BAC Information

Click to search

BAC

Clone NameB6Ng01-102O10
Chromosome2 (Build37)
Map Location 142,439,609 - 142,440,843
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914
Downstream geneKif16b, Snrpb2, Otor, LOC668915, LOC668916, Pcsk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102O10.bB6Ng01-102O10.g
ACCDH911657DH911658
length1,2521,224
definitionDH911657|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O10, 5' end.DH911658|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgtataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcaaggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcggtcagttgatcatagggaacaccccatgag
gctataggtgcatgcttggcagcagatggcattgtaacagagtagaaacc
atagcatttgagcacttcttcatgtaacttgcttgtgctttcaggacctg
ctctggcccgatcacgttatataccactttcattgtgataaatagaactt
gtctgctgtgcacgttcactttatgaacttgcaagggtctgatagcaatc
cagctcatgaatggtgattcaggtcccatgaccttggtccattgtccgaa
ggttcagttcacactataggccaatacacggaccatagacgcgtccatat
ca
gaattcaaacaggaaacactttcaaaactatcaaccaacttgcattgtaa
acaaccagagaaaagtttctgattgatacagccccaatccagcatagttg
tgcattacatttcttccctgggaaagactctcccactccaaatgggaaag
agctaataggaggggccctggggcggggaaggcagaggagaaggatgtca
cactgaagacctggcttgaggtattcgatagggaactttctcagtggcat
cggtgtttcccataagagatgcacatgtggaccatacttgtagtagcaag
ctcttcagacaaggtgtccctcaggtacattcaagtccccagctctcaag
tgagcactgtgctctttggccaaaagtccttccataaaacaaaaccagat
ctctatgcataaggtcaccccagacaagcattagaaggtaagggaaaaaa
cagtttctaaatctaaatatgacttctctctacctgaaaaggacaattgt
ccaggatgtgaattaccttgcgcctgggggccatcatgctgcttttatat
tcattgaaaacaagcttaaaacacatactgaagacgttttgttaagacag
cacaccctccctttcctttccttggcttctagcttatgtttttaggagaa
gaactggtaagagtttagacatcaacccaagtgcaaattaaccaacaaca
aacttaatttcacaaactgttaatattcactgtgattatttcctctcaag
atagttctggcagctttgaaggaacagctgcagccctctctcctcgcttc
cctccctccctcttttccttccttcctccctttctacaagactgggaagg
aaggcaggactctcacgaatagcaagcctcacgcaattgtgtcctgagct
gttcccaggcacaactgtgagcagacacacatggcttcgattgtcactgc
acaggaatgtgtgacgctttcagcaaagtatagctttcagcactggggtg
gtttaaatgcagcttcctttatgtgccgtcgttcttctgggtttcccttc
tggagaactagttctttctttctggtgacctgccttcatgtagcaacaga
catcactccacaggtttttccttctttggccactggtaccttgttaccat
aatcctcactgaagccttgggagaatgtctggccatctctttgtaacacc
atcctccatatatatggggaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142439609_142440843
seq2: B6Ng01-102O10.g_66_1289

seq1  GAATTCAAACAGGAAACACTTTCAAAACTATCAACCAACTTGCATTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAGGAAACACTTTCAAAACTATCAACCAACTTGCATTGTAA  50

seq1  ACAACCAGAGAAAAGTTTCTGATTGATACAGCCCCAATCCAGCATAGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAGAGAAAAGTTTCTGATTGATACAGCCCCAATCCAGCATAGTTG  100

seq1  TGCATTACATTTCTTCCCTGGGAAAGACTCTCCCACTCCAAATGGGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTACATTTCTTCCCTGGGAAAGACTCTCCCACTCCAAATGGGAAAG  150

seq1  AGCTAATAGGAGGGGCCCTGGGGCGGGGAAGGCAGAGGAGAAGGATGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATAGGAGGGGCCCTGGGGCGGGGAAGGCAGAGGAGAAGGATGTCA  200

seq1  CACTGAAGACCTGGCTTGAGGTATTCGATAGGGAACTTTCTCAGTGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGACCTGGCTTGAGGTATTCGATAGGGAACTTTCTCAGTGGCAT  250

seq1  CGGTGTTTCCCATAAGAGATGCACATGTGGACCATACTTGTAGTAGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGTTTCCCATAAGAGATGCACATGTGGACCATACTTGTAGTAGCAAG  300

seq1  CTCTTCAGACAAGGTGTCCCTCAGGTACATTCAAGTCCCCAGCTCTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGACAAGGTGTCCCTCAGGTACATTCAAGTCCCCAGCTCTCAAG  350

seq1  TGAGCACTGTGCTCTTTGGCCAAAAGTCCTTCCATAAAACAAAACCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACTGTGCTCTTTGGCCAAAAGTCCTTCCATAAAACAAAACCAGAT  400

seq1  CTCTATGCATAAGGTCACCCCAGACAAGCATTAGAAGGTAAGGGAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGCATAAGGTCACCCCAGACAAGCATTAGAAGGTAAGGGAAAAAA  450

seq1  CAGTTTCTAAATCTAAATATGACTTCTCTCTACCTGAAAAGGACAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTAAATCTAAATATGACTTCTCTCTACCTGAAAAGGACAATTGT  500

seq1  CCAGGATGTGAATTACCTTGCGCCTGGGGGCCATCATGCTGCTTTTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATGTGAATTACCTTGCGCCTGGGGGCCATCATGCTGCTTTTATAT  550

seq1  TCATTGAAAACAAGCTTAAAACACATACTGAAGACGTTTTGTTAAGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAAACAAGCTTAAAACACATACTGAAGACGTTTTGTTAAGACAG  600

seq1  CACACCCTCCCTTTCCTTTCCTTGGCTTCTAGCTTATGTTTTTAGGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCTCCCTTTCCTTTCCTTGGCTTCTAGCTTATGTTTTTAGGAGAA  650

seq1  GAACTGGTAAGAGTTTAGACATCAACCCAAGTGCAAATTAACCAACAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGTAAGAGTTTAGACATCAACCCAAGTGCAAATTAACCAACAACA  700

seq1  AACTTAATTTCACAAACTGTTAATATTCACTGTGATTATTTCCTCTCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAATTTCACAAACTGTTAATATTCACTGTGATTATTTCCTCTCAAG  750

seq1  ATAGTTCTGGCAGCTTTGAAGGAACAGCTGCAGCCCTCTCTCCTCGCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTGGCAGCTTTGAAGGAACAGCTGCAGCCCTCTCTCCTCGCTTC  800

seq1  CCTCCCTCCCTCTTTTCCTTCCTTCCTCCCTTTCTACAAGACTGGGAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTCTTTTCCTTCCTTCCTCCCTTTCTACAAGACTGGGAAGG  850

seq1  AAGGCAGGACTCTCAGGAATAGCAAAGCCTCAGGCAATTGTGTCCTGAGC  900
      ||||||||||||||| ||||||| |||||||| |||||||||||||||||
seq2  AAGGCAGGACTCTCACGAATAGC-AAGCCTCACGCAATTGTGTCCTGAGC  899

seq1  TGTTCCCAGGCACAACTGTGAGCAAGACACACATGGCTTCGATTGTCAAC  950
      ||||||||||||||||||||||| ||||||||||||||||||||||| ||
seq2  TGTTCCCAGGCACAACTGTGAGC-AGACACACATGGCTTCGATTGTC-AC  947

seq1  TGCACAGGAATGTGTGACGCTTTCAGCAAAGTTATAGCTTTCAAGCACTG  1000
      ||||||||||||||||||||||||||||||| |||||||||| |||||||
seq2  TGCACAGGAATGTGTGACGCTTTCAGCAAAG-TATAGCTTTC-AGCACTG  995

seq1  GGGTGGTTTAAATGCAGGCTTCCTGTATGTGCCGTTCGTTCTTCTGGGTT  1050
      |||||||||||||||| ||||||| ||||||||| |||||||||||||||
seq2  GGGTGGTTTAAATGCA-GCTTCCTTTATGTGCCG-TCGTTCTTCTGGGTT  1043

seq1  TCCCTTCTGGAG-ACTAGTTTCTTTCTTTCTGGTGACCTGCCTTCATGTA  1099
      |||||||||||| ||||| |||||||||||||||||||||||||||||| 
seq2  TCCCTTCTGGAGAACTAG-TTCTTTCTTTCTGGTGACCTGCCTTCATGT-  1091

seq1  AGCAAACAG-CATCACTCACAAGTTTTTTCCCTCCTTTGCCACTGTGTAC  1148
      ||| ||||| ||||||||   || ||||||| || || ||||||| ||||
seq2  AGC-AACAGACATCACTCCACAGGTTTTTCCTTCTTTGGCCACTG-GTAC  1139

seq1  CTGGT--ACACTATCCTACTTTGATGCTTGGGGAGAGATGGCTGGCCCAT  1196
      || ||   ||  ||||| |  ||| || | |||||| ||| |||| ||||
seq2  CTTGTTACCATAATCCT-CACTGAAGCCTTGGGAGA-ATGTCTGG-CCAT  1186

seq1  CTCTTTGTACACA-CATCCTCCCATATAAATGGGAAAGAA  1235
      ||||||||| ||| |||||| ||||||| ||||| |||||
seq2  CTCTTTGTA-ACACCATCCT-CCATATATATGGGGAAGAA  1224