCTTCCGCCTTACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTGTCCGTCTCTGCTTGAGGGCTTCCCATCTTCCGCCTTACTGT  450

seq1  TTCTGGGAGCTGGATGGCTCTCTGGGACGGTGTGTGTGTCTTTGTCGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGAGCTGGATGGCTCTCTGGGACGGTGTGTGTGTCTTTGTCGTAC  500

seq1  CTTTTTATCAGATACACTAATTCATGACTTTGAATCTTCATTTGACAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATCAGATACACTAATTCATGACTTTGAATCTTCATTTGACAGAC  550

seq1  GAGGGGAGGGAGAACTGGCTTACTCAAGGTGCCAGAGGTAGTCTGGACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGGGAGAACTGGCTTACTCAAGGTGCCAGAGGTAGTCTGGACTT  600

seq1  GAATTC  606
      ||||||
seq2  GAATTC  606