BAC Information

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BAC

Clone NameB6Ng01-107G15
Chromosome2 (Build37)
Map Location 48,360,271 - 48,545,421
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383691, LOC100041457
Downstream geneLOC383692, Acvr2a, Orc4l, LOC100041508, Mbd5, LOC100042719, LOC666709, LOC435666, Epc2, Kif5c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107G15.bB6Ng01-107G15.g
ACCDH914889DH914890
length1,117860
definitionDH914889|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G15, 5' end.DH914890|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,360,271 - 48,361,400)(48,544,564 - 48,545,421)
sequence
gaattcagtctccataattatatggaggtgaggggtaacactaatttgct
ttttcccctatttatgatctagacctttagttacttatccccccaaaagt
ccctaccaagcccatgccagggttggcagatggcaaacttagagtcagta
gcatcttgaagctctccccaattgcatcagttccggaacctgaggctcct
agaattatactaactgcactgagattttcaaaaattgtgcattgtgcagt
cagaagcaaactgatatggaaattcacagtgaggcaaaatagaaagcatc
atctatcctcaaaactgcctttatgtttatgatttcatcaggaagggcaa
agttatagaaagataatggtatcatttgttctcaaaagcaggtttatacc
tgtgactacatatgacttaagttagtttaaacactgtaatctcctttcat
gcatttttaaatttttaatttgtgtttaaaatatttagatggcttccttg
tgcccatgaataaataatcttatatatgcattttttttgcccacttagca
ggaaatgatctatattttctttctcttggtatctttcaaatctcagcttt
cctgggatctctggagaggaaacacagactttctttctgcttgtctcttt
cttgttccaattccagatctgtaaagcagtaagacagtgagtggtcctta
ggaaaaagaaagatttggaaggggaagcttggcactatgcagattccgga
agaatggggaaccagatgttgaagtaccctgaggcaagaaatggctcctg
gcctctagcactcactagtcagttgccttgcggtactgtgctggtgtatc
caagaaaatcttacaccagctctttctttcccagagaacaagcatctaca
gttatgaataaaaattcctccatgcttcatctggagaactagtatggagg
accaagctccttgtgatgactgaattctcaaaatgagcatgaaagaagaa
tgagaaaaagtgagagttggaggccagcactgatacagaatggggcaaca
ggagtcatgcctcgaccacacttatttgcacagggatctcttagttacca
ccgtaaggctacagcca
gaattcaaacctagcggcaacagatgaagagctgaagtgtggagagatct
tagcaccagagaattactgatttgggcctctgcctcatgtgagcagggtt
tgaatgagaggacaactggttgtctggagccagcccattcatctggccct
ttcatttattatagcccacagtgtcctagcttctgaccagtggatctgtt
agggatataaatcataaggctgtgctaataatgacaagtgataggccctt
tcccatatgagactggttatcagcaaaaagagcatggggaaggttgagtg
tggaaggtgacagtttgcagagggtgtcattgtgagcttagcatgagaat
taaagatattctatattcataatgtattagccattgagctggtccatgcc
tactgggatagggtgttgcttatcacctcacccagccttatggccaatgt
ctacataaccactccagttctactcttaaccccacatcctctgtgaatgg
aaccttctgtcacatctctaagctctactgtctttgtttcttttcctcac
accttctcttttgttgttcttctcttttttcttcttcccattttcgagaa
atggcccctattctgattttctgttctagccatgggtaggatcagaaatg
aatcacataacttcctcaaaatgttgaatcttcagaaatgaggaaggaaa
ggatgggttggtgttctttttttctttttttttttaacctgtaatttttt
ctttattacatatttttcctcaattacatttccaatgctattccataagg
ccccctatgcccttcccccctcccattccgttacgtttctttcctacttt
tggccctggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48360271_48361400
seq2: B6Ng01-107G15.b_45_1161

seq1  GAATTCAGTCTCCATAATTATATGGAGGTGAGGGGTAACACTAATTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCCATAATTATATGGAGGTGAGGGGTAACACTAATTTGCT  50

seq1  TTTTCCCCTATTTATGATCTAGACCTTTAGTTACTTATCCCCCCAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCTATTTATGATCTAGACCTTTAGTTACTTATCCCCCCAAAAGT  100

seq1  CCCTACCAAGCCCATGCCAGGGTTGGCAGATGGCAAACTTAGAGTCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCAAGCCCATGCCAGGGTTGGCAGATGGCAAACTTAGAGTCAGTA  150

seq1  GCATCTTGAAGCTCTCCCCAATTGCATCAGTTCCGGAACCTGAGGCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGAAGCTCTCCCCAATTGCATCAGTTCCGGAACCTGAGGCTCCT  200

seq1  AGAATTATACTAACTGCACTGAGATTTTCAAAAATTGTGCATTGTGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATACTAACTGCACTGAGATTTTCAAAAATTGTGCATTGTGCAGT  250

seq1  CAGAAGCAAACTGATATGGAAATTCACAGTGAGGCAAAATAGAAAGCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCAAACTGATATGGAAATTCACAGTGAGGCAAAATAGAAAGCATC  300

seq1  ATCTATCCTCAAAACTGCCTTTATGTTTATGATTTCATCAGGAAGGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCCTCAAAACTGCCTTTATGTTTATGATTTCATCAGGAAGGGCAA  350

seq1  AGTTATAGAAAGATAATGGTATCATTTGTTCTCAAAAGCAGGTTTATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGAAAGATAATGGTATCATTTGTTCTCAAAAGCAGGTTTATACC  400

seq1  TGTGACTACATATGACTTAAGTTAGTTTAAACACTGTAATCTCCTTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTACATATGACTTAAGTTAGTTTAAACACTGTAATCTCCTTTCAT  450

seq1  GCATTTTTAAATTTTTAATTTGTGTTTAAAATATTTAGATGGCTTCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTAAATTTTTAATTTGTGTTTAAAATATTTAGATGGCTTCCTTG  500

seq1  TGCCCATGAATAAATAATCTTATATATGCATTTTTTTTGCCCACTTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGAATAAATAATCTTATATATGCATTTTTTTTGCCCACTTAGCA  550

seq1  GGAAATGATCTATATTTTCTTTCTCTTGGTATCTTTCAAATCTCAGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGATCTATATTTTCTTTCTCTTGGTATCTTTCAAATCTCAGCTTT  600

seq1  CCTGGGATCTCTGGAGAGGAAACACAGACTTTCTTTCTGCTTGTCTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGATCTCTGGAGAGGAAACACAGACTTTCTTTCTGCTTGTCTCTTT  650

seq1  CTTGTTCCAATTCCAGATCTGTAAAGCAGTAAGACAGTGAGTGGTCCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCCAATTCCAGATCTGTAAAGCAGTAAGACAGTGAGTGGTCCTTA  700

seq1  GGAAAAAGAAAGATTTGGAAGGGGAAGCTTGGCACTATGCAGATTCCGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAAAGATTTGGAAGGGGAAGCTTGGCACTATGCAGATTCCGGA  750

seq1  AGAATGGGGAACCAGATGTTGAAGTACCCTGAGGCAAGAAATGGCTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGGAACCAGATGTTGAAGTACCCTGAGGCAAGAAATGGCTCCTG  800

seq1  GCCTCTAGCACTCACTAGTCAGTTGCCTTGCGGTACTGTGCTGGTGTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTAGCACTCACTAGTCAGTTGCCTTGCGGTACTGTGCTGGTGTATC  850

seq1  CAAGAAAAATCTTACACCAGCTCTTTCTTTCCCAGAGAACAAGCATCTAC  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAG-AAAATCTTACACCAGCTCTTTCTTTCCCAGAGAACAAGCATCTAC  899

seq1  AGTTATGAATAAAAATTCCTCCATGCTTCATCTGGAGAACTAGTATGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGAATAAAAATTCCTCCATGCTTCATCTGGAGAACTAGTATGGAG  949

seq1  GACCAAGGCTCCTTGTGATGACTGAATTCTCAAAATGAGCATGAAAGAAG  1000
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAA-GCTCCTTGTGATGACTGAATTCTCAAAATGAGCATGAAAGAAG  998

seq1  AATGAGATAGAGTGAGAGGTTGGAGGCCCAGCACTGATACAGAATGGGGC  1050
      ||||||| | ||||||| |||||||| |||||||||||||||||||||||
seq2  AATGAGAAAAAGTGAGA-GTTGGAGG-CCAGCACTGATACAGAATGGGGC  1046

seq1  AAACAGTGAAGTTCAGTGCTCAGACCACACTTAATTTTGCACAAGGTACT  1100
       ||||| ||   ||| |||   |||||||||||  |||||||| ||  ||
seq2  -AACAG-GA--GTCA-TGCCTCGACCACACTTA--TTTGCACAGGGATCT  1089

seq1  CTTAGTTACCAACGTTAGATGCTACAGCCA  1130
      ||||||||||| ||| ||  ||||||||||
seq2  CTTAGTTACCACCGTAAG--GCTACAGCCA  1117

seq1: chr2_48544564_48545421
seq2: B6Ng01-107G15.g_65_924 (reverse)

seq1  GCCAGGGCCAAAAAGTAGGAATGGGTGGGTAGGGGAGTGGG-GGGGGGGA  49
      ||||||||| |||||||||||  |    |||  ||| |||| |||||| |
seq2  GCCAGGGCC-AAAAGTAGGAA-AGAAACGTAACGGAATGGGAGGGGGGAA  48

seq1  GGGCAT-GGGGGCCTTATGGAATAGCATTGGAAATGTAATTGAGG-AAAA  97
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGCATAGGGGGCCTTATGGAATAGCATTGGAAATGTAATTGAGGAAAAA  98

seq1  TATGTAATAAAG-AAAAATTACAGGTTAAAAAAAAAAAGAAAAAAAGAAC  146
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TATGTAATAAAGAAAAAATTACAGGTTAAAAAAAAAAAGAAAAAAAGAAC  148

seq1  ACCAACCCATCCTTTCCTTCCTCATTTCTGAAGATTCAACATTTTGAGGA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCCATCCTTTCCTTCCTCATTTCTGAAGATTCAACATTTTGAGGA  198

seq1  AGTTATGTGATTCATTTCTGATCCTACCCATGGCTAGAACAGAAAATCAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGTGATTCATTTCTGATCCTACCCATGGCTAGAACAGAAAATCAG  248

seq1  AATAGGGGCCATTTCTCGAAAATGGGAAGAAGAAAAAAGAGAAGAACAAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGGCCATTTCTCGAAAATGGGAAGAAGAAAAAAGAGAAGAACAAC  298

seq1  AAAAGAGAAGGTGTGAGGAAAAGAAACAAAGACAGTAGAGCTTAGAGATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAGGTGTGAGGAAAAGAAACAAAGACAGTAGAGCTTAGAGATG  348

seq1  TGACAGAAGGTTCCATTCACAGAGGATGTGGGGTTAAGAGTAGAACTGGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAAGGTTCCATTCACAGAGGATGTGGGGTTAAGAGTAGAACTGGA  398

seq1  GTGGTTATGTAGACATTGGCCATAAGGCTGGGTGAGGTGATAAGCAACAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATGTAGACATTGGCCATAAGGCTGGGTGAGGTGATAAGCAACAC  448

seq1  CCTATCCCAGTAGGCATGGACCAGCTCAATGGCTAATACATTATGAATAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCCAGTAGGCATGGACCAGCTCAATGGCTAATACATTATGAATAT  498

seq1  AGAATATCTTTAATTCTCATGCTAAGCTCACAATGACACCCTCTGCAAAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCTTTAATTCTCATGCTAAGCTCACAATGACACCCTCTGCAAAC  548

seq1  TGTCACCTTCCACACTCAACCTTCCCCATGCTCTTTTTGCTGATAACCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCTTCCACACTCAACCTTCCCCATGCTCTTTTTGCTGATAACCAG  598

seq1  TCTCATATGGGAAAGGGCCTATCACTTGTCATTATTAGCACAGCCTTATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATGGGAAAGGGCCTATCACTTGTCATTATTAGCACAGCCTTATG  648

seq1  ATTTATATCCCTAACAGATCCACTGGTCAGAAGCTAGGACACTGTGGGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATCCCTAACAGATCCACTGGTCAGAAGCTAGGACACTGTGGGCT  698

seq1  ATAATAAATGAAAGGGCCAGATGAATGGGCTGGCTCCAGACAACCAGTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATGAAAGGGCCAGATGAATGGGCTGGCTCCAGACAACCAGTTG  748

seq1  TCCTCTCATTCAAACCCTGCTCACATGAGGCAGAGGCCCAAATCAGTAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCATTCAAACCCTGCTCACATGAGGCAGAGGCCCAAATCAGTAAT  798

seq1  TCTCTGGTGCTAAGATCTCTCCACACTTCAGCTCTTCATCTGTTGCCGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTGCTAAGATCTCTCCACACTTCAGCTCTTCATCTGTTGCCGCT  848

seq1  AGGTTTGAATTC  858
      ||||||||||||
seq2  AGGTTTGAATTC  860