BAC Information

Click to search

BAC

Clone NameB6Ng01-107C17
Chromosome2 (Build37)
Map Location 67,521,153 - 67,704,753
singlet/doubletdoublet
Overlap geneLOC621171
Upstream geneScn7a, LOC383707, LOC100039540, Gm1322, Cmya3
Downstream geneLOC227995, B3galt1, Stk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107C17.bB6Ng01-107C17.g
ACCDH914710DH914711
length1,0561,116
definitionDH914710|Mus musculus domesticus DNA, BAC clone: B6Ng01-107C17, 5' end.DH914711|Mus musculus domesticus DNA, BAC clone: B6Ng01-107C17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,521,153 - 67,522,215)(67,703,623 - 67,704,753)
sequence
gaattccacgtgtaattcataataggtgttcaacattcttttgcaaacag
tactgttggttgtatgtaaggccataaataaagctgtttcctgcatccct
acattcttttcttctttctttcccttccatctgagtaaaggactatggga
ggaaactatgggagaactatgggaggctgtctagagtgcctcttactgtg
cttgaggtatactgtgtggtgtttgtcattcttaagtagctgtaatatcc
cagacattgtcttagccttgggtgggtaggatgtctccattcatgtcaca
ctgtagaaatgactcaatgtttatcttgccctactaagaaaaaggaaagc
attagatgagaggctgcggtgtttaatcacgagttcttctcaaaatgatg
attgcttgtatttattgtcacaagaccaaaaaaaaaaaaaaaaaaaaaaa
ctaaagcataaatagaaaattatattttctgaactaagatgtcttcagtg
ttatttaaaatgcacataaaccacatcactaagtgagtattaatatttaa
tcatttttataaatataacaaatacctttaaatttcctttacaagaattt
ttgcgtttacacattttactaataaacagatatatatcaatttcttagat
agcttttatgtgtccatcataatagaagatgctaacaatacagtggacat
attggagacagctcctctgcctgtaaatagagcaagtatgtaaggcaaat
atggatgatgttgctaagatgtatcagatagcctcttcaactctgaaata
cagcaagataattgtgtttggtgttttcaatggttgatgtctttattcac
caccattggtcagaaacattcccctgggttcgattgtgtacaaccaatgt
gtctgataatatcatttcccagtggggtttaaaaggactacattatataa
agtatcagactggactaaagccaccactataatgagatggctggttttaa
gcaaatgtattttttccctttggaattgttctggaaatttagaggcatta
aatatc
gaattcttacttccacacatttacaaatgggttcttagagaattactaag
attaaatagactgtatacctacctttgtttttgaacatctgaccccaaat
ttcaacattatttcagaaagacttttacttcttttaaatatcttctcact
tttatcatctattcaggaattactttaattagaagggttttctggtgtca
aaggctttgctattgattatgaagaacacaagtttcataagtattctaga
caaattaattttaaaagaaaatatgtatttattaatttactttgtttttg
ttctcaatagatatacatgtaatacacaaagattaataattttataattg
tactttgtttttgtaacacctacacattaatttaatttaaattaattttt
tgaaatttcagaaacaggttgactaagaatagcactaatgaccttggttt
tatcctacatttaaaatatatgacattcatatttctttgtttcctaggtt
ctgatagattgtaatgtccagaaaaaataggatattttttcttaatttgc
caaaaaatgttgagttttaagtaattcattaaaattttctttgtagaaaa
aagtaattttcttagagcaaaccatagtttctgataataattttaaatta
attttactatttttgctttaaattatatataaattataatatatttataa
taaacaatatataatataataaatataataaagtataatttatatataat
caatagcaaaatgataaagtatatgtaaattatattatatataaattaaa
ttatatatatgtgtgtgttatgtctgtgtatctgtgtgtgagtatttgca
tatgagtgtaggttactatagaaaccagatgtgtcagattacactgaagg
aggactcacagtggttgcaaggcacctgaactggctctggaaaccaaatt
ctggtcactgaaagagtagtatatactcatttggttggttggtcgtgatc
ggttaatttgagatagaatttctctggtatcctggctgcccagctgcctg
aaatcagaatttctggctaccttgcttccagtgctggaatctaggagaat
acaccactcagtattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_67521153_67522215
seq2: B6Ng01-107C17.b_46_1101

seq1  GAATTCCACGTGTAATTCATAATAGGTGTTCAACATTCTTTTGCAAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGTGTAATTCATAATAGGTGTTCAACATTCTTTTGCAAACAG  50

seq1  TACTGTTGGTTGTATGTAAGGCCATAAATAAAGCTGTTTCCTGCATCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTGGTTGTATGTAAGGCCATAAATAAAGCTGTTTCCTGCATCCCT  100

seq1  ACATTCTTTTCTTCTTTCTTTCCCTTCCATCTGAGTAAAGGACTATGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTTTTCTTCTTTCTTTCCCTTCCATCTGAGTAAAGGACTATGGGA  150

seq1  GGAAACTATGGGAGAACTATGGGAGGCTGTCTAGAGTGCCTCTTACTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTATGGGAGAACTATGGGAGGCTGTCTAGAGTGCCTCTTACTGTG  200

seq1  CTTGAGGTATACTGTGTGGTGTTTGTCATTCTTAAGTAGCTGTAATATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTATACTGTGTGGTGTTTGTCATTCTTAAGTAGCTGTAATATCC  250

seq1  CAGACATTGTCTTAGCCTTGGGTGGGTAGGATGTCTCCATTCATGTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATTGTCTTAGCCTTGGGTGGGTAGGATGTCTCCATTCATGTCACA  300

seq1  CTGTAGAAATGACTCAATGTTTATCTTGCCCTACTAAGAAAAAGGAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAAATGACTCAATGTTTATCTTGCCCTACTAAGAAAAAGGAAAGC  350

seq1  ATTAGATGAGAGGCTGCGGTGTTTAATCACGAGTTCTTCTCAAAATGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATGAGAGGCTGCGGTGTTTAATCACGAGTTCTTCTCAAAATGATG  400

seq1  ATTGCTTGTATTTATTGTCACAAGACCAAAAAAAAAAAAAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTGTATTTATTGTCACAAGACCAAAAAAAAAAAAAAAAAAAAAAA  450

seq1  CTAAAGCATAAATAGAAAATTATATTTTCTGAACTAAGATGTCTTCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCATAAATAGAAAATTATATTTTCTGAACTAAGATGTCTTCAGTG  500

seq1  TTATTTAAAATGCACATAAACCACATCACTAAGTGAGTATTAATATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAAATGCACATAAACCACATCACTAAGTGAGTATTAATATTTAA  550

seq1  TCATTTTTATAAATATAACAAATACCTTTAAATTTCCTTTACAAGAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTATAAATATAACAAATACCTTTAAATTTCCTTTACAAGAATTT  600

seq1  TTGCGTTTACACATTTTACTAATAAACAGATATATATCAATTTCTTAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGTTTACACATTTTACTAATAAACAGATATATATCAATTTCTTAGAT  650

seq1  AGCTTTTATGTGTCCATCATAATAGAAGATGCTAACAATACAGTGGACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTATGTGTCCATCATAATAGAAGATGCTAACAATACAGTGGACAT  700

seq1  ATTGGAGACAGCTCCTCTGCCTGTAAATAGAGCAAGTATGTAAGGCAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGACAGCTCCTCTGCCTGTAAATAGAGCAAGTATGTAAGGCAAAT  750

seq1  ATGGATGATGTTGCTAAGATGTATCAGATAGCCTCTTCAACTCTGAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGATGTTGCTAAGATGTATCAGATAGCCTCTTCAACTCTGAAATA  800

seq1  CAGCAAGATAATTGTGTTTGGTGTTTTCAATGGTTGATGTCTTTATTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGATAATTGTGTTTGGTGTTTTCAATGGTTGATGTCTTTATTCAC  850

seq1  CACCATTGGTCAGAAACATTCCCCTGGGTTCGATTGTGTAACAACCAATG  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CACCATTGGTCAGAAACATTCCCCTGGGTTCGATTGTGT-ACAACCAATG  899

seq1  TGTCTGATAATATCATTTCCCAGTGGGGTTTAAAAGAACTACATTATATA  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTCTGATAATATCATTTCCCAGTGGGGTTTAAAAGGACTACATTATATA  949

seq1  AAGTTATCAGACTGGACTAAAGCCACCACTATAATGAGAATGGCTGGTTT  1000
      ||| |||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAG-TATCAGACTGGACTAAAGCCACCACTATAATGAG-ATGGCTGGTTT  997

seq1  TAAGCAAAATGTATTTTTTCCCTTTGGAATTTGTTCTGAAAATTTAAAAG  1050
      ||||| ||||||||||||||||||||||| |||||||| |||||| | ||
seq2  TAAGC-AAATGTATTTTTTCCCTTTGGAA-TTGTTCTGGAAATTT-AGAG  1044

seq1  GCAATTAAATATC  1063
      || ||||||||||
seq2  GC-ATTAAATATC  1056

seq1: chr2_67703623_67704753
seq2: B6Ng01-107C17.g_68_1183 (reverse)

seq1  GAATACTGAGTGTTGCTATGCTCCTTAGATTCCAGCACTTGGAAGGCAAA  50
      |||||||||||| || ||| |||| ||||||||||||| ||||||   ||
seq2  GAATACTGAGTGGTG-TATTCTCC-TAGATTCCAGCAC-TGGAAG--CAA  45

seq1  GGTAGGCAGATA-TCTGAGTTTCAGGCCAGCTGGGGCAGCCAGAGATACA  99
      ||||| |||| | ||||| ||||||| ||||| |||||||||| ||||| 
seq2  GGTAGCCAGAAATTCTGA-TTTCAGG-CAGCT-GGGCAGCCAG-GATAC-  90

seq1  CAGAGAAACTCTATCTCAAAATAAAACCGATCAACGAACCAACCAACCAA  149
      |||||||| ||||||||||| |  |||||||| ||| |||||||||||||
seq2  CAGAGAAATTCTATCTCAAATT--AACCGATC-ACG-ACCAACCAACCAA  136

seq1  ATGAGTATATACTACTCTTTCAGTGGACCAGAATTTGGTTTCCAGAGCCA  199
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGAGTATATACTACTCTTTCAGT-GACCAGAATTTGGTTTCCAGAGCCA  185

seq1  GTTCAGGTGCCTTGCAACCACCTGTGAGTCCTTCTTCAGTGTAATCTGAC  249
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  GTTCAGGTGCCTTGCAACCA-CTGTGAGTCCTCCTTCAGTGTAATCTGAC  234

seq1  ACATCTGGTTTCTATAGTAACCTACACTCATATGCAAATACTCACACACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGGTTTCTATAGTAACCTACACTCATATGCAAATACTCACACACA  284

seq1  GATACACAGACATAACACACACATATATATAATTTAATTTATATATAATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACAGACATAACACACACATATATATAATTTAATTTATATATAATA  334

seq1  TAATTTACATATACTTTATCATTTTGCTATTGATTATATATAAATTATAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTACATATACTTTATCATTTTGCTATTGATTATATATAAATTATAC  384

seq1  TTTATTATATTTATTATATTATATATTGTTTATTATAAATATATTATAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATATTTATTATATTATATATTGTTTATTATAAATATATTATAAT  434

seq1  TTATATATAATTTAAAGCAAAAATAGTAAAATTAATTTAAAATTATTATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATAATTTAAAGCAAAAATAGTAAAATTAATTTAAAATTATTATC  484

seq1  AGAAACTATGGTTTGCTCTAAGAAAATTACTTTTTTCTACAAAGAAAATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTATGGTTTGCTCTAAGAAAATTACTTTTTTCTACAAAGAAAATT  534

seq1  TTAATGAATTACTTAAAACTCAACATTTTTTGGCAAATTAAGAAAAAATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAATTACTTAAAACTCAACATTTTTTGGCAAATTAAGAAAAAATA  584

seq1  TCCTATTTTTTCTGGACATTACAATCTATCAGAACCTAGGAAACAAAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTTTTTCTGGACATTACAATCTATCAGAACCTAGGAAACAAAGAA  634

seq1  ATATGAATGTCATATATTTTAAATGTAGGATAAAACCAAGGTCATTAGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAATGTCATATATTTTAAATGTAGGATAAAACCAAGGTCATTAGTG  684

seq1  CTATTCTTAGTCAACCTGTTTCTGAAATTTCAAAAAATTAATTTAAATTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTAGTCAACCTGTTTCTGAAATTTCAAAAAATTAATTTAAATTA  734

seq1  AATTAATGTGTAGGTGTTACAAAAACAAAGTACAATTATAAAATTATTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATGTGTAGGTGTTACAAAAACAAAGTACAATTATAAAATTATTAA  784

seq1  TCTTTGTGTATTACATGTATATCTATTGAGAACAAAAACAAAGTAAATTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTATTACATGTATATCTATTGAGAACAAAAACAAAGTAAATTA  834

seq1  ATAAATACATATTTTCTTTTAAAATTAATTTGTCTAGAATACTTATGAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATACATATTTTCTTTTAAAATTAATTTGTCTAGAATACTTATGAAA  884

seq1  CTTGTGTTCTTCATAATCAATAGCAAAGCCTTTGACACCAGAAAACCCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTCTTCATAATCAATAGCAAAGCCTTTGACACCAGAAAACCCTT  934

seq1  CTAATTAAAGTAATTCCTGAATAGATGATAAAAGTGAGAAGATATTTAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAAAGTAATTCCTGAATAGATGATAAAAGTGAGAAGATATTTAAA  984

seq1  AGAAGTAAAAGTCTTTCTGAAATAATGTTGAAATTTGGGGTCAGATGTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAAAAGTCTTTCTGAAATAATGTTGAAATTTGGGGTCAGATGTTC  1034

seq1  AAAAACAAAGGTAGGTATACAGTCTATTTAATCTTAGTAATTCTCTAAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAGGTAGGTATACAGTCTATTTAATCTTAGTAATTCTCTAAGA  1084

seq1  ACCCATTTGTAAATGTGTGGAAGTAAGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  ACCCATTTGTAAATGTGTGGAAGTAAGAATTC  1116