BAC Information

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BAC

Clone NameB6Ng01-104G12
Chromosome2 (Build37)
Map Location 112,445,497 - 112,556,238
singlet/doubletdoublet
Overlap geneAven, Ryr3
Upstream geneOlfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5
Downstream gene4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104G12.bB6Ng01-104G12.g
ACCDH912717DH912718
length857941
definitionDH912717|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G12, 5' end.DH912718|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,555,364 - 112,556,238)(112,445,497 - 112,446,406)
sequence
gaattccaatagaactatagtgatttgatgaaatctgaaggccaaactgc
caaattataggccttgccatgttaggagaaacaaaaatatagtaagtcat
tttaaactatagtccatctcatctagagacaaggttttctgaaattatgg
atatatactgcaaatgaacagccatactccataaaagttccatttatttc
aggtgctctttcttaaaatgtcatgaggtcctaagcacaccttgtcacca
gtgtccttctaatctagaatgcagagtgctaaactacagcagtttcagtc
tttattgcttatttcacatactaagaataccctaccccaaccattccccc
cataaaaagggttcccaggataatttaggttaagaccactaataaaattc
tactgaattagaatagcagagggaactagaggctggcatttgatatgcac
cacaggtattcaccaatagaaaaccagacgccccattcaccaaaggcaag
gggagatgaaggaagtggctctctctggcaggcagaaacctatttcacag
gttgttgttgtcagggtgtcaagtttgagctgagtccatactgtcatttt
gggggcatttttgccttttagggacctttggacctaataccttttgcatc
agcaacactgagacttgaccccaagtctcctgcttttcacagttggttta
atagcaatgaatgaatgctgagcatctctgtggctctttctaagtcattt
ctgcatcaaatgattttgggagcgggattacttggaaagtactgatagct
tatggaacataagactgtagactttatcattacaaatggtggctgagaga
aggagag
gaattcatccgacagtgattgttctattgattgagaacctgatccaagat
ctgtggagtgctgctcagacacacacagcgatatgctttattctaatcaa
cttgctaataaagactaactaggacacttctcaaaataatatatatttag
tacagtcatacacaaattccataaatagaaacacgaatgctaaaattctt
gtaaagctgggagaataagaaaccctgactatccatagcaaaactgagga
aggaaagcagtgttggggggatgagaattcctgatttaagattttatgtc
aaagctataataatcaaaacaaactggcactggcatagaacagaaacaca
caccaggcacaccaggggagtgtcagtaaactagaaataattcccaacct
gtgtgcctgacttaaggtttctaatgctgtgatataccatggccaaagtc
aacactgggagggaatggcttattttatcttacagattatagcttaaagt
tgatcatgagaaaaggcaaggcagaacctcaaggcatgaatgtggaggca
ggagctgttgcagagaccatggagaggtgctgcttactggtttactcctc
atagcctgctcggctacctcaaacatgaatcaagaaaacctaccacaacc
ttttctcttggccagtatggggattccacaggctttttatgctggccact
atgggtgtggtggtgcacgagtgtgcgccatgtgtgcagtctttttcaat
taaggttttctcttccaaaatgactctaccttgtatcaagttgacataaa
actagccagcacagtggccaactcaccaaaggtgccaaaacttatctggg
aaggatagtttcaataataccccccacactggatatacacatgtaaatgt
ctgaaactgtacctttgtctaataccacactcaaaaaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112555364_112556238
seq2: B6Ng01-104G12.b_43_899 (reverse)

seq1  CTCTCCTTTTCTCCTTCAGCCACCCATTTTGTAATGAATAAAGTCTACAG  50
      |||||||| ||    |||||||||   ||||||||| |||||||||||||
seq2  CTCTCCTTCTC----TCAGCCACC--ATTTGTAATG-ATAAAGTCTACAG  43

seq1  TCTTATGTTCCACTAAGCTATCAGTTACTCTCCAGGTAATTCACGCTTCC  100
      |||||||||||| ||||||||||| |||| |||| |||| || ||| |||
seq2  TCTTATGTTCCA-TAAGCTATCAG-TACTTTCCAAGTAA-TCCCGC-TCC  89

seq1  CAAAATTCATTTTGATGCAGATATGACTTTAGAAAGAGCCACAGAGATGC  150
      ||||| ||| ||||||||||| ||||| ||||||||||||||||||||||
seq2  CAAAA-TCA-TTTGATGCAGAAATGAC-TTAGAAAGAGCCACAGAGATGC  136

seq1  TCAGCATTCATTCATTGCTTATTTAAACCAACTGTGAAAAGCAGGAGACT  200
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  TCAGCATTCATTCATTGCT--ATTAAACCAACTGTGAAAAGCAGGAGACT  184

seq1  TGGGGGTCAAGTCTCAGTGTTGCTGATGCAAAAAGGTATTAGGTCCAAAG  250
      | ||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  T-GGGGTCAAGTCTCAGTGTTGCTGATGC-AAAAGGTATTAGGTCCAAAG  232

seq1  GTCCCTAAAAGGCAAAAATGCCCCCAAAATGACAGTATGGACTCAGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTAAAAGGCAAAAATGCCCCCAAAATGACAGTATGGACTCAGCTCA  282

seq1  AACTTGACACCCTGACAACAACAACCTGTGAAATAGGTTTCTGCCTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGACACCCTGACAACAACAACCTGTGAAATAGGTTTCTGCCTGCCA  332

seq1  GAGAGAGCCACTTCCTTCATCTCCCCTTGCCTTTGGTGAATGGGGCGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCCACTTCCTTCATCTCCCCTTGCCTTTGGTGAATGGGGCGTCT  382

seq1  GGTTTTCTATTGGTGAATACCTGTGGTGCATATCAAATGCCAGCCTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTATTGGTGAATACCTGTGGTGCATATCAAATGCCAGCCTCTAG  432

seq1  TTCCCTCTGCTATTCTAATTCAGTAGAATTTTATTAGTGGTCTTAACCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTGCTATTCTAATTCAGTAGAATTTTATTAGTGGTCTTAACCTA  482

seq1  AATTATCCTGGGAACCCTTTTTATGGGGGGAATGGTTGGGGTAGGGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCCTGGGAACCCTTTTTATGGGGGGAATGGTTGGGGTAGGGTATT  532

seq1  CTTAGTATGTGAAATAAGCAATAAAGACTGAAACTGCTGTAGTTTAGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTATGTGAAATAAGCAATAAAGACTGAAACTGCTGTAGTTTAGCAC  582

seq1  TCTGCATTCTAGATTAGAAGGACACTGGTGACAAGGTGTGCTTAGGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTCTAGATTAGAAGGACACTGGTGACAAGGTGTGCTTAGGACCT  632

seq1  CATGACATTTTAAGAAAGAGCACCTGAAATAAATGGAACTTTTATGGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACATTTTAAGAAAGAGCACCTGAAATAAATGGAACTTTTATGGAGT  682

seq1  ATGGCTGTTCATTTGCAGTATATATCCATAATTTCAGAAAACCTTGTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGTTCATTTGCAGTATATATCCATAATTTCAGAAAACCTTGTCTC  732

seq1  TAGATGAGATGGACTATAGTTTAAAATGACTTACTATATTTTTGTTTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAGATGGACTATAGTTTAAAATGACTTACTATATTTTTGTTTCTC  782

seq1  CTAACATGGCAAGGCCTATAATTTGGCAGTTTGGCCTTCAGATTTCATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATGGCAAGGCCTATAATTTGGCAGTTTGGCCTTCAGATTTCATCA  832

seq1  AATCACTATAGTTCTATTGGAATTC  875
      |||||||||||||||||||||||||
seq2  AATCACTATAGTTCTATTGGAATTC  857

seq1: chr2_112445497_112446406
seq2: B6Ng01-104G12.g_70_977

seq1  GAATTCATCCGACAGTGATTGTTCTATTGATTGAGAACCTGATCCAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCGACAGTGATTGTTCTATTGATTGAGAACCTGATCCAAGAT  50

seq1  CTGTGGAGTGCTGCTCAGACACACACAGCGATATGCTTTATTCTAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAGTGCTGCTCAGACACACACAGCGATATGCTTTATTCTAATCAA  100

seq1  CTTGCTAATAAAGACTAACTAGGACACTTCTCAAAATAATATATATTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAATAAAGACTAACTAGGACACTTCTCAAAATAATATATATTTAG  150

seq1  TACAGTCATACACAAATTCCATAAATAGAAACACGAATGCTAAAATTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCATACACAAATTCCATAAATAGAAACACGAATGCTAAAATTCTT  200

seq1  GTAAAGCTGGGAGAATAAGAAACCCTGACTATCCATAGCAAAACTGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCTGGGAGAATAAGAAACCCTGACTATCCATAGCAAAACTGAGGA  250

seq1  AGGAAAGCAGTGTTGGGGGGATGAGAATTCCTGATTTAAGATTTTATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGCAGTGTTGGGGGGATGAGAATTCCTGATTTAAGATTTTATGTC  300

seq1  AAAGCTATAATAATCAAAACAAACTGGCACTGGCATAGAACAGAAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATAATAATCAAAACAAACTGGCACTGGCATAGAACAGAAACACA  350

seq1  CACCAGGCACACCAGGGGAGTGTCAGTAAACTAGAAATAATTCCCAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCACACCAGGGGAGTGTCAGTAAACTAGAAATAATTCCCAACCT  400

seq1  GTGTGCCTGACTTAAGGTTTCTAATGCTGTGATATACCATGGCCAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTGACTTAAGGTTTCTAATGCTGTGATATACCATGGCCAAAGTC  450

seq1  AACACTGGGAGGGAATGGCTTATTTTATCTTACAGATTATAGCTTAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGGAGGGAATGGCTTATTTTATCTTACAGATTATAGCTTAAAGT  500

seq1  TGATCATGAGAAAAGGCAAGGCAGAACCTCAAGGCATGAATGTGGAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATGAGAAAAGGCAAGGCAGAACCTCAAGGCATGAATGTGGAGGCA  550

seq1  GGAGCTGTTGCAGAGACCATGGAGAGGTGCTGCTTACTGGTTTACTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGTTGCAGAGACCATGGAGAGGTGCTGCTTACTGGTTTACTCCTC  600

seq1  ATAGCCTGCTCGGCTACCTCAAACATGAATCAAGAAAACCTACCACAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTGCTCGGCTACCTCAAACATGAATCAAGAAAACCTACCACAACC  650

seq1  TTTTCTCTTGGCCAGTATGGGGATTCCACAGGC-TTTTATGCTGGCCACT  699
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTCTCTTGGCCAGTATGGGGATTCCACAGGCTTTTTATGCTGGCCACT  700

seq1  ATGGGTGTGGTGGTGCACGAGTGTGCGCCATGTGTGCAGTC-TTTTCAAT  748
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATGGGTGTGGTGGTGCACGAGTGTGCGCCATGTGTGCAGTCTTTTTCAAT  750

seq1  TAAGGTTTTCTCTTCCAAAATGACTCTACCTTGTATCAAGTTGACATAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTTCTCTTCCAAAATGACTCTACCTTGTATCAAGTTGACATAAA  800

seq1  ACTAGCCAGCACAGTGGCCAACTCACCAAAGGTGCCAAAAACTTATACTG  848
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  ACTAGCCAGCACAGTGGCCAACTCACCAAAGGTGCC-AAAACTTAT-CTG  848

seq1  GGAAGGATAGTTTCAAATAATACCCCCCACAACTGGATATACACATGTAA  898
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  GGAAGGATAGTTTC-AATAATACCCCCCAC-ACTGGATATACACATGTAA  896

seq1  ATGTCTGAAACT  910
      ||||||||||||
seq2  ATGTCTGAAACT  908