BAC Information

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BAC

Clone NameB6Ng01-106I15
Chromosome2 (Build37)
Map Location 50,481,837 - 50,483,001
singlet/doubletsinglet
Overlap genenone
Upstream geneKif5c, 2310010M24Rik, Lypd6, 2010311D03Rik, LOC666781
Downstream geneLOC227885, Rnd3, LOC666802, LOC666810, LOC100041614
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106I15.bB6Ng01-106I15.g
ACCDH914250DH914251
length1,1561,168
definitionDH914250|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I15, 5' end.DH914251|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagaaattcagatcgaaatactagacagtgagagaggttctca
gaatattctgtgacatgaataagagtccgcatgacatcagactcatcatt
gttatactgaaggggtacgtaagtcaaccaaagcacaacttgcaggcagc
aaaagagagtgaaaccagttcacaggcttgcaggtgtctgcttctgtctc
cctggatgctcttagtttctccagcaatggatggacaactacggttaaga
gtgtcctagggaagctccttcagggagccactggtgaccagccatggggg
acatgtcaagtaggcgctctctgcctaggacatacccaaatcctagaatg
tccaaaggaatgtctttaacggctgcaacattgaagaaatagcctgggaa
cagtgggccacagttgtggacaggcatgctggaaacccactgcggattca
ctgtcagaatccctaaaagatgttgttggaagtaggattttctaaaaata
ttaatatcaggcctgcagtattactcttcctcccatacaaatggtagttt
tttttaagtataaagatgaaacaaaagataagtgtgtggcaaagttggca
taaggagagatatgtagattaatggagcagaataatgaatctaaaaatat
actcatatattcagtaacctggaggatgttttaaagcaattcagcaggaa
gagccttctaataaatggtgcaggaattgctacaggttcatacataaagt
gatgaatttctcttttaacccagcatggcatttgaatataaagtcaaaaa
ttctcacaggcctaacgtaagaactaaaagactaacatttcctgaatatt
cagaagagaaaatcctagtgaacttgggttatgcaacaccttcaacaccc
aaaacatgaactgctaatgacaaatgaggaattgttcttcatcaaaacta
aaacttttaccctttgaagacatgagaagtaaaagagtgagttacagtgt
ttaatatagttatattatgcaggtgtctattaattgcatacaaaaatgtt
gtatacccatactagcaattgtgtatacgatctgtttttaatctgtggat
tcattaaatagtggaattcccatttgatcattggaagagttgagacgttt
gacagt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaaa
catagaagtggatgctcacagtcggctattggatggatcacatggccccc
atgaaggagctagagaaagtaccaaagagctaagggatctgcaccctata
gtggacacattatgaactaaccagtaccccggagctctgactctagctgc
atatgcatcaaagaatggcttagtcgtcatcacttgaaagagggccaatg
gactgctaacttttatgccccagtacaggtacggcaggcataaaagggaa
gtggtgggataaggacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50481837_50483001
seq2: B6Ng01-106I15.b_47_1202

seq1  GAATTCACAGAAATTCAGATCGAAATACTAGACAGTGAGAGAGGTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAAATTCAGATCGAAATACTAGACAGTGAGAGAGGTTCTCA  50

seq1  GAATATTCTGTGACATGAATAAGAGTCCGCATGACATCAGACTCATCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTCTGTGACATGAATAAGAGTCCGCATGACATCAGACTCATCATT  100

seq1  GTTATACTGAAGGGGTACGTAAGTCAACCAAAGCACAACTTGCAGGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATACTGAAGGGGTACGTAAGTCAACCAAAGCACAACTTGCAGGCAGC  150

seq1  AAAAGAGAGTGAAACCAGTTCACAGGCTTGCAGGTGTCTGCTTCTGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAGTGAAACCAGTTCACAGGCTTGCAGGTGTCTGCTTCTGTCTC  200

seq1  CCTGGATGCTCTTAGTTTCTCCAGCAATGGATGGACAACTACGGTTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATGCTCTTAGTTTCTCCAGCAATGGATGGACAACTACGGTTAAGA  250

seq1  GTGTCCTAGGGAAGCTCCTTCAGGGAGCCACTGGTGACCAGCCATGGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTAGGGAAGCTCCTTCAGGGAGCCACTGGTGACCAGCCATGGGGG  300

seq1  ACATGTCAAGTAGGCGCTCTCTGCCTAGGACATACCCAAATCCTAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCAAGTAGGCGCTCTCTGCCTAGGACATACCCAAATCCTAGAATG  350

seq1  TCCAAAGGAATGTCTTTAACGGCTGCAACATTGAAGAAATAGCCTGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGAATGTCTTTAACGGCTGCAACATTGAAGAAATAGCCTGGGAA  400

seq1  CAGTGGGCCACAGTTGTGGACAGGCATGCTGGAAACCCACTGCGGATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGCCACAGTTGTGGACAGGCATGCTGGAAACCCACTGCGGATTCA  450

seq1  CTGTCAGAATCCCTAAAAGATGTTGTTGGAAGTAGGATTTTCTAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAATCCCTAAAAGATGTTGTTGGAAGTAGGATTTTCTAAAAATA  500

seq1  TTAATATCAGGCCTGCAGTATTACTCTTCCTCCCATACAAATGGTAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCAGGCCTGCAGTATTACTCTTCCTCCCATACAAATGGTAGTTT  550

seq1  TTTTTAAGTATAAAGATGAAACAAAAGATAAGTGTGTGGCAAAGTTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTATAAAGATGAAACAAAAGATAAGTGTGTGGCAAAGTTGGCA  600

seq1  TAAGGAGAGATATGTAGATTAATGGAGCAGAATAATGAATCTAAAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGAGATATGTAGATTAATGGAGCAGAATAATGAATCTAAAAATAT  650

seq1  ACTCATATATTCAGTAACCTGGAGGATGTTTTAAAGCAATTCAGCAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATATTCAGTAACCTGGAGGATGTTTTAAAGCAATTCAGCAGGAA  700

seq1  GAGCCTTCTAATAAATGGTGCAGGAATTGCTACAGGTTCATACATAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTCTAATAAATGGTGCAGGAATTGCTACAGGTTCATACATAAAGT  750

seq1  GATGAATTTCTCTTTTAACCCAGCATGGCATTTGAATATAAAGTCAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATTTCTCTTTTAACCCAGCATGGCATTTGAATATAAAGTCAAAAA  800

seq1  TTCTCACAGGCCTAACGTAAGAACTAAAAGACTAACATTTCCTGAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAGGCCTAACGTAAGAACTAAAAGACTAACATTTCCTGAATATT  850

seq1  CAGAAGAGAAAATCCTAGTGAACTTGGGTTATGCAAACACCTTCAACACC  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGAAGAGAAAATCCTAGTGAACTTGGGTTATGC-AACACCTTCAACACC  899

seq1  CAAAACATGAACTGCTAATGACAAATGAGGAATTGTTCTTCATCAAAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATGAACTGCTAATGACAAATGAGGAATTGTTCTTCATCAAAACT  949

seq1  AAAACTTTTACCCTTTGAAAGACATGAGGAAGTAAAAAGAGTGAGTTACA  1000
      ||||||||||||||||| ||||||||| ||||| ||||||||||||||| 
seq2  AAAACTTTTACCCTTTG-AAGACATGA-GAAGT-AAAAGAGTGAGTTAC-  995

seq1  AGTGTTT-ATATAGGTTATA-TATGCAAGTGTCTATTATATGCATACAAA  1048
      ||||||| ||||| |||||| |||||| ||||||||||  ||||||||||
seq2  AGTGTTTAATATA-GTTATATTATGCAGGTGTCTATTAATTGCATACAAA  1044

seq1  AATGTTGTATACACATAACTAGCAA-TGTGTATAACGATCTGTTTTTAAA  1097
      |||||||||||| ||| |||||||| ||||||| ||||||||||||| ||
seq2  AATGTTGTATACCCAT-ACTAGCAATTGTGTAT-ACGATCTGTTTTT-AA  1091

seq1  TCTGT-GATTCAATAAAATAGTGGAATTCACATTTGATCATGGGAAAGAG  1146
      ||||| ||||| || |||||||||||||| ||||||||||| || |||||
seq2  TCTGTGGATTC-ATTAAATAGTGGAATTCCCATTTGATCATTGG-AAGAG  1139

seq1  TTGAGAAGAGTTTGACAGT  1165
      ||||||   ||||||||||
seq2  TTGAGA--CGTTTGACAGT  1156