BAC Information

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BAC

Clone NameB6Ng01-105H07
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,686 - 142,777,69863,096,683 - 63,097,176
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105H07.bB6Ng01-105H07.g
ACCDH913474DH913475
length1,023488
definitionDH913474|Mus musculus domesticus DNA, BAC clone: B6Ng01-105H07, 5' end.DH913475|Mus musculus domesticus DNA, BAC clone: B6Ng01-105H07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,686 - 142,777,698)(63,096,683 - 63,097,176)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtctaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtctttgccttacagaaactttggagtttcat
taggtcccatttgtcaattctcgatcgtacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataaatttcagtgtctctggttttatgtgaagttctttgat
ccatttagatttgaccttagtacaaggagataagtatggatcaattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcaaagatcaagtg
acaataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttaccacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagtttttatcatac
agatctttcacttcttagtaagagtcactccgagatatttatattatttg
tgactattgagaaggtgttgttccttaatttctttctcagctgtttattc
ttggtgtagagaacgccattgac
ctctgatccatgaactgccttagctctgaaatttgttgattttttttttc
tatcaatagaagaaagattttacttagggcccaagtagcagaacacaggc
aaagtggcagctgaagcagggatctgagactgaggcctcacatttcaaac
cacacaacagaaagcagacagcacacaggaagtggtacatggcttctgaa
accccaaagctgtcctccagcaaggcctcatctccttagcctcccttagc
agcaccaccaaccagggaccaagtagtcaaatgcatgaggattttggggg
ggggggggacatgtaattcaaaccaccacatacgtctccctggttttcct
agtcttgtggccataacatactgcaacatgaatcttgtccccacagtccc
tcagtctcaagacttgaaaaatctgaagcccatggggctggagtgatggc
tcagcagttaagaatactgactgcttttccagaggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776686_142777698
seq2: B6Ng01-105H07.b_44_595 (reverse)

seq1  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATT  50

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGAC  100
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  GTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGAC  100

seq1  AGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  150

seq1  AATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGT  200
      |||| |||| |||||||||||||||||||||||||||||||||||||| |
seq2  AATGCGAATTGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAAT  200

seq1  GGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  250
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  GGATCAAAGAACTTCACATAAAACCAGAGACACTGAAATTTATAGAGGAG  250

seq1  AAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAA  300
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAA  300

seq1  CAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACC  350
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGAACAGCAATGGCTTGTGCTGTACGATCGAGAATTGACAAATGGGACC  350

seq1  TAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACA  400
      |||||||||||||||||||||| ||||| |||||||||||||||||||||
seq2  TAATGAAACTCCAAAGTTTCTGTAAGGC-AAAGACACCGTCAATAAGACA  399

seq1  AAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGA  450
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGA  449

seq1  TAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCA  500
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTAGACTTCA  499

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTG  550
      ||||||||||||||||||||||||||||||||||| ||            
seq2  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAA----------CT  539

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  600
      ||| |||||    |||                                  
seq2  GAACAAAGA----ATTC---------------------------------  552

seq1  CATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  650
                                                        
seq2  --------------------------------------------------  552

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  700
                                                        
seq2  --------------------------------------------------  552

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  750
                                                        
seq2  --------------------------------------------------  552

seq1  AATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  800
                                                        
seq2  --------------------------------------------------  552

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGT  850
                                                        
seq2  --------------------------------------------------  552

seq1  CTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATC  900
                                                        
seq2  --------------------------------------------------  552

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  950
                                                        
seq2  --------------------------------------------------  552

seq1  GTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACT  1000
                                                        
seq2  --------------------------------------------------  552

seq1  GAACAAAGAATTC  1013
                   
seq2  -------------  552

seq1: chr10_63096683_63097176
seq2: B6Ng01-105H07.g_70_563

seq1  GAATTCCTCTGATCCATGAACTGCCTTAGCTCTGAAATTTGTTGATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGATCCATGAACTGCCTTAGCTCTGAAATTTGTTGATTTTT  50

seq1  TTTTTCTATCAATAGAAGAAAGATTTTACTTAGGGCCCAAGTAGCAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATCAATAGAAGAAAGATTTTACTTAGGGCCCAAGTAGCAGAAC  100

seq1  ACAGGCAAAGTGGCAGCTGAAGCAGGGATCTGAGACTGAGGCCTCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAAGTGGCAGCTGAAGCAGGGATCTGAGACTGAGGCCTCACATT  150

seq1  TCAAACCACACAACAGAAAGCAGACAGCACACAGGAAGTGGTACATGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCACACAACAGAAAGCAGACAGCACACAGGAAGTGGTACATGGCT  200

seq1  TCTGAAACCCCAAAGCTGTCCTCCAGCAAGGCCTCATCTCCTTAGCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACCCCAAAGCTGTCCTCCAGCAAGGCCTCATCTCCTTAGCCTCC  250

seq1  CTTAGCAGCACCACCAACCAGGGACCAAGTAGTCAAATGCATGAGGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAGCACCACCAACCAGGGACCAAGTAGTCAAATGCATGAGGATTT  300

seq1  TGGGGGGGGGGGGGACATGTAATTCAAACCACCACATACGTCTCCCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGGGGGGGGACATGTAATTCAAACCACCACATACGTCTCCCTGGT  350

seq1  TTTCCTAGTCTTGTGGCCATAACATACTGCAACATGAATCTTGTCCCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGTCTTGTGGCCATAACATACTGCAACATGAATCTTGTCCCCAC  400

seq1  AGTCCCTCAGTCTCAAGACTTGAAAAATCTGAAGCCCATGGGGCTGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTCAGTCTCAAGACTTGAAAAATCTGAAGCCCATGGGGCTGGAGT  450

seq1  GATGGCTCAGCAGTTAAGAATACTGACTGCTCTTCCAGAGGTCC  494
      ||||||||||||||||||||||||||||||| ||||||||||||
seq2  GATGGCTCAGCAGTTAAGAATACTGACTGCTTTTCCAGAGGTCC  494