BAC Information

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BAC

Clone NameB6Ng01-104B19
Chromosome2 (Build37)
Map Location 143,767,136 - 143,898,674
singlet/doubletdoublet
Overlap geneDstn, Rrbp1, 4930517K23Rik
Upstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534
Downstream geneLOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104B19.bB6Ng01-104B19.g
ACCDH912506DH912507
length1,1581,090
definitionDH912506|Mus musculus domesticus DNA, BAC clone: B6Ng01-104B19, 5' end.DH912507|Mus musculus domesticus DNA, BAC clone: B6Ng01-104B19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,767,136 - 143,768,299)(143,897,580 - 143,898,674)
sequence
gaattctctctgtagaccagacaggccagccacttgtctctttcaagtgc
tgggattaaaggtgttctccaccaccacccagcttctactttacatgtgc
atataagcatcagtgtgcagattcattgacaattgacatgtgagtgcagg
tgctctcagagtccagggcaccgtagtcacagctggctcatttgtgtggt
tggaagtcatcctgtgtgtgagtgctggggactgatctgcggtcctctga
cgatcataagcacgcttaaaccattcggccatgtctctagcctgtatttt
tacaatgactggcctgcttttttgttgaagcaccaccttagtaacgtgtg
ttcacagactgaacaatggattgtatccagttactagctcacaaatcctt
cctcaatgcttactttcccttgtaccattcccctgcctcttcctgaaccc
cagtagtaactggtatcctggcttctgactgcatacagtagcggggctga
tttagacttgaacagatggagtcataacggaatgtccacttgtgtttctg
gttgctttcaggcagcattacatttgttgacggggtcagtattttgttgc
atgtgcttatccatgatttcttcccgcaatcggattctgttctggaaaac
tgtaaattagttttggtaccttagagaaaggaatacgctgctgcataatc
ctaaacagaatttgttcttctctctaggtataaagcatgagtatcaagca
aatgggccagaagacctcaatcggacctgtattgctgaaaagctaggtgg
ctccttaattgtagcctttgaaggatcccctgtgtagaccgccagtcagt
gccacgagttgaaagcttcccatactgaacactatccttttcactatata
agtaaagcaaatatatttaggccaggatctcactgaggaatttgtcttgt
catcttttagagtaaactaaaaattgtatagtgtctgcaaacactaccct
acctaaatccagcctctaggtctcccctgtgttgaaattaaacttcttat
ggccaaatgctgtttcatgaggtgacttgtaaagattttgttagctcaga
attttattaacaagtcaccaaacagtaagcgagtatgaccagactcatct
ttgctaac
gaattcacaaaacctgcagcccagcactgccctgccctgggctgtccact
tgtacaggagtgtgtcttaaatgggaagacaaaggaagacacgcatgcct
cggagagttgtgcccgtgggaacagcacagacagacataaatcctgctaa
accttggccctcgttttccagcctcagactggagctgcatcactgcccca
cccccaccccacccccactccctttctgaatgagcatttcagctctcgga
cagagcagcaagctaccaatttccctgtctttccagtcagtagacagcca
aggtggagcctctaattgtgtgaaaataaataataaacaaatctcctcta
ataattatatataatctcctggtcctgtttctctggaaacccctgataat
aatgttcccaaggatgtctgtgtgctaaaaaaaaatgagcaaagtataat
ggcacggattacggaaacgtcactgcagatgccgttgccgttactttgta
ggccaactctaacaattaatttacaaaagaaaaaaaaaaattagagacta
gagagatggctcagtgaataagaacattttctgtgcccttacaaggacct
gagtttaagtccccagtatccacataaaaagttggctgtggtcatgcatg
tacccctaaccccagcattgtggggtcagagcttgctggagcttgctgga
gcttgctggagcttgctggagcttgctggagcttgctggccaactgccta
cctacagatccagtgaagactgtttcaagaaagtaggacaggatgataga
gcacggcactgacattgcactccagccgcttacgtgcatagaacacacac
acacgcacacgcacaaagaaaatatgtaaaccctcatagaagggcatatg
tattaagtgcccctcgatccgggttctatagaaatttgctgtttgagttt
tctgtctgctcctccaccagatctcacacatcagctgtatgatcaagaag
acaacagatcatgaagaacatacatggcagaggctagatttcaggtccca
gtgtacatgtgtcctctggggcatgttaagggctctctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143767136_143768299
seq2: B6Ng01-104B19.b_44_1201

seq1  GAATTCTCTCTGTAGACCAGACAGGCCAGCCACTTGTCTCTTTCAAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTAGACCAGACAGGCCAGCCACTTGTCTCTTTCAAGTGC  50

seq1  TGGGATTAAAGGTGTTCTCCACCACCACCCAGCTTCTACTTTACATGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTAAAGGTGTTCTCCACCACCACCCAGCTTCTACTTTACATGTGC  100

seq1  ATATAAGCATCAGTGTGCAGATTCATTGACAATTGACATGTGAGTGCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGCATCAGTGTGCAGATTCATTGACAATTGACATGTGAGTGCAGG  150

seq1  TGCTCTCAGAGTCCAGGGCACCGTAGTCACAGCTGGCTCATTTGTGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCAGAGTCCAGGGCACCGTAGTCACAGCTGGCTCATTTGTGTGGT  200

seq1  TGGAAGTCATCCTGTGTGTGAGTGCTGGGGACTGATCTGCGGTCCTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCATCCTGTGTGTGAGTGCTGGGGACTGATCTGCGGTCCTCTGA  250

seq1  CGATCATAAGCACGCTTAAACCATTCGGCCATGTCTCTAGCCTGTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCATAAGCACGCTTAAACCATTCGGCCATGTCTCTAGCCTGTATTTT  300

seq1  TACAATGACTGGCCTGCTTTTTTGTTGAAGCACCACCTTAGTAACGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGACTGGCCTGCTTTTTTGTTGAAGCACCACCTTAGTAACGTGTG  350

seq1  TTCACAGACTGAACAATGGATTGTATCCAGTTACTAGCTCACAAATCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGACTGAACAATGGATTGTATCCAGTTACTAGCTCACAAATCCTT  400

seq1  CCTCAATGCTTACTTTCCCTTGTACCATTCCCCTGCCTCTTCCTGAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATGCTTACTTTCCCTTGTACCATTCCCCTGCCTCTTCCTGAACCC  450

seq1  CAGTAGTAACTGGTATCCTGGCTTCTGACTGCATACAGTAGCGGGGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTAACTGGTATCCTGGCTTCTGACTGCATACAGTAGCGGGGCTGA  500

seq1  TTTAGACTTGAACAGATGGAGTCATAACGGAATGTCCACTTGTGTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACTTGAACAGATGGAGTCATAACGGAATGTCCACTTGTGTTTCTG  550

seq1  GTTGCTTTCAGGCAGCATTACATTTGTTGACGGGGTCAGTATTTTGTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTTCAGGCAGCATTACATTTGTTGACGGGGTCAGTATTTTGTTGC  600

seq1  ATGTGCTTATCCATGATTTCTTCCCGCAATCGGATTCTGTTCTGGAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTTATCCATGATTTCTTCCCGCAATCGGATTCTGTTCTGGAAAAC  650

seq1  TGTAAATTAGTTTTGGTACCTTAGAGAAAGGAATACGCTGCTGCATAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTAGTTTTGGTACCTTAGAGAAAGGAATACGCTGCTGCATAATC  700

seq1  CTAAACAGAATTTGTTCTTCTCTCTAGGTATAAAGCATGAGTATCAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAGAATTTGTTCTTCTCTCTAGGTATAAAGCATGAGTATCAAGCA  750

seq1  AATGGGCCAGAAGACCTCAATCGGACCTGTATTGCTGAAAAGCTAGGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGCCAGAAGACCTCAATCGGACCTGTATTGCTGAAAAGCTAGGTGG  800

seq1  CTCCTTAATTGTAGCCTTTGAAGGATCCCCTGTGTAGACCGCCAGTCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAATTGTAGCCTTTGAAGGATCCCCTGTGTAGACCGCCAGTCAGT  850

seq1  GCCACGAGTTGAAAGCTT-CCATACTGAACACTATCC-TTTCACTATATA  898
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  GCCACGAGTTGAAAGCTTCCCATACTGAACACTATCCTTTTCACTATATA  900

seq1  AGTAAAGCAAATATA-TTAGGCCAGGATCTCACTGAGGAATTTGTCTTGT  947
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCAAATATATTTAGGCCAGGATCTCACTGAGGAATTTGTCTTGT  950

seq1  CATCTTTTAGAGTAAACTAAAAATTGTATAGTGTCTGCAAACACTACCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTAGAGTAAACTAAAAATTGTATAGTGTCTGCAAACACTACCCT  1000

seq1  ACCTAAATCCAGCCTCTAAGGTCTCACTGGTG-TGGAATTAAAC-TCTTA  1045
      ||||||||||||||||| ||||||| |  ||| || |||||||| |||||
seq2  ACCTAAATCCAGCCTCT-AGGTCTCCCCTGTGTTGAAATTAAACTTCTTA  1049

seq1  TTGGCCAAATGCCTGTTTTCATGAGGTGACTTGTAAAGATTTTGTTAAGC  1095
       |||||||||| ||| |||||||||||||||||||||||||||||| |||
seq2  -TGGCCAAATG-CTG-TTTCATGAGGTGACTTGTAAAGATTTTGTT-AGC  1095

seq1  TCAGGATTTTTAATAACACAGTTCACAAAACAGTACAAGGCAGTATGACG  1145
      ||| || ||||| ||||| || |||| |||||||  |||  |||||||| 
seq2  TCA-GAATTTTATTAACA-AG-TCACCAAACAGT--AAGCGAGTATGACC  1140

seq1  AGAACTCATCTTTGCTAAC  1164
      || ||||||||||||||||
seq2  AG-ACTCATCTTTGCTAAC  1158

seq1: chr2_143897580_143898674
seq2: B6Ng01-104B19.g_67_1156 (reverse)

seq1  CTAGAGAGCCCCTAAACCATGCCCCAGAGG-CACATGTACACTGTGACCT  49
      ||||||||||| |||  ||||||||||||| ||||||||||||| |||||
seq2  CTAGAGAGCCCTTAA--CATGCCCCAGAGGACACATGTACACTGGGACCT  48

seq1  GAAATCTAGCCTCTGCCATGTATG-TCTTCATGATCCTGTTGTCTTCTTG  98
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  GAAATCTAGCCTCTGCCATGTATGTTCTTCATGAT-CTGTTGTCTTCTTG  97

seq1  ATCATAACAGCCTGATGTTGTGAGATCT-GTGGAGGAGCAGACAGAAAAC  147
      ||||| |||| |||||| |||||||||| |||||||||||||||||||||
seq2  ATCAT-ACAG-CTGATG-TGTGAGATCTGGTGGAGGAGCAGACAGAAAAC  144

seq1  TCAAAACAGCAAAATTTCTATAGAACCCGGAATCGAGGGGCACTTAATAC  197
      || ||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  TC-AAACAGC-AAATTTCTATAGAACCCGG-ATCGAGGGGCACTTAATAC  191

seq1  ATATGCCCTTCTATG-GGGTTTACATATTTTCTTTGTGCGTGTGCGTGTG  246
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATATGCCCTTCTATGAGGGTTTACATATTTTCTTTGTGCGTGTGCGTGTG  241

seq1  TGTGTGTTCTATGCACGTAAGCGGCTGGAGTGCAATGTCAGTGCCGTGCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTCTATGCACGTAAGCGGCTGGAGTGCAATGTCAGTGCCGTGCT  291

seq1  CTATCATCCTGTCCTACTTTCTTGAAACAGTCTTCACTGGATCTGTAGGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATCCTGTCCTACTTTCTTGAAACAGTCTTCACTGGATCTGTAGGT  341

seq1  AGGCAGTTGGCCAGCAAGCTCCAGCAAGCTCCAGCAAGCTCCAGCAAGCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTTGGCCAGCAAGCTCCAGCAAGCTCCAGCAAGCTCCAGCAAGCT  391

seq1  CCAGCAAGCTCCAGCAAGCTCTGACCCCACAATGCTGGGGTTAGGGGTAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAGCTCCAGCAAGCTCTGACCCCACAATGCTGGGGTTAGGGGTAC  441

seq1  ATGCATGACCACAGCCAACTTTTTATGTGGATACTGGGGACTTAAACTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGACCACAGCCAACTTTTTATGTGGATACTGGGGACTTAAACTCA  491

seq1  GGTCCTTGTAAGGGCACAGAAAATGTTCTTATTCACTGAGCCATCTCTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTGTAAGGGCACAGAAAATGTTCTTATTCACTGAGCCATCTCTCT  541

seq1  AGTCTCTAATTTTTTTTTTTCTTTTGTAAATTAATTGTTAGAGTTGGCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTAATTTTTTTTTTTCTTTTGTAAATTAATTGTTAGAGTTGGCCT  591

seq1  ACAAAGTAACGGCAACGGCATCTGCAGTGACGTTTCCGTAATCCGTGCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTAACGGCAACGGCATCTGCAGTGACGTTTCCGTAATCCGTGCCA  641

seq1  TTATACTTTGCTCATTTTTTTTTAGCACACAGACATCCTTGGGAACATTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTTTGCTCATTTTTTTTTAGCACACAGACATCCTTGGGAACATTA  691

seq1  TTATCAGGGGTTTCCAGAGAAACAGGACCAGGAGATTATATATAATTATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGGGGTTTCCAGAGAAACAGGACCAGGAGATTATATATAATTATT  741

seq1  AGAGGAGATTTGTTTATTATTTATTTTCACACAATTAGAGGCTCCACCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATTTGTTTATTATTTATTTTCACACAATTAGAGGCTCCACCTT  791

seq1  GGCTGTCTACTGACTGGAAAGACAGGGAAATTGGTAGCTTGCTGCTCTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCTACTGACTGGAAAGACAGGGAAATTGGTAGCTTGCTGCTCTGT  841

seq1  CCGAGAGCTGAAATGCTCATTCAGAAAGGGAGTGGGGGTGGGGTGGGGGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGAGCTGAAATGCTCATTCAGAAAGGGAGTGGGGGTGGGGTGGGGGT  891

seq1  GGGGCAGTGATGCAGCTCCAGTCTGAGGCTGGAAAACGAGGGCCAAGGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGTGATGCAGCTCCAGTCTGAGGCTGGAAAACGAGGGCCAAGGTT  941

seq1  TAGCAGGATTTATGTCTGTCTGTGCTGTTCCCACGGGCACAACTCTCCGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGATTTATGTCTGTCTGTGCTGTTCCCACGGGCACAACTCTCCGA  991

seq1  GGCATGCGTGTCTTCCTTTGTCTTCCCATTTAAGACACACTCCTGTACAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCGTGTCTTCCTTTGTCTTCCCATTTAAGACACACTCCTGTACAA  1041

seq1  GTGGACAGCCCAGGGCAGGGCAGTGCTGGGCTGCAGGTTTTGTGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAGCCCAGGGCAGGGCAGTGCTGGGCTGCAGGTTTTGTGAATTC  1090