MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-106E13
Chromosome	2 (Build37)
Map Location	55,309,967 - 55,311,138
singlet/doublet	singlet
Overlap gene	Kcnj3
Upstream gene	Galnt13, LOC666936
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Galnt13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271786 MGI:2139447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666936 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Kcnj3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16519 MGI:104742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Galnt13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677927 GeneID:271786 MGI:2139447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 transcript_id : NM_173030.2

name	Kcnj3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680531 GeneID:16519 MGI:104742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 3 transcript_id : NM_008426.1

name	Galnt13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76677928 CCDS:CCDS16041.1 GeneID:271786 MGI:2139447
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IDA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006493 - protein amino acid O-linked glycosylation [Evidence IDA] codon_start : 1 note : pp-GalNAc-T13; UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 13 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 protein_id : NP_766618.2

name	Kcnj3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680532 CCDS:CCDS16042.1 GeneID:16519 MGI:104742
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0015467 - G-protein activated inward rectifier potassium channel activity [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium inwardly-rectifying channel J3 protein_id : NP_032452.1

name	LOC666936 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666936
definition	number : 1 pseudo : _no_value

name	LOC666936 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666936
definition	number : 2 pseudo : _no_value

clone name	MSMg01-468G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340I01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-060L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074F13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-388C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378M18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-260N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338N10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-341H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399H15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-071N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029D03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-106E13.b	B6Ng01-106E13.g
ACC	DH914066	DH914067
length	1,169	1,189
definition	DH914066\|Mus musculus domesticus DNA, BAC clone: B6Ng01-106E13, 5' end.	DH914067\|Mus musculus domesticus DNA, BAC clone: B6Ng01-106E13, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaggtcagatttgacaagaaacacttttgcccactgaggtagctt gctgctctatgaactgcaatgaatcttttaaaataaaaagaatccaatgt actactacttatatttagaaagtatcattacttgtatatatgcataggac gtgtgtaggttggaggagggaagcctttgtggaaggtacatgaaagttag aggagactgctgtccaataggttctctagttttacctttatttaggttct ggtgtttgatctcagatcttcagacttgcctggctgtcactttcccactg agtcatctcactgtccctcaattgcaatatattatgaataaagtttctac attggcacctgttaaatctgaaggagaacacagctcttaaatttgttcca tcttcagagattgtgtcgattcagactgtgctgatcaatgtagccaaatg caaattaatgtgggaagaaaacagtgaaaaacaggggtatgaattaaaat gtgttgctgctcatcatcctaactatgaacaagatgtgacatctattgtg gaacatggtgtaaagatgtgacatagatgccaaacaagagtgctgatgcc actcacgggtggaaacttgctgaatactcattagatgcagaacaccatgt gcaattatttactgatgcacacgagggaatagcattatgcttaagataaa gttcagaaagatggctttcatttcacaagttaacaaacattggcaattat tcaatgccaaaccattttgtacctttctttcctgaggacaaatttggaga gatagcacagattaaagatgaaaatgcttttaatagacaacgatagcaaa cggattagattttagatttagatagagtgaatgtagtttgacaaattagg actccagcacaatttgacagtgtcttactctgataagttttttactctgt tattttcatgccttaggctgtgtctgagaaaaagctaagatcagggacct actcagctcattgtggggacattagcatgcaaattccagtggataccagt gctactgtttcattgttactgctcaaaacaagcaccaaagcaaactaaca tggaggtatttagaatctgtgaacatcttagtattattcattacagtctc aaagtgtcatcaagtatgg	gaattcaagaagttagactccagagaaccaaataaccctatttaaaatgg gttacagctccaccaaaagaattctcaactgaggaatacataaggaaatg ttcaacatccttagttatcagggaaatgaaaatcaaaacaactctgagat ttcacctcacaccagtcagaatggctaagatcaagacctcaggtggcagc acatgctggtaaggatgtggagaaagaggaacactcctccattgctggtg ggattgcaatctggtacaacccctctggaaagcattttatcagttcctca gaaaattggacatagtactacctgaggacccagcaataccactcctgggc atatacccagaagatgctccaacatgcaataaggacacatgctccactat attcattcatagcagccttatttagagtagccagaacctggaaagaaacc agatgtccctcaacaaaggaacggatacagaaaatgtggtacatatacac aatcaaatactactcaggtatttaagaagagaaaaaaaaaacaatgaatt tatgaagatctttggcaaatggattagaaatagaaaacatcatcctgagt gaagtaacccaatcacaaaagaatacaaggtatgtactctctgataagtg aatattagcctagaagctcagaatacccaagatacaatttagagaccaca tgaacctcaagaagaaggaagagcagagggtagatttggttcttcttaga agtggggacaaagtacccatggaaggagttacagagacaaagtgtggagc agagatggaaggaaaggccatccagagaccaccaaacgtcgatatctttt ttatatatagtcacaaacccagacactattgtgggatgctacacgtgttt gctgatagaacctgatatagctgtctccttgagaggctctaccagtgcct gaaaattgcagtgttgagtatgtcagcccaccaatggactgagccacagg ttctcatgagggcctagagtaggactcagaagtgaagaggttgcagctca tatgaggacacatatgaatactcagaaactcaagcttctgggatcaacat caccaacagtacatgaaggattcaggttccatctattgagcaagagcctg tggtcatatggagagcaggctatttctgtaggctctgac
quality values	Open. Hide. 61 61 45 43 61 38 21 55 47 35 43 29 55 47 38 61 61 47 61 61 55 49 61 61 23 24 31 12 36 31 36 37 44 32 55 59 61 38 61 61 61 61 61 59 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 44 37 59 59 59 59 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 59 61 59 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 50 61 61 61 61 61 45 61 61 61 53 61 61 61 53 53 61 53 61 61 61 52 61 61 61 39 61 61 61 50 61 61 61 53 50 61 53 53 57 57 57 57 57 57 57 57 53 57 53 53 53 53 53 57 45 57 53 53 52 47 38 53 53 43 50 57 43 47 47 42 47 42 57 57 53 57 47 42 53 53 53 53 57 57 47 45 53 53 53 53 47 52 53 38 50 30 53 53 47 16 57 53 46 38 45 38 45 53 52 53 53 45 52 57 52 47 41 45 52 39 47 34 32 57 47 40 52 47 38 52 15 57 33 41 32 50 21 53 53 33 41 57 41 40 31 40 57 34 40 25 53 50 46 53 45 53 40 53 45 28 57 53 37 37 52 52 52 29 38 42 52 42 52 33 47 52 28 9 47 39 50 28 47 30 53 35 50 53 32 52 53 57 41 31 38 32 20 37 32 53 29 34 40 57 37 27 40 38 37 52 10 21 32 18 27 53 36 53 57 42 52 44 39 24 53 35 32 23 40 23 33 35 37 40 31 23 13 41 33 53 53 27 37 29 32 30 57 57 37 36 37 35 33 57 57 40 33 21 30 37 29 27 28 27 26 30 19 31 29 34 24 45 21 57 17 21 32 29 13 7 46 29 13 30 27 51 51 34 28 18 29 14 46 46 36 22 30 27 25 27 31 32 27 36 29 34 24 22 14 29 35 33 51 26 29 25 25 25 30 14 20 22 11 10 7 27 17 23 9 33 10 16 37 24 29 14 18 32 33 19 18 21 27 15 35 28 35 16 17 32 7 20 21 12 16 18 28 27 24 5 6 4 12 46 46 39 43 39 18 33 22 26 23 26 12 14 25 29 51 51 33 26 17 28 29 21 24 32 9 8 16 28 15 20 28 10 19 29 33 17 29 28 10 39 51 51 51 27 11 27 30 39 28 8 13 14 23 13 16 38 33 18 19 27 25 23 24 28 23 17 19 29 20 27 14 23 23 27 23 31 51 44 24 12 12 16 28 31 21 7 8 16 22 33 19 20 38 22 16 18 9 17 19 8 5 22 23 34 17 7 14 30 19 7 9 22 24 27 16 21 12 12 16 51 12 19 20 30 27 19 13 18 9 13 9 30 23 33 19 19 35 44 18 10 8 32 19 27 10 28 23 10 29 11 4 13 12 35 14 30 17 21 15 24 10 29 15 9 28 5 6 21 8 14 7 14 13 8 16 28 26 29 6 4 6 16 7 7 6 7 7 9 26 5 3 4 4 5 22 15 3 7 18 6 5 12 11 5 14 13 5 4 9 6 13 6 14 23 4 4 5 2 4 5 7 10 21 27 6 5 11 5 14 19	Open. Hide. 61 47 52 49 18 12 15 11 10 18 12 8 15 19 11 52 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 41 43 37 30 43 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 59 61 61 61 59 59 59 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 59 59 55 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 53 61 61 61 61 61 61 61 53 61 46 50 50 61 61 61 61 61 61 61 61 61 61 61 61 53 53 61 61 61 61 61 47 61 61 61 50 61 61 61 61 61 47 43 53 61 61 61 61 61 45 61 61 61 61 61 61 52 52 61 61 39 61 61 61 47 61 47 61 61 61 53 47 52 53 53 47 53 53 53 53 57 57 53 53 57 57 57 52 35 39 46 47 47 47 47 47 57 57 50 53 42 57 57 53 39 57 52 50 53 47 43 43 43 57 45 50 57 53 40 50 47 53 53 52 53 53 57 47 32 53 53 40 47 52 33 42 42 40 38 53 38 21 37 57 50 52 19 57 47 45 52 52 36 47 28 47 43 38 42 39 47 39 21 47 50 41 30 28 47 38 23 47 57 45 29 40 57 42 31 26 53 42 50 30 53 31 29 26 19 53 50 42 40 50 27 29 41 27 41 47 12 53 34 52 24 53 28 37 45 24 52 9 57 37 16 50 38 36 24 57 34 47 42 23 52 42 44 42 42 42 53 36 24 47 41 23 36 39 57 57 52 37 24 30 57 52 18 16 11 6 12 12 24 19 29 52 33 53 22 57 33 30 15 33 29 40 27 37 41 21 31 24 24 37 34 28 33 29 10 26 10 37 12 18 20 6 41 20 37 34 29 31 28 27 16 40 40 34 13 10 20 20 23 22 31 14 44 17 16 45 17 29 10 28 17 24 26 32 36 30 26 25 25 23 5 19 23 21 18 11 9 8 8 8 5 19 18 14 24 35 28 30 28 12 9 14 18 32 11 32 11 21 38 34 14 21 29 24 13 21 18 21 15 39 11 13 16 45 10 30 18 23 20 20 29 25 19 28 23 38 16 13 46 32 21 20 28 23 14 12 29 13 29 31 18 17 18 24 23 20 29 29 23 11 8 5 17 10 18 14 8 22 7 12 24 26 7 28 28 25 11 22 20 27 20 29 26 11 10 14 22 11 22 22 21 28 27 18 26 7 6 11 6 6 5 5 8 5 5 14 15 12 5 10 24 18 6 32 15 9 6 15 22 16 10 20 8 15 21 21 24 9 15 20 20 24 14 6 10 5 8 10 20 31 29 19 20 8 11 36 12 23 24 10 51 21 12 16 22 10 6 7 7 13 33 5 12 10 8 18 19 6 5 8 15 7 29 9 31 25 5 16 8 16 5 26 12 14 14 7 13 5 23 6 8 11 15 10 7 12 5 23 12 19 17 10 4 11 20 14 38 9 22 6 6 17 19 7 9 19 32 32 10 8 13 5 7 5 14 14 5 29 17 17 28 9 17 17 21 14 8 25 6 6 16 10 14 18 14 24 7 9 3 3 4 4 4 4 7 6 5 7 14 3 4 4 5 6 3 9 6 4 3 6 3 1 4 4 2 7 8 3 4 5 4 4 4 3 2 2 2 3 16 10 4 27 26 16 10 13 18 8 7 17 4 9 3 14 5 3 5 4 3 6 6 6 6 4 1 3 3 3 4 7 6 20 5 5 4 11 8 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_55309967_55311138
seq2: B6Ng01-106E13.b_46_1214

seq1  GAATTCAGGTCAGATTTGACAAGAAACACTTTTGCCCACTGAGGTAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCAGATTTGACAAGAAACACTTTTGCCCACTGAGGTAGCTT  50

seq1  GCTGCTCTATGAACTGCAATGAATCTTTTAAAATAAAAAGAATCCAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTATGAACTGCAATGAATCTTTTAAAATAAAAAGAATCCAATGT  100

seq1  ACTACTACTTATATTTAGAAAGTATCATTACTTGTATATATGCATAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTACTTATATTTAGAAAGTATCATTACTTGTATATATGCATAGGAC  150

seq1  GTGTGTAGGTTGGAGGAGGGAAGCCTTTGTGGAAGGTACATGAAAGTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGGTTGGAGGAGGGAAGCCTTTGTGGAAGGTACATGAAAGTTAG  200

seq1  AGGAGACTGCTGTCCAATAGGTTCTCTAGTTTTACCTTTATTTAGGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACTGCTGTCCAATAGGTTCTCTAGTTTTACCTTTATTTAGGTTCT  250

seq1  GGTGTTTGATCTCAGATCTTCAGACTTGCCTGGCTGTCACTTTCCCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTGATCTCAGATCTTCAGACTTGCCTGGCTGTCACTTTCCCACTG  300

seq1  AGTCATCTCACTGTCCCTCAATTGCAATATATTATGAATAAAGTTTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCTCACTGTCCCTCAATTGCAATATATTATGAATAAAGTTTCTAC  350

seq1  ATTGGCACCTGTTAAATCTGAAGGAGAACACAGCTCTTAAATTTGTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCACCTGTTAAATCTGAAGGAGAACACAGCTCTTAAATTTGTTCCA  400

seq1  TCTTCAGAGATTGTGTCGATTCAGACTGTGCTGATCAATGTAGCCAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGAGATTGTGTCGATTCAGACTGTGCTGATCAATGTAGCCAAATG  450

seq1  CAAATTAATGTGGGAAGAAAACAGTGAAAAACAGGGGTATGAATTAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAATGTGGGAAGAAAACAGTGAAAAACAGGGGTATGAATTAAAAT  500

seq1  GTGTTGCTGCTCATCATCCTAACTATGAACAAGATGTGACATCTATTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGCTGCTCATCATCCTAACTATGAACAAGATGTGACATCTATTGTG  550

seq1  GAACATGGTGTAAAGATGTGACATAGATGCCAAACAAGAGTGCTGATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGTGTAAAGATGTGACATAGATGCCAAACAAGAGTGCTGATGCC  600

seq1  ACTCACGGGTGGAAACTTGCTGAATACTCATTAGATGCAGAACACCATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACGGGTGGAAACTTGCTGAATACTCATTAGATGCAGAACACCATGT  650

seq1  GCAATTATTTACTGATGCACACGAGGGAATAGCATTATGCTTAAGATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTATTTACTGATGCACACGAGGGAATAGCATTATGCTTAAGATAAA  700

seq1  GTTCAGAAAGATGGCTTTCATTTCACAAGTTAACAAACATTGGCAATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAAGATGGCTTTCATTTCACAAGTTAACAAACATTGGCAATTAT  750

seq1  TCAATGCCAAACCATTTTGTACCTTTCTTTCCTGAGGACAAATTTGGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCCAAACCATTTTGTACCTTTCTTTCCTGAGGACAAATTTGGAGA  800

seq1  GATAGCACAGATTAAAGATGAAAATGCTTTTAATAGACAACGATAGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCACAGATTAAAGATGAAAATGCTTTTAATAGACAACGATAGCAAA  850

seq1  CGGATTAGATTTTAGATTTAGATAGAGTGAATGTAGTTTGACAAATTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATTAGATTTTAGATTTAGATAGAGTGAATGTAGTTTGACAAATTAGG  900

seq1  ACTCCAGCACAATTTGACAGTGTCTTACTCTGATTAGTTTTTTTACTCTG  950
      |||||||||||||||||||||||||||||||||| || ||||||||||||
seq2  ACTCCAGCACAATTTGACAGTGTCTTACTCTGATAAG-TTTTTTACTCTG  949

seq1  TTATTTTCATGCCTTAGGCTGTGTCTGAGAAAAAGCTAAGATCAGGGACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCATGCCTTAGGCTGTGTCTGAGAAAAAGCTAAGATCAGGGACC  999

seq1  TACTCAGCTCATTGTGGGGACATTAGCATGCAAATTCCAGTGGATACCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGCTCATTGTGGGGACATTAGCATGCAAATTCCAGTGGATACCAG  1049

seq1  TGCTACTGTTTCATTGTTACTGCTCAAAACAAGCACCAAAGCAAACTAAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTGTTTCATTGTTACTGCTCAAAACAAGCACCAAAGCAAACTAAC  1099

seq1  ATGAAGTTATTTTAGAATCTGTG-ACATCTTAGTATTTATTCATATCAGT  1149
      ||| || || ||||||||||||| ||||||||||| ||||||||  ||||
seq2  ATGGAGGTA-TTTAGAATCTGTGAACATCTTAGTA-TTATTCATTACAGT  1147

seq1  CTCAAAGTGGCATCAAAGTATGG  1172
      ||||||||| |||| ||||||||
seq2  CTCAAAGTGTCATC-AAGTATGG  1169

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information