BAC Information

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BAC

Clone NameB6Ng01-107J05
Chromosome2 (Build37)
Map Location 166,662,858 - 166,859,479
singlet/doubletdoublet
Overlap geneArfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27
Upstream genePrkcbp1, LOC546780, Ncoa3, Sulf2, LOC670775, Ppia-ps2_2197.1, BC067047, Trp53rk
Downstream geneAI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1, AI840826, Cebpb, LOC100043728, Ptpn1, 2310033K02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107J05.bB6Ng01-107J05.g
ACCDH915005DH915006
length1,001759
definitionDH915005|Mus musculus domesticus DNA, BAC clone: B6Ng01-107J05, 5' end.DH915006|Mus musculus domesticus DNA, BAC clone: B6Ng01-107J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(166,662,858 - 166,663,856)(166,858,721 - 166,859,479)
sequence
gaattcactctgtagaccaggctggcctcgaactcagaaatccacctgcc
cctgcctcccaaatgctgggattaaaggcgtgcaccaccacgcccggcca
gattggacatcttaaagtgcagtaataattgtagctgagcaaacagaaga
gttgtcctctttgggctgcagcagactgctttctctttgttatgttccgg
gcgcagcatgagtgaggtcccaacctcccctatgcaaaaccctctgataa
ttccccattcctattctctaccaatcagagcaaaagctatgccctccctt
ccctgattgcttgcagagccttgtgagactgagccctgcccacttctctg
tccttttctttaaatttaaaatttcccctttcccctttttatcccctccc
acccctgcctttctgtgtggtatatctgcatgtatttgggatgtgcacct
gcagaggccagaggatggcatcaagtgtcctcctctgtcagttcctattc
ctttgtccccagagtaccagaaaggtccagcaatcacccagtctcctgca
tccacttctggagtattaggattgcaggtgtggaccctcattgctacttt
atgtagtgcttggggttagacccagggctatattgtttgtttgttgtttt
tggatttttgagacagggtctctctgcagaaccctggctgtcctggactg
cacactatgtaaacaaggctgggctccaactcacagagatctccttgcct
ctgcctactttgtgctaggattaaaggcacacactaccacacctggcctt
tgtttgtctttttttttcttttttttttttttttttcgagacagggtttt
tctgtgtaagccctggctgtcctggaactcactctgtagaccaaggctgg
cctcgaactcaaaaatccacctgcctcctgcttcccaagtgctggattaa
aggcgtgcaccatcacgcccggcttgtttgtctttataagcacatccttc
c
gaattccagaatccatggagggccaggttcaaggatacatcccagttcct
ccaaagcttgatcactgccatccctgccagctcttgccatggtgcgagcc
tcagaatggacaccctatcacttaccagggcctgtaggctcgtcctcagg
cattgcccgtgctcgcttggttctgcgattcctcttggccagccgctctg
caaacatctgtgccttgaggatttcaaactgggacctctcctctgcctgg
gggcagagtgagggatgagcacagaacacaccagtgcttcatgggaccct
actccacagggaggccactcaccgtcatctccccctttttcttggcatcc
ttcataaacttcttccttttcttctttcctcttaaggccaagtcaaactc
ctgtagagccttagcaactagagtgaggacagagtgtggaatttaggggc
tatttgattatgtcattaaagcttaaaatgagaaggaactagaggtgaca
gctcactgagtaaagtacccttcagggaagactgagggcctgggcaggac
tgctcccttaatggttgctgggagaaggggaattgaggttttcagtggtg
cagccactggcaaggtgaccctgttcaagagaatcatcccactcatgctc
atgtcagagacttcactaaatgcagcagccttgaaaagagacttcaagtc
aggaaggagcttgctggaaagacactcagcatcaaaggtgagggtggtgg
ggaagggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_166662858_166663856
seq2: B6Ng01-107J05.b_45_1045

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCC  50

seq1  CCTGCCTCCCAAATGCTGGGATTAAAGGCGTGCACCACCACGCCCGGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCCCAAATGCTGGGATTAAAGGCGTGCACCACCACGCCCGGCCA  100

seq1  GATTGGACATCTTAAAGTGCAGTAATAATTGTAGCTGAGCAAACAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGACATCTTAAAGTGCAGTAATAATTGTAGCTGAGCAAACAGAAGA  150

seq1  GTTGTCCTCTTTGGGCTGCAGCAGACTGCTTTCTCTTTGTTATGTTCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCCTCTTTGGGCTGCAGCAGACTGCTTTCTCTTTGTTATGTTCCGG  200

seq1  GCGCAGCATGAGTGAGGTCCCAACCTCCCCTATGCAAAACCCTCTGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAGCATGAGTGAGGTCCCAACCTCCCCTATGCAAAACCCTCTGATAA  250

seq1  TTCCCCATTCCTATTCTCTACCAATCAGAGCAAAAGCTATGCCCTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCATTCCTATTCTCTACCAATCAGAGCAAAAGCTATGCCCTCCCTT  300

seq1  CCCTGATTGCTTGCAGAGCCTTGTGAGACTGAGCCCTGCCCACTTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATTGCTTGCAGAGCCTTGTGAGACTGAGCCCTGCCCACTTCTCTG  350

seq1  TCCTTTTCTTTAAATTTAAAATTTCCCCTTTCCCCTTTTTATCCCCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCTTTAAATTTAAAATTTCCCCTTTCCCCTTTTTATCCCCTCCC  400

seq1  ACCCCTGCCTTTCTGTGTGGTATATCTGCATGTATTTGGGATGTGCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGCCTTTCTGTGTGGTATATCTGCATGTATTTGGGATGTGCACCT  450

seq1  GCAGAGGCCAGAGGATGGCATCAAGTGTCCTCCTCTGTCAGTTCCTATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCCAGAGGATGGCATCAAGTGTCCTCCTCTGTCAGTTCCTATTC  500

seq1  CTTTGTCCCCAGAGTACCAGAAAGGTCCAGCAATCACCCAGTCTCCTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCCCCAGAGTACCAGAAAGGTCCAGCAATCACCCAGTCTCCTGCA  550

seq1  TCCACTTCTGGAGTATTAGGATTGCAGGTGTGGACCCTCATTGCTACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTGGAGTATTAGGATTGCAGGTGTGGACCCTCATTGCTACTTT  600

seq1  ATGTAGTGCTTGGGGTTAGACCCAGGGCTATATTGTTTGTTTGTTGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTGCTTGGGGTTAGACCCAGGGCTATATTGTTTGTTTGTTGTTTT  650

seq1  TGGATTTTTGAGACAGGGTCTCTCTGCAGAACCCTGGCTGTCCTGGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTTGAGACAGGGTCTCTCTGCAGAACCCTGGCTGTCCTGGACTG  700

seq1  CACACTATGTAAACAAGGCTGGGCTCCAACTCACAGAGATCTCCTTGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTATGTAAACAAGGCTGGGCTCCAACTCACAGAGATCTCCTTGCCT  750

seq1  CTGCCTACTTTGTGCTAGGATTAAAGGCACACACTACCACACCTGGCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTACTTTGTGCTAGGATTAAAGGCACACACTACCACACCTGGCCTT  800

seq1  TGTTTGTCTTTTTTTTTC-TTTTTTTTTTTTTTTTTCGAGACAGGGTTTT  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGTTTGTCTTTTTTTTTCTTTTTTTTTTTTTTTTTTCGAGACAGGGTTTT  850

seq1  TCTGTGT-AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACC-AGGCTGG  897
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  TCTGTGTAAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAAGGCTGG  900

seq1  CCTCGAACTCAGAAATCCACCTGCCT-CTGCTTCCCAAGTGCTGGGATTA  946
      ||||||||||| |||||||||||||| |||||||||||||||| ||||||
seq2  CCTCGAACTCAAAAATCCACCTGCCTCCTGCTTCCCAAGTGCT-GGATTA  949

seq1  AAGGCGTGCACCACCACGCCCGGCTTGTTTGTCTTTTATAAGCACATCGT  996
      ||||||||||||| ||||||||||||||||||| |||||||||||||| |
seq2  AAGGCGTGCACCATCACGCCCGGCTTGTTTGTC-TTTATAAGCACATCCT  998

seq1  TCC  999
      |||
seq2  TCC  1001

seq1: chr2_166858721_166859479
seq2: B6Ng01-107J05.g_69_827 (reverse)

seq1  GTCCCTTCCCCACCACCCTCACCTTTGGTGCTGAGTGTCTTTCCAGCAAG  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTCCCTTCCCCACCACCCTCACCTTTGATGCTGAGTGTCTTTCCAGCAAG  50

seq1  CTCCTTCCTGACTTGAAGTCTCTTTTCAAGGCTGCTGCATTTAGTGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCTGACTTGAAGTCTCTTTTCAAGGCTGCTGCATTTAGTGAAGT  100

seq1  CTCTGACATGAGCATGAGTGGGATGATTCTCTTGAACAGGGTCACCTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACATGAGCATGAGTGGGATGATTCTCTTGAACAGGGTCACCTTGC  150

seq1  CAGTGGCTGCACCACTGAAAACCTCAATTCCCCTTCTCCCAGCAACCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCTGCACCACTGAAAACCTCAATTCCCCTTCTCCCAGCAACCATT  200

seq1  AAGGGAGCAGTCCTGCCCAGGCCCTCAGTCTTCCCTGAAGGGTACTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGCAGTCCTGCCCAGGCCCTCAGTCTTCCCTGAAGGGTACTTTAC  250

seq1  TCAGTGAGCTGTCACCTCTAGTTCCTTCTCATTTTAAGCTTTAATGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGCTGTCACCTCTAGTTCCTTCTCATTTTAAGCTTTAATGACAT  300

seq1  AATCAAATAGCCCCTAAATTCCACACTCTGTCCTCACTCTAGTTGCTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATAGCCCCTAAATTCCACACTCTGTCCTCACTCTAGTTGCTAAG  350

seq1  GCTCTACAGGAGTTTGACTTGGCCTTAAGAGGAAAGAAGAAAAGGAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACAGGAGTTTGACTTGGCCTTAAGAGGAAAGAAGAAAAGGAAGAA  400

seq1  GTTTATGAAGGATGCCAAGAAAAAGGGGGAGATGACGGTGAGTGGCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGAAGGATGCCAAGAAAAAGGGGGAGATGACGGTGAGTGGCCTCC  450

seq1  CTGTGGAGTAGGGTCCCATGAAGCACTGGTGTGTTCTGTGCTCATCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAGTAGGGTCCCATGAAGCACTGGTGTGTTCTGTGCTCATCCCTC  500

seq1  ACTCTGCCCCCAGGCAGAGGAGAGGTCCCAGTTTGAAATCCTCAAGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCCCCCAGGCAGAGGAGAGGTCCCAGTTTGAAATCCTCAAGGCAC  550

seq1  AGATGTTTGCAGAGCGGCTGGCCAAGAGGAATCGCAGAACCAAGCGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTGCAGAGCGGCTGGCCAAGAGGAATCGCAGAACCAAGCGAGCA  600

seq1  CGGGCAATGCCTGAGGACGAGCCTACAGGCCCTGGTAAGTGATAGGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCAATGCCTGAGGACGAGCCTACAGGCCCTGGTAAGTGATAGGGTGT  650

seq1  CCATTCTGAGGCTCGCACCATGGCAAGAGCTGGCAGGGATGGCAGTGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGAGGCTCGCACCATGGCAAGAGCTGGCAGGGATGGCAGTGATC  700

seq1  AAGCTTTGGAGGAACTGGGATGTATCCTTGAACCTGGCCCTCCATGGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTGGAGGAACTGGGATGTATCCTTGAACCTGGCCCTCCATGGATT  750

seq1  CTGGAATTC  759
      |||||||||
seq2  CTGGAATTC  759