BAC Information

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BAC

Clone NameB6Ng01-102J01
Chromosome2 (Build37)
Map Location 127,704,345 - 127,705,450
singlet/doubletsinglet
Overlap geneAcoxl
Upstream gene2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1
Downstream geneBcl2l11, LOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102J01.b
ACCDH911423
length1,101
definitionDH911423|Mus musculus domesticus DNA, BAC clone: B6Ng01-102J01, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaagcagactttctgcagttgtcagtattgtcaacatgtggtg
tgacttcaaaagcactggcctgtccctctgctctcaccgcacttgacagg
ggccacactcagaagcaaggttgcctgtactaacagtgggctgaggctat
tcccatactgtccagtgcgtctcccctaccccttcctctctttcttctct
cttttatccttaactcctacaatactttctttagctggcttcgccttgga
aagctggtctcactgagtgctatgagatgtacctcccctatcccattcat
agattgaagtcctaagcccatatctgtcatatgaccttgtttagaaatag
aggcgttacagaggcaaccaagttaaaatgagatcattaaggtggactct
attataaatgatggcaatccttataagaaggagaaacctggaggcagatg
tgtgcacagggagactacatgctcatgtgcaggtagcattcataagtgga
ggtaagagtcttggactagaaccttccattgcccccatcagaaggaatta
acatctcctggcagctccatcatctcggacctctatcctccaaaactgtg
aggacccacttgtattacaaatctcctgggtcagttacaaacattagtct
ggaggtgaagaggcaccagagagctacagcctgccctaagaccaagaaga
gagaagttgaagctgtgtcctttgtagaggagataacttcaatgtatact
ccctggaaagacccccccccccccccagtatgctttcctgaagatgaagg
ggattatattctccttcgagaacagacaacaggtacaaataaacacagag
gagggtcacttgacgactcaccctctttgtgcatcatgtcaatagctgtc
actcctgggtacaagtttccattttcatccctgatagggacaattaaaca
gtgggggcctagggaagacaaacagacagacgcttattaggctcaccgtt
tttcactgttgtgagaaagagtctcccttatgtaaccctagatgcctaga
cttcaccacatagcaaggtggctctaattcagtggaccctcctggctcta
c
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_127704345_127705450
seq2: B6Ng01-102J01.b_46_1146 (reverse)

seq1  GTAGAGGCAGGAGGGTCAACTTGAATTAGAGGCCACCTTGGCTTATGTGG  50
      |||||| |||||||||| || ||||||||| |||||||||   |||||||
seq2  GTAGAGCCAGGAGGGTCCAC-TGAATTAGA-GCCACCTTG--CTATGTGG  46

seq1  TGAGTTCTAGGCCATCTAGGGTTACAT-AGTGAGACTCTGTCTCAACAAC  99
      |||  |||||| ||||||||||||||| || |||||||| |||| |||||
seq2  TGAAGTCTAGG-CATCTAGGGTTACATAAGGGAGACTCTTTCTC-ACAAC  94

seq1  AGTGAAAAACGGTGAGCCTAATAAGCGTCTGTCTGTTTGTCTTCCTTAGG  149
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGTGAAAAACGGTGAGCCTAATAAGCGTCTGTCTGTTTGTCTTCCCTAGG  144

seq1  GCCCCACTGTTTTATTGTCCCTATCAGGGATGAAAATGGAAACTTGTACC  199
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCCCCACTGTTTAATTGTCCCTATCAGGGATGAAAATGGAAACTTGTACC  194

seq1  CAGGAGTGACAGCTATTGACATGATGCACAAAGAGGGTGAGTCGTCAAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTGACAGCTATTGACATGATGCACAAAGAGGGTGAGTCGTCAAGT  244

seq1  GACCCTCCTCTGTGTTTATTTGTACCTGTTGTCTGTTCTCGAAGGAGAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCCTCTGTGTTTATTTGTACCTGTTGTCTGTTCTCGAAGGAGAAT  294

seq1  ATAATCCCCTTCATCTTCAGGAAAGCATACTGGGGGGGGGGGGGGGTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCCCTTCATCTTCAGGAAAGCATACTGGGGGGGGGGGGGGGTCTT  344

seq1  TCCAGGGAGTATACATTGAAGTTATCTCCTCTACAAAGGACACAGCTTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGAGTATACATTGAAGTTATCTCCTCTACAAAGGACACAGCTTCA  394

seq1  ACTTCTCTCTTCTTGGTCTTAGGGCAGGCTGTAGCTCTCTGGTGCCTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTCTTCTTGGTCTTAGGGCAGGCTGTAGCTCTCTGGTGCCTCTT  444

seq1  CACCTCCAGACTAATGTTTGTAACTGACCCAGGAGATTTGTAATACAAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCAGACTAATGTTTGTAACTGACCCAGGAGATTTGTAATACAAGT  494

seq1  GGGTCCTCACAGTTTTGGAGGATAGAGGTCCGAGATGATGGAGCTGCCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTCACAGTTTTGGAGGATAGAGGTCCGAGATGATGGAGCTGCCAG  544

seq1  GAGATGTTAATTCCTTCTGATGGGGGCAATGGAAGGTTCTAGTCCAAGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTTAATTCCTTCTGATGGGGGCAATGGAAGGTTCTAGTCCAAGAC  594

seq1  TCTTACCTCCACTTATGAATGCTACCTGCACATGAGCATGTAGTCTCCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTCCACTTATGAATGCTACCTGCACATGAGCATGTAGTCTCCCT  644

seq1  GTGCACACATCTGCCTCCAGGTTTCTCCTTCTTATAAGGATTGCCATCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACATCTGCCTCCAGGTTTCTCCTTCTTATAAGGATTGCCATCAT  694

seq1  TTATAATAGAGTCCACCTTAATGATCTCATTTTAACTTGGTTGCCTCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATAGAGTCCACCTTAATGATCTCATTTTAACTTGGTTGCCTCTGT  744

seq1  AACGCCTCTATTTCTAAACAAGGTCATATGACAGATATGGGCTTAGGACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCTCTATTTCTAAACAAGGTCATATGACAGATATGGGCTTAGGACT  794

seq1  TCAATCTATGAATGGGATAGGGGAGGTACATCTCATAGCACTCAGTGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTATGAATGGGATAGGGGAGGTACATCTCATAGCACTCAGTGAGA  844

seq1  CCAGCTTTCCAAGGCGAAGCCAGCTAAAGAAAGTATTGTAGGAGTTAAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTCCAAGGCGAAGCCAGCTAAAGAAAGTATTGTAGGAGTTAAGG  894

seq1  ATAAAAGAGAGAAGAAAGAGAGGAAGGGGTAGGGGAGACGCACTGGACAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAGAGAAGAAAGAGAGGAAGGGGTAGGGGAGACGCACTGGACAG  944

seq1  TATGGGAATAGCCTCAGCCCACTGTTAGTACAGGCAACCTTGCTTCTGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGAATAGCCTCAGCCCACTGTTAGTACAGGCAACCTTGCTTCTGAG  994

seq1  TGTGGCCCCTGTCAAGTGCGGTGAGAGCAGAGGGACAGGCCAGTGCTTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCCCTGTCAAGTGCGGTGAGAGCAGAGGGACAGGCCAGTGCTTTT  1044

seq1  GAAGTCACACCACATGTTGACAATACTGACAACTGCAGAAAGTCTGCTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCACACCACATGTTGACAATACTGACAACTGCAGAAAGTCTGCTTT  1094

seq1  GGAATTC  1106
      |||||||
seq2  GGAATTC  1101