BAC Information

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BAC

Clone NameB6Ng01-105P10
Chromosome2 (Build37)
Map Location 8,065,670 - 8,231,671
singlet/doubletdoublet
Overlap geneLOC672230
Upstream geneLOC100040648
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105P10.bB6Ng01-105P10.g
ACCDH913842DH913843
length1,1231,122
definitionDH913842|Mus musculus domesticus DNA, BAC clone: B6Ng01-105P10, 5' end.DH913843|Mus musculus domesticus DNA, BAC clone: B6Ng01-105P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,230,539 - 8,231,671)(8,065,670 - 8,066,811)
sequence
gaattcattattcaatgtgtcttcagttctcccagcaacattatctgtaa
ttacaattagaaagaatggctcacattatgaaaatccagtctctggcaaa
tgggcctcttgtatgatccaacctggtccattctgaggaaggatctgtgc
cagagcaggaagggatggttcgctctccatcagtgctttgttctcttgtc
tgttatgtaatggagaacgctgtgcctaattacaaattcatcaataaaac
tcaagaatgagtatgaatataacattttttgttggataatactatcctag
gtttgtgaagactttgattcttttaaaaatacactcatataattctttgg
cttcagatttattcctgccccatctttttgtattaggagtcaaaattttt
ccactcccagctgttatcaacaagcagacaattctttattccttaaagtg
cttatagaattaaaataagtcaacagaccatataatccaacaaaggcata
gaccccaggaagtttcttattatccattttcagtatgaatgagtttacac
acacacacacacacacacacacacacacacacacacaaaacacacacata
tgcatgcacttgcacaaacaggcactcatgtgtgctcacacacatatata
catctagaataaatggacacacacactctctctcactaatatacatacag
cacacatgcactcaaatatacacatgtatgcacacacaaccacaaatata
ctcatacacatacacacaccaatcttgaagctatttaactgaaaatcaga
acttaacatgccaccattgtcatttctcaagtcaatttttgctattgatt
gtctactttttttgattttttaaaaaaaatgtttttagatattttcttta
tttacatttcaaatgtcattccctttcctagtttccctccaaaaatcccc
tatcttctaccaatcccctgctactcaccacccgttcctgctctggccct
ggcatttccctatactggggcatagaaccttcaaggaccaaggcctctcc
tccttgatgactgactaggccatcctctgcttacatatgcagctacaggc
ataagtcccatcattattttctt

gaattctttgtatcctgattctattcttgattcttcttcttggagtaaaa
ttttccactgtttttcagtgacttgtattgaattacttcatgtcatcttt
aaatgtaaaacaaaacaaaacaaacaaaacaacatgacatcttcagtcct
taaactcttagaaacttcttctgctttgagctcttttagctttctccaat
aatagagtgtctattttatcattccttccagaagctactattaatctttc
cattgattcaatggccatgaaattttcctctattttcatcacagtagatg
gttgtgtttcattgaggatgcaggactgtcaggcttctaacattcttcaa
agaattttctccattccttgtagcctgcatcatcaagcaaaatttcagtt
ggattcaattggatgcactcactttcagtgcttagtaaagtctgtagagt
aaaatgattgcccacagagataatttcccctactgtgtgtgtgtgtaact
tttaggtgtttgacaatttcatgacagtctttatcaattccttatcaaaa
tgatgtagctaaattttctcaccagactacatggtagctgaatttttcac
ttgtgttctattagagatgaattggtctccacattccatttcaacttatg
gacattttattttcttgaggttttattgcagttattacctggtgactcat
agtctttcgttattgctagaaaattcactcttggtatatggggagagctg
tcctttctacctttccacattctaggaaaggtcaataaatatgttctaat
attgtgtctaagcactactttgttacagtcagaaaatttgcctgtaaata
aagccatgaaaatttataagagccatgcctgtagcttagggaacttttca
gatctgttcagatgtctgttgatgcttttaagtctgtgctatctgtcaga
aataaagtctatcatgtacaccaaattatttggaaaatatagataccccc
aatgctactattatccataatttgattgtgatgaatctcaaataagtaga
agtattatagctgtttggggtttgttatcctaaccaggtgaaactcttct
gccactaaaaattttcctaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8230539_8231671
seq2: B6Ng01-105P10.b_43_1165 (reverse)

seq1  AAGAAAAAACATGGTGGGACTTATGGCTGTAGCTGCATATGT-AGCAGAG  49
      ||||||| | ||| ||||||||||| |||||||||||||||| |||||||
seq2  AAGAAAATA-ATGATGGGACTTATGCCTGTAGCTGCATATGTAAGCAGAG  49

seq1  GATGGCCTAGTCAGTCATCAAAGGGAGGAGAGGCCCTTGGTCCTTTGAAG  99
      |||||||||||||||||||||  |||||||||| ||||||||| ||||||
seq2  GATGGCCTAGTCAGTCATCAA--GGAGGAGAGG-CCTTGGTCC-TTGAAG  95

seq1  GTTCTATGCCCCAGTATAGGGAAATGCCAGGGCCAGGAAGCAGGAACGGG  149
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  GTTCTATGCCCCAGTATAGGGAAATGCCAGGGCCAG--AGCAGGAACGGG  143

seq1  TGGGTGAGTAAGCAGGGGGATTTGGTAGAAGATAGGGGATTTTTGGAGGG  199
      | ||||||| ||||||||   |||||||||||||||||||||||||| ||
seq2  T-GGTGAGT-AGCAGGGG--ATTGGTAGAAGATAGGGGATTTTTGGA-GG  188

seq1  GAAACTAGGAAAGGGAATGACATTTGAAATGTAAATAAAGAAAATATCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAGGAAAGGGAATGACATTTGAAATGTAAATAAAGAAAATATCTA  238

seq1  AAAACATTTTTTTTAAAAAATC-AAAAAAGTAGACAATCAATAGCAAAAA  298
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAACATTTTTTTTAAAAAATCAAAAAAAGTAGACAATCAATAGCAAAAA  288

seq1  TTGACTTGAGAAATGACAATGGTGGCATGTTAAGTTCTGATTTTCAGTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTGAGAAATGACAATGGTGGCATGTTAAGTTCTGATTTTCAGTTA  338

seq1  AATAGCTTCAAGATTGGTGTGTGTATGTGTATGAGTATATTTGTGGTTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTTCAAGATTGGTGTGTGTATGTGTATGAGTATATTTGTGGTTGT  388

seq1  GTGTGCATACATGTGTATATTTGAGTGCATGTGTGCTGTATGTATATTAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATACATGTGTATATTTGAGTGCATGTGTGCTGTATGTATATTAG  438

seq1  TGAGAGAGAGTGTGTGTGTCCATTTATTCTAGATGTATATATGTGTGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGAGTGTGTGTGTCCATTTATTCTAGATGTATATATGTGTGTGA  488

seq1  GCACACATGAGTGCCTGTTTGTGCAAGTGCATGCATATGTGTGTGTTTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACATGAGTGCCTGTTTGTGCAAGTGCATGCATATGTGTGTGTTTTG  538

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACTCATTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACTCATTCA  588

seq1  TACTGAAAATGGATAATAAGAAACTTCCTGGGGTCTATGCCTTTGTTGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAAATGGATAATAAGAAACTTCCTGGGGTCTATGCCTTTGTTGGA  638

seq1  TTATATGGTCTGTTGACTTATTTTAATTCTATAAGCACTTTAAGGAATAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGGTCTGTTGACTTATTTTAATTCTATAAGCACTTTAAGGAATAA  688

seq1  AGAATTGTCTGCTTGTTGATAACAGCTGGGAGTGGAAAAATTTTGACTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGTCTGCTTGTTGATAACAGCTGGGAGTGGAAAAATTTTGACTCC  738

seq1  TAATACAAAAAGATGGGGCAGGAATAAATCTGAAGCCAAAGAATTATATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAAAAAGATGGGGCAGGAATAAATCTGAAGCCAAAGAATTATATG  788

seq1  AGTGTATTTTTAAAAGAATCAAAGTCTTCACAAACCTAGGATAGTATTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATTTTTAAAAGAATCAAAGTCTTCACAAACCTAGGATAGTATTAT  838

seq1  CCAACAAAAAATGTTATATTCATACTCATTCTTGAGTTTTATTGATGAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAAAAATGTTATATTCATACTCATTCTTGAGTTTTATTGATGAAT  888

seq1  TTGTAATTAGGCACAGCGTTCTCCATTACATAACAGACAAGAGAACAAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTAGGCACAGCGTTCTCCATTACATAACAGACAAGAGAACAAAG  938

seq1  CACTGATGGAGAGCGAACCATCCCTTCCTGCTCTGGCACAGATCCTTCCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATGGAGAGCGAACCATCCCTTCCTGCTCTGGCACAGATCCTTCCT  988

seq1  CAGAATGGACCAGGTTGGATCATACAAGAGGCCCATTTGCCAGAGACTGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGGACCAGGTTGGATCATACAAGAGGCCCATTTGCCAGAGACTGG  1038

seq1  ATTTTCATAATGTGAGCCATTCTTTCTAATTGTAATTACAGATAATGTTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATAATGTGAGCCATTCTTTCTAATTGTAATTACAGATAATGTTG  1088

seq1  CTGGGAGAACTGAAGACACATTGAATAATGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  CTGGGAGAACTGAAGACACATTGAATAATGAATTC  1123


seq1: chr2_8065670_8066811
seq2: B6Ng01-105P10.g_66_1187

seq1  GAATTCTTTGTATCCTGATTCTATTCTTGATTCTTCTTCTTGGAGTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTATCCTGATTCTATTCTTGATTCTTCTTCTTGGAGTAAAA  50

seq1  TTTTCCACTGTTTTTCAGTGACTTGTATTGAATTACTTCATGTCATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACTGTTTTTCAGTGACTTGTATTGAATTACTTCATGTCATCTTT  100

seq1  AAATGTAAAACAAAACAAAACAAACAAAACAACATGACATCTTCAGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAAACAAAACAAAACAAACAAAACAACATGACATCTTCAGTCCT  150

seq1  TAAACTCTTAGAAACTTCTTCTGCTTTGAGCTCTTTTAGCTTTCTCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTTAGAAACTTCTTCTGCTTTGAGCTCTTTTAGCTTTCTCCAAT  200

seq1  AATAGAGTGTCTATTTTATCATTCCTTCCAGAAGCTACTATTAATCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTGTCTATTTTATCATTCCTTCCAGAAGCTACTATTAATCTTTC  250

seq1  CATTGATTCAATGGCCATGAAATTTTCCTCTATTTTCATCACAGTAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATTCAATGGCCATGAAATTTTCCTCTATTTTCATCACAGTAGATG  300

seq1  GTTGTGTTTCATTGAGGATGCAGGACTGTCAGGCTTCTAACATTCTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTTCATTGAGGATGCAGGACTGTCAGGCTTCTAACATTCTTCAA  350

seq1  AGAATTTTCTCCATTCCTTGTAGCCTGCATCATCAAGCAAAATTTCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTCTCCATTCCTTGTAGCCTGCATCATCAAGCAAAATTTCAGTT  400

seq1  GGATTCAATTGGATGCACTCACTTTCAGTGCTTAGTAAAGTCTGTAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAATTGGATGCACTCACTTTCAGTGCTTAGTAAAGTCTGTAGAGT  450

seq1  AAAATGATTGCCCACAGAGATAATTTCCCCTACTGTGTGTGTGTGTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATTGCCCACAGAGATAATTTCCCCTACTGTGTGTGTGTGTAACT  500

seq1  TTTAGGTGTTTGACAATTTCATGACAGTCTTTATCAATTCCTTATCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTGTTTGACAATTTCATGACAGTCTTTATCAATTCCTTATCAAAA  550

seq1  TGATGTAGCTAAATTTTCTCACCAGACTACATGGTAGCTGAATTTTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAGCTAAATTTTCTCACCAGACTACATGGTAGCTGAATTTTTCAC  600

seq1  TTGTGTTCTATTAGAGATGAATTGGTCTCCACATTCCATTTCAACTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTATTAGAGATGAATTGGTCTCCACATTCCATTTCAACTTATG  650

seq1  GACATTTTATTTTCTTGAGGTTTTATTGCAGTTATTACCTGGTGACTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTATTTTCTTGAGGTTTTATTGCAGTTATTACCTGGTGACTCAT  700

seq1  AGTCTTTCGTTATTGCTAGAAAATTCACTCTTGGTATATGGGGAGAGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCGTTATTGCTAGAAAATTCACTCTTGGTATATGGGGAGAGCTG  750

seq1  TCCTTTCTACCTTTCCACATTCTAGGAAAGGTCAATAAATATGTTCTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTACCTTTCCACATTCTAGGAAAGGTCAATAAATATGTTCTAAT  800

seq1  ATTGTGTCTAAGCACTACTTTGTTACAGTCAGAAAATTTGCCTGTAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTCTAAGCACTACTTTGTTACAGTCAGAAAATTTGCCTGTAAATA  850

seq1  AAGCCATGAAAATTTATAAGAGCCATGCCTGTAGCTTAGGGAACTTTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATGAAAATTTATAAGAGCCATGCCTGTAGCTTAGGGAACTTTTCA  900

seq1  GGATCTGTTCAGATGTCTGTTGATGCTTTTAAGTCTGTGCTATTCTGTCA  950
       ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  -GATCTGTTCAGATGTCTGTTGATGCTTTTAAGTCTGTGCTA-TCTGTCA  948

seq1  GAAATAAAGTCTATCATGTCACA-CAAATTATTTGGAAAATTATAAGATA  999
      ||||||||||||||||||| ||| |||||||||||||||| ||| |||||
seq2  GAAATAAAGTCTATCATGT-ACACCAAATTATTTGGAAAA-TAT-AGATA  995

seq1  CCCCCAAATGCTACTATTATCCAATAATTTGATTGTGATGAAATCTCAAA  1049
      ||||| |||||||||||||||| ||||||||||||||||| |||||||||
seq2  CCCCC-AATGCTACTATTATCC-ATAATTTGATTGTGATG-AATCTCAAA  1042

seq1  TAAGTTAGAGTATTATAGCTGTTTTGGGGGTTTGTATATTTCCCTAACCA  1099
      |||||   ||||||||||||||||  ||||||||| |||   ||||||||
seq2  TAAGTAGAAGTATTATAGCTGTTT--GGGGTTTGT-TAT---CCTAACCA  1086

seq1  GGTGGGAAATCTCTTCTGCAACTTAAAAAATGTTTCCCTAAGG  1142
      ||||   || ||||||||| ||| ||||    ||| |||||||
seq2  GGTG---AAACTCTTCTGCCACTAAAAA----TTTTCCTAAGG  1122


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