BAC Information

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BAC

Clone NameB6Ng01-102O14
ChromosomeX (Build37)2 (Build37)
Map Location 47,625,289 - 47,626,406142,776,654 - 142,777,220
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEnox2, 1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322, LOC100040344, Olfr1323
Downstream geneEG665816, Olfr1324, LOC100041788, 6720401G13Rik, 2610018G03Rik, LOC100040422, Rap2c, LOC385355, Mbnl3, LOC665866, LOC385356
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102O14.bB6Ng01-102O14.g
ACCDH911665DH911666
length1,110588
definitionDH911665|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O14, 5' end.DH911666|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(47,625,289 - 47,626,406)(142,776,654 - 142,777,220)
sequence
gaattcaggaggcagtgcaagcctcctagaaattgtgtgttcccctggag
gcagagcaggtttggggggaaagtcagagtgaggggtggcaggacagtgg
agctaaaggtgcaacagcctgctcagggaagctggctaagcccatgggga
ctggatgaacatggtaatggtttccgggaagaaatctatactgtgtgctt
ccagactagtaggtctgatgaaggtgggtataggggtagccagacaatgg
ataactgggggacagaaggctgctctgagggctctgcatgcagtggaata
tgtttttagtctttaagattatttgtctcttttttgtatttcttgaatat
aattaaaatcattcttcttcaggcctggtttggaagttcttccaggtcat
cttcattaagtgctataattatgggattggtggtttacagaagagacctg
ttgccttgctttttcatgatcttcctttattttgcattgaaatttctgta
tctgggtgagcttgttgagtcttccttgcttccttctgtcccttctttct
ttcttccttctttacttaaatttttcaagctacatttctacttccctttt
cttcttttttgccaaaatgttatttttatattttattgtatattttattt
atttccatttcaaatgttatcccctttcctggtttccactctgaaaattc
cctctcccatcctccctccccctgcttctaggagggtgctcacacaccca
cccacacccacccttttccacatagtagaattctcttacactggggcatc
aagccttccaaggactaaagttctctccttccatttatgtcagacaagga
ctttctctgctacatatgtggctggagtgatggatccttccatgggtact
ctttggttggtggtttactcctgggagctctggagagtctggttggttga
tattgttgctttctgtggtgaaaaccccttcagctttatccgtctttctc
tactctcactggggactctgtactcactcaattgttggctgtgagcaatt
ctgactctggcaaagcctttcaggaaacgctatacaaggctctctgtcag
caagacactt
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagcagaaactttggagtt
tcattaggtcccatctgtcaattctcgatcttacagcacaagccattgct
gttctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccc
cactttctcctctataagtttcagtgtctctggttttatgtgaagttctt
tgatccatttagatttgaccttagtacaaggagataagtatggatcgatt
cgcattcttctacatgataacaaccagttgtgccaccaccaattgttgaa
aatgctgtctttcttccactggatggttttagctcccttgtcgaagatca
agtgaccataggtgtgtgggttcatttctgggtcttcaattctattccat
tggtctacttgtctgtctctataccagtaccatgcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_47625289_47626406
seq2: B6Ng01-102O14.b_47_1156

seq1  GAATTCAGGAGGCAGTGCAAGCCTCCTAGAAATTGTGTGTTCCCCTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGGCAGTGCAAGCCTCCTAGAAATTGTGTGTTCCCCTGGAG  50

seq1  GCAGAGCAGGTTTGGGGGGAAAGTCAGAGTGAGGGGTGGCAGGACAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCAGGTTTGGGGGGAAAGTCAGAGTGAGGGGTGGCAGGACAGTGG  100

seq1  AGCTAAAGGTGCAACAGCCTGCTCAGGGAAGCTGGCTAAGCCCATGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAGGTGCAACAGCCTGCTCAGGGAAGCTGGCTAAGCCCATGGGGA  150

seq1  CTGGATGAACATGGTAATGGTTTCCGGGAAGAAATCTATACTGTGTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGAACATGGTAATGGTTTCCGGGAAGAAATCTATACTGTGTGCTT  200

seq1  CCAGACTAGTAGGTCTGATGAAGGTGGGTATAGGGGTAGCCAGACAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTAGTAGGTCTGATGAAGGTGGGTATAGGGGTAGCCAGACAATGG  250

seq1  ATAACTGGGGGACAGAAGGCTGCTCTGAGGGCTCTGCATGCAGTGGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGGGGGACAGAAGGCTGCTCTGAGGGCTCTGCATGCAGTGGAATA  300

seq1  TGTTTTTAGTCTTTAAGATTATTTGTCTCTTTTTTGTATTTCTTGAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAGTCTTTAAGATTATTTGTCTCTTTTTTGTATTTCTTGAATAT  350

seq1  AATTAAAATCATTCTTCTTCAGGCCTGGTTTGGAAGTTCTTCCAGGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATCATTCTTCTTCAGGCCTGGTTTGGAAGTTCTTCCAGGTCAT  400

seq1  CTTCATTAAGTGCTATAATTATGGGATTGGTGGTTTACAGAAGAGACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAAGTGCTATAATTATGGGATTGGTGGTTTACAGAAGAGACCTG  450

seq1  TTGCCTTGCTTTTTCATGATCTTCCTTTATTTTGCATTGAAATTTCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGCTTTTTCATGATCTTCCTTTATTTTGCATTGAAATTTCTGTA  500

seq1  TCTGGGTGAGCTTGTTGAGTCTTCCTTGCTTCCTTCTGTCCCTTCTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGAGCTTGTTGAGTCTTCCTTGCTTCCTTCTGTCCCTTCTTTCT  550

seq1  TTCTTCCTTCTTTACTTAAATTTTTCAAGCTACATTTCTACTTCCCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTCTTTACTTAAATTTTTCAAGCTACATTTCTACTTCCCTTTT  600

seq1  CTTCTTTTTTGCCAAAATGTTATTTTTATATTTTATTGTATATTTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTTGCCAAAATGTTATTTTTATATTTTATTGTATATTTTATTT  650

seq1  ATTTCCATTTCAAATGTTATCCCCTTTCCTGGTTTCCACTCTGAAAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTTCAAATGTTATCCCCTTTCCTGGTTTCCACTCTGAAAATTC  700

seq1  CCTCTCCCATCCTCCCTCCCCCTGCTTCTAGGAGGGTGCTCACACACCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCATCCTCCCTCCCCCTGCTTCTAGGAGGGTGCTCACACACCCA  750

seq1  CCCACACCCACCCTTTTCCACATAGTAGAATTCTCTTACACTGGGGCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACCCACCCTTTTCCACATAGTAGAATTCTCTTACACTGGGGCATC  800

seq1  AAGCCTTCCAAGGACTAAGGTTCTCTCCTTCCATTTATGTCAGACAAGGA  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGCCTTCCAAGGACTAAAGTTCTCTCCTTCCATTTATGTCAGACAAGGA  850

seq1  CTTTCTCTGCTACATATGTGGCTGGAGTGATGGATCCTTCCATGGGTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTGCTACATATGTGGCTGGAGTGATGGATCCTTCCATGGGTACT  900

seq1  CTTTGGTTGGTGGTTTACTCCCTGGGAGCTCTGGAGAGTCTGGTTGGTTG  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTTGGTTGGTGGTTTACT-CCTGGGAGCTCTGGAGAGTCTGGTTGGTTG  949

seq1  ATATTGTTGCTTTTCCTGTTGGTTGAAAACCCCTTCAGCTCTATCCGTCC  1000
      |||||||||||||  ||||  | ||||||||||||||||| ||||||| |
seq2  ATATTGTTGCTTT--CTGT--GGTGAAAACCCCTTCAGCTTTATCCGT-C  994

seq1  TTTCTCTAACTCCTCCACTGGGGACTCTGTACTCACTTCAATTGTTGGCT  1050
      ||||||| ||||   ||||||||||||||||||||| |||||||||||||
seq2  TTTCTCT-ACTC--TCACTGGGGACTCTGTACTCAC-TCAATTGTTGGCT  1040

seq1  GTGAGC-ATTCTGACTCTGGCAGAGCCTCTCAGGAGACAGCTATACCAGG  1099
      |||||| ||||||||||||||| ||||| |||||| || ||||||| |||
seq2  GTGAGCAATTCTGACTCTGGCAAAGCCTTTCAGGAAAC-GCTATACAAGG  1089

seq1  CTC-CTGTCAGCAAG-CACTT  1118
      ||| ||||||||||| |||||
seq2  CTCTCTGTCAGCAAGACACTT  1110

seq1: chr2_142776654_142777220
seq2: B6Ng01-102O14.g_86_655 (reverse)

seq1  ACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAAT  50

seq1  TGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACA  100

seq1  AGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGG  150
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGG  150

seq1  TGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATA  200
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATA  200

seq1  CTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACA  250
      |||||||||||||||||||||||||||||| |||||||| ||||||||||
seq2  CTTATCTCCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACA  250

seq1  TAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTT  300

seq1  GAAGATATGGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTG  350
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTG  350

seq1  TGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTT  400
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCTGTAAGATCGAGAATTGACAGATGGGACCTAATGAAACTCCAAAGTT  400

seq1  T---CTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACA  447
      |   ||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTGCTGCAAGGCAAAAGACACCGTCAATAAGACAAAGAGACCACCAACA  450

seq1  GATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATC  500

seq1  CAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACC  547
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAACAACC  550

seq1  CCATTAAAAAATGGGGCTCA  567
      ||||||||||||||||||||
seq2  CCATTAAAAAATGGGGCTCA  570