BAC Information

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BAC

Clone NameB6Ng01-102K22
Chromosome2 (Build37)
Map Location 25,773,791 - 25,865,081
singlet/doubletdoublet
Overlap geneKcnt1, Camsap1, LOC100040100, LOC665199, Ubadc1
Upstream geneArrdc1, Zmynd19, Wdr85, Mrpl41, Pnpla7, Nelf, Entpd8, Noxa1, Nrarp, A830007P12Rik, A730008L03Rik, 4933433C11Rik, BC061039, Tubb2c, Slc34a3, Gm757, 2310002J15Rik, Rnf208, LOC100039232, Ndor1, C730025P13Rik, C430004E15Rik, Ssna1, Anapc2, 4930571C24Rik, BC004853, Grin1, Man1b1, Dpp7, Uap1l1, 2010317E24Rik, Entpd2, Npdc1, Fut7, Abca2, Clic3, BC029214, Ptgds, EG665070, Lcn12, C8g, Fbxw5, Traf2, Edf1, Mamdc4, Phpt1, Gm996, LOC100039887, B230208H17Rik, 4921530D09Rik, Tmem141, Fcna, Lcn8, Lcn5, LOC620709, Lcn10, Lcn13, Bmyc, LOC383678, Lcn3, Lcn11, LOC620858, Glt6d1, Lcn9, Sohlh1
Downstream geneBtbd14a, C330006A16Rik, Lhx3, Qscn6l1, C030048H21Rik, 4932418E24Rik, Gpsm1, D2Bwg1335e, Card9, Snapc4, Sdccag3, Pmpca, Inpp5e, AU024582, Notch1, Egfl7, Agpat2, B230317C12Rik, 5730588L14Rik, LOC100039446, Lcn4, LOC669582, Abo, Surf6, Surf5-ps, Surf5, Rpl7a, Surf1, Surf2, Surf4, Gm711, Rexo4, Adamts13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102K22.bB6Ng01-102K22.g
ACCDH911501DH911502
length1,0881,043
definitionDH911501|Mus musculus domesticus DNA, BAC clone: B6Ng01-102K22, 5' end.DH911502|Mus musculus domesticus DNA, BAC clone: B6Ng01-102K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,773,791 - 25,774,897)(25,864,052 - 25,865,081)
sequence
gaattctccatagcttccatcgccttcatctctaggcctggaagactgtc
ttttgcagtattatccctgtctcccactgtctttggacaccaccgattct
cccagtcctcataccctactggtcttaagggctctcatgaaacacttgtt
cccaatggacagggtctgtcccaacccaggaagaggcagaatttacacac
agcaacagaatgttcaaggtatacaaaattagcaagaagccttttatttt
ttttcattcctaactacttggaatcgtaactcaaaatagtgtattgggtg
ctgtagcctgtgctaagtgaaacactggcagccgtgtagtgttgtgaggg
gcagctgggcctgggagctgttctgctgtgggagctgggagcctgggaag
catgtgtttgctgcaggttctaggctatctcagtaacatgtatttacaga
tgggcagtgacagacagacaggaatatctaagcttaagtacttagtgcag
aaaagcaggcagggcagagacagagaccaaggcaagggctaaaacacaga
agttaacaccaatccagctacacgtcggccacgccaactgagggtagctt
taggtgggcaatgataaaacagacctacaatggacagaaagaaggctctg
agacatgacccatcccccaagtccctctcactccaccacatgtccccatg
ctccaaggcatctctttgggggatttcaagacagatttctgagaggatgt
gactggtctgcatttgccagaacccccaggctatgctcagtcccaccatg
ctcttaaccagccattctgacccctcatcttaggccccacagagtcacac
accacacaccacaacaccctcaaaaggacctttctatctgagtcacagtt
ttccctgttgggttagtttcattagaagacagtgtagaatacaaagacaa
attgcatttgagtgacagaacagtgttgcggtggggaagctacagtttta
gatacttcctactaattcagttatttgtctcccttctagagcagttctag
attggttctgggtgtctatgctcactgtgcgcagcaga
gaattcacagagatctgcctgcctctgccttccagctctgagattaaagg
taaggcccaatatgcccttgtagatttggagggctatgtctgggatagtg
ttgcagatttaagcaagtttgttggacattctgagaaataatctttttgg
tttgtttgatttttgagacaggtttttactgtagaattaaggttggcctc
aagctcccagcagacttcttttctcagcctcgcaagagcagggattacag
gtgtgcatcactgtaccgggcatgatctctttctttatcctactgcagtt
ccagacagaactccggaagatcctcgtgtctctcattgaggtggcacaga
agctgttagcactgaatcccgatgcagttgaattgtttaagaaggcaaat
ggtatgcgtgggtcctaggctgctcctaaaagtgtccccagccctcacac
tgaaagcaagttctgctttggttaatgggggagagggtttggtgtcagta
attgctaggtgaggtgagcctctactgatgaggctggggggcttcaaagg
actctggaatcccctcatggcaggccttgtctttctcctcagctatgctg
gatgaagatgaggatgagcgagtggatgagactgccttgcggcagctcac
agagatgggctttcctgagagcagagcctcaaaggcccttcggctgaacc
agtatgcttgctttcttcttgccctgggcttccctgtgattctcccttcc
aatctctgggagtcatactttttttttttaattttttattttatctgtgt
atatgtacatgttgtgtaatgggtgcccatagaagccagagaggaaagtt
gggatcttctggagctagaatttacagactgctgtgaactgcctgacaca
ggtgctaagaaccaaactcaggagctcttcatcttaatctaggagccagc
ttccccgatcccattgagtcatttctagttgggtgttctagtagaaggca
ccttatgctgtgcttcagaagtgctttccatatatgaatcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_25773791_25774897
seq2: B6Ng01-102K22.b_45_1132

seq1  GAATTCTCCATAGCTTCCATCGCCTTCATCTCTAGGCCTGGAAGACTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATAGCTTCCATCGCCTTCATCTCTAGGCCTGGAAGACTGTC  50

seq1  TTTTGCAGTATTATCCCTGTCTCCCACTGTCTTTGGACACCACCGATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAGTATTATCCCTGTCTCCCACTGTCTTTGGACACCACCGATTCT  100

seq1  CCCAGTCCTCATACCCTACTGGTCTTAAGGGCTCTCATGAAACACTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCTCATACCCTACTGGTCTTAAGGGCTCTCATGAAACACTTGTT  150

seq1  CCCAATGGACAGGGTCTGTCCCAACCCAGGAAGAGGCAGAATTTACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGGACAGGGTCTGTCCCAACCCAGGAAGAGGCAGAATTTACACAC  200

seq1  AGCAACAGAATGTTCAAGGTATACAAAATTAGCAAGAAGCCTTTTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGAATGTTCAAGGTATACAAAATTAGCAAGAAGCCTTTTATTTT  250

seq1  TTTTCATTCCTAACTACTTGGAATCGTAACTCAAAATAGTGTATTGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTCCTAACTACTTGGAATCGTAACTCAAAATAGTGTATTGGGTG  300

seq1  CTGTAGCCTGTGCTAAGTGAAACACTGGCAGCCGTGTAGTGTTGTGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCCTGTGCTAAGTGAAACACTGGCAGCCGTGTAGTGTTGTGAGGG  350

seq1  GCAGCTGGGCCTGGGAGCTGTTCTGCTGTGGGAGCTGGGAGCCTGGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGGCCTGGGAGCTGTTCTGCTGTGGGAGCTGGGAGCCTGGGAAG  400

seq1  CATGTGTTTGCTGCAGGTTCTAGGCTATCTCAGTAACATGTATTTACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTTGCTGCAGGTTCTAGGCTATCTCAGTAACATGTATTTACAGA  450

seq1  TGGGCAGTGACAGACAGACAGGAATATCTAAGCTTAAGTACTTAGTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGTGACAGACAGACAGGAATATCTAAGCTTAAGTACTTAGTGCAG  500

seq1  AAAAGCAGGCAGGGCAGAGACAGAGACCAAGGCAAGGGCTAAAACACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGGCAGGGCAGAGACAGAGACCAAGGCAAGGGCTAAAACACAGA  550

seq1  AGTTAACACCAATCCAGCTACACGTCGGCCACGCCAACTGAGGGTAGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACACCAATCCAGCTACACGTCGGCCACGCCAACTGAGGGTAGCTT  600

seq1  TAGGTGGGCAATGATAAAACAGACCTACAATGGACAGAAAGAAGGCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGGCAATGATAAAACAGACCTACAATGGACAGAAAGAAGGCTCTG  650

seq1  AGACATGACCCATCCCCCAAGTCCCTCTCACTCCACCACATGTCCCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGACCCATCCCCCAAGTCCCTCTCACTCCACCACATGTCCCCATG  700

seq1  CTCCAAGGCATCTCTTTGGGGGATTTCAAGACAGATTTCTGAGAGGATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGGCATCTCTTTGGGGGATTTCAAGACAGATTTCTGAGAGGATGT  750

seq1  GACTGGTCTGCATTTGCCAGAACCCCCAGGCTATGCTCAGTCCCACCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTCTGCATTTGCCAGAACCCCCAGGCTATGCTCAGTCCCACCATG  800

seq1  CTCTTAACCAGCCATTCTGACCCCTCATCTTAGGCCCCACAGAGTCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAACCAGCCATTCTGACCCCTCATCTTAGGCCCCACAGAGTCACAC  850

seq1  ACCACACACCACAACACCCTCAAAAGGACCTTTCTATCTGAGTCACAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACACCACAACACCCTCAAAAGGACCTTTCTATCTGAGTCACAGTT  900

seq1  TTCCCTGTTGGGTTAGTTTCATTAGGAAGACAGTGTAGAATACAAAGACA  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCCCTGTTGGGTTAGTTTCATTA-GAAGACAGTGTAGAATACAAAGACA  949

seq1  AATTGCATTTGAGTGACAAGAACAGTGTTGCGGTGGGGAAGCTAACAGTT  1000
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  AATTGCATTTGAGTGAC-AGAACAGTGTTGCGGTGGGGAAGCT-ACAGTT  997

seq1  TTAGATACTTCCTTACTAATTTCAGTTTATTTTGTCTTCCCTTCTAAGAG  1050
      |||||||||||| |||||| |||||||   |||||| |||||||| ||| 
seq2  TTAGATACTTCC-TACTAA-TTCAGTT--ATTTGTC-TCCCTTCT-AGA-  1040

seq1  GCAGGTTCCTTAAGAATGGGGTTCTGGGTGTCTAATGCTCACTGTGCGCA  1100
      ||| ||||    ||| |  |||||||||||||| ||||||||||||||| 
seq2  GCA-GTTC---TAGATT--GGTTCTGGGTGTCT-ATGCTCACTGTGCGC-  1082

seq1  AAGCAGA  1107
       ||||||
seq2  -AGCAGA  1088

seq1: chr2_25864052_25865081
seq2: B6Ng01-102K22.g_67_1109 (reverse)

seq1  AAAGA-TCATATAT-GAAAGCACTTCTGAAGCACAGCAATAAGGTGCC-T  47
      ||||| |||||||| |||||||||||||||||||||| |||||||||| |
seq2  AAAGATTCATATATGGAAAGCACTTCTGAAGCACAGC-ATAAGGTGCCTT  49

seq1  CTACTAGAACACCCAATTAGAAATGACTCAATGGGATCGGGG-AGCTGGC  96
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  CTACTAGAACACCCAACTAGAAATGACTCAATGGGATCGGGGAAGCTGGC  99

seq1  TCCTAGATTAAGATGAAGAGCTCCTGAGTTTGGTTCCTAGCACCTGTGTC  146
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCTAGATTAAGATGAAGAGCTCCTGAGTTTGGTTCTTAGCACCTGTGTC  149

seq1  AGGCAGTTCACAGCAGTCTGT-AATTCTAGCTCCAGAAGAT-CCAAC-TT  193
      ||||||||||||||||||||| ||||||||||||||||||| ||||| ||
seq2  AGGCAGTTCACAGCAGTCTGTAAATTCTAGCTCCAGAAGATCCCAACTTT  199

seq1  CCTCTCTGGCTTCTATGGGCACCCA-TACAC-ACATGTACATATACACAG  241
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  CCTCTCTGGCTTCTATGGGCACCCATTACACAACATGTACATATACACAG  249

seq1  AT-AAATAAAAA--TTAAAAAAAAAAGTATGACT-CCAGAGATTGGAA-G  286
      || |||||||||  | |||||||||||||||||| ||||||||||||| |
seq2  ATAAAATAAAAAATTAAAAAAAAAAAGTATGACTCCCAGAGATTGGAAGG  299

seq1  GAGAATCACAGGGAAGCCCAGGGCAAGAAGAAAGCAAGCATACTGGTTCA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCACAGGGAAGCCCAGGGCAAGAAGAAAGCAAGCATACTGGTTCA  349

seq1  GCCGAAGGGCCTTTGAGGCTCTGCTCTCAGGAAAGCCCATCTCTGTGAGC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAAGGGCCTTTGAGGCTCTGCTCTCAGGAAAGCCCATCTCTGTGAGC  399

seq1  TGCCGCAAGGCAGTCTCATCCACTCGCTCATCCTCATCTTCATCCAGCAT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCAAGGCAGTCTCATCCACTCGCTCATCCTCATCTTCATCCAGCAT  449

seq1  AGCTGAGGAGAAAGACAAGGCCTGCCATGAGGGGATTCCAGAGTCCTTTG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGAGAAAGACAAGGCCTGCCATGAGGGGATTCCAGAGTCCTTTG  499

seq1  AAGCCCCCCAGCCTCATCAGTAGAGGCTCACCTCACCTAGCAATTACTGA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCCCAGCCTCATCAGTAGAGGCTCACCTCACCTAGCAATTACTGA  549

seq1  CACCAAACCCTCTCCCCCATTAACCAAAGCAGAACTTGCTTTCAGTGTGA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAACCCTCTCCCCCATTAACCAAAGCAGAACTTGCTTTCAGTGTGA  599

seq1  GGGCTGGGGACACTTTTAGGAGCAGCCTAGGACCCACGCATACCATTTGC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGGGACACTTTTAGGAGCAGCCTAGGACCCACGCATACCATTTGC  649

seq1  CTTCTTAAACAATTCAACTGCATCGGGATTCAGTGCTAACAGCTTCTGTG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAAACAATTCAACTGCATCGGGATTCAGTGCTAACAGCTTCTGTG  699

seq1  CCACCTCAATGAGAGACACGAGGATCTTCCGGAGTTCTGTCTGGAACTGC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCAATGAGAGACACGAGGATCTTCCGGAGTTCTGTCTGGAACTGC  749

seq1  AGTAGGATAAAGAAAGAGATCATGCCCGGTACAGTGATGCACACCTGTAA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGATAAAGAAAGAGATCATGCCCGGTACAGTGATGCACACCTGTAA  799

seq1  TCCCTGCTCTTGCGAGGCTGAGAAAAGAAGTCTGCTGGGAGCTTGAGGCC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTCTTGCGAGGCTGAGAAAAGAAGTCTGCTGGGAGCTTGAGGCC  849

seq1  AACCTTAATTCTACAGTAAAAACCTGTCTCAAAAATCAAACAAACCAAAA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAATTCTACAGTAAAAACCTGTCTCAAAAATCAAACAAACCAAAA  899

seq1  AGATTATTTCTCAGAATGTCCAACAAACTTGCTTAAATCTGCAACACTAT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTTCTCAGAATGTCCAACAAACTTGCTTAAATCTGCAACACTAT  949

seq1  CCCAGACATAGCCCTCCAAATCTACAAGGGCATATTGGGCCTTACCTTTA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACATAGCCCTCCAAATCTACAAGGGCATATTGGGCCTTACCTTTA  999

seq1  ATCTCAGAGCTGGAAGGCAGAGGCAGGCAGATCTCTGTGAATTC  1030
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGAGCTGGAAGGCAGAGGCAGGCAGATCTCTGTGAATTC  1043